Contig 009972:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN028E18Sequence548009972 (3)ref|XP_006341569.1|6e-15PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Solanum tubero
JMFS145C11Sequence532009972 (3)ref|XP_006341569.1|5e-15PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Solanum tubero
JMSF023I02Sequence656006522 (2)ref|XP_010322623.1|1e-95PREDICTED: serine/threonine-protein kinase EDR1-like isoform X3 [Solanum lycope752009972 (3)ref|XP_006341570.1|3e-57PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Solanum tubero

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023I02+ AGCAGGGACGGCGGAGTGGATGGCACCAGAAG
                      ____________________________________________________________
consensus AGCAGGGACGGCGGAGTGGATGGCACCAGAAG
 
. : . : . : . : . : . :
rJMSF023I02+ TGCTGCGAAATGAGCCTTCGGATGAGAAATGTGACGTATATAGCTATGGCGTCATACTAT
                      ____________________________________________________________
consensus TGCTGCGAAATGAGCCTTCGGATGAGAAATGTGACGTATATAGCTATGGCGTCATACTAT
 
. : . : . : . : . : . :
rJMSF023I02+ GGGAGCTTTGCACGTTGCAGCAACCATGGGGAGGGATGAACCCGATGCAAGTTGTGGGTG
                      ____________________________________________________________
consensus GGGAGCTTTGCACGTTGCAGCAACCATGGGGAGGGATGAACCCGATGCAAGTTGTGGGTG
 
. : . : . : . : . : . :
JMFN028E18- CGGACGACATGGATCCTGCCATTGCGG
JMFS145C11+ CGGACGACATGGATCCTGCCATTGCGG
rJMSF023I02+ CCGTTGGATTTCAGCACCGTCGTCTAGACATACCGGACGACATGGATCCTGCCATTGCGG
                      ____________________________________________________________
consensus CCGTTGGATTTCAGCACCGTCGTCTAGACATACCGGACGACATGGATCCTGCCATTGCGG
 
. : . : . : . : . : . :
JMFN028E18- ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
JMFS145C11+ ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
rJMSF023I02+ ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
                      ____________________________________________________________
consensus ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
 
. : . : . : . : . : . :
JMFN028E18- TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
JMFS145C11+ TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
rJMSF023I02+ TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
                      ____________________________________________________________
consensus TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
 
. : . : . : . : . : . :
JMFN028E18- CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
JMFS145C11+ CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
rJMSF023I02+ CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
                      ____________________________________________________________
consensus CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
 
. : . : . : . : . : . :
JMFN028E18- TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
JMFS145C11+ TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
rJMSF023I02+ TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
                      ____________________________________________________________
consensus TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
 
. : . : . : . : . : . :
JMFN028E18- AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
JMFS145C11+ AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
rJMSF023I02+ AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
                      ____________________________________________________________
consensus AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
 
. : . : . : . : . : . :
JMFN028E18- ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
JMFS145C11+ ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
rJMSF023I02+ ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
                      ____________________________________________________________
consensus ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
 
. : . : . : . : . : . :
JMFN028E18- TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
JMFS145C11+ TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
rJMSF023I02+ TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
                      ____________________________________________________________
consensus TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
 
. : . : . : . : . : . :
JMFN028E18- TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
JMFS145C11+ TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
rJMSF023I02+ TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
                      ____________________________________________________________
consensus TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
 
. : . : . : . : . : . :
JMFN028E18- TTTTGAGTTTTGAGGGTATAATCAACCTTTGCTTATCTA
JMFS145C11+ TTTTGAGTTTTGAGGGTAT
rJMSF023I02+ TTTTGAGTTTTGAGGGTATAATCAACCTTTGCTTATCTATCCCATGCAAGGATATGATCT
                      ____________________________________________________________
consensus TTTTGAGTTTTGAGGGTATAATCAACCTTTGCTTATCTATCCCATGCAAGGATATGATCT