Contig 009964:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022G21Sequence673009964 (2)ref|XP_009772548.1|2e-78PREDICTED: B3 domain-containing protein At5g42700-like isoform X1 [Nicotiana sy765009964 (2)ref|XP_009772550.1|6e-22PREDICTED: B3 domain-containing protein At5g42700-like isoform X2 [Nicotiana sy

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF022G21- GATACG
                      ____________________________________________________________
consensus GATACG
 
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JMSF022G21- ACTACCTGGTACTTCTGCTAGTGAGAGAAAGTCCAAAAGACAACCATGGAAACTAAGCAC
                      ____________________________________________________________
consensus ACTACCTGGTACTTCTGCTAGTGAGAGAAAGTCCAAAAGACAACCATGGAAACTAAGCAC
 
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JMSF022G21- TCGAATGTTAAACGACCTGTCTCCGAAATCTGTTCGCACAAAGTACGGCTTTCTCATTCT
                      ____________________________________________________________
consensus TCGAATGTTAAACGACCTGTCTCCGAAATCTGTTCGCACAAAGTACGGCTTTCTCATTCT
 
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JMSF022G21- CTGTCCACATCGACGCCCGCAGCTTCTTCCTCTAAGACTAAGAGGAAGATGCCATTGGAG
                      ____________________________________________________________
consensus CTGTCCACATCGACGCCCGCAGCTTCTTCCTCTAAGACTAAGAGGAAGATGCCATTGGAG
 
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JMSF022G21- AGCAAGGAAAAGCTAGTTTCTAAAAAGCGTAAAATTCTCAAATCTAAGGCTAAACAAGAA
                      ____________________________________________________________
consensus AGCAAGGAAAAGCTAGTTTCTAAAAAGCGTAAAATTCTCAAATCTAAGGCTAAACAAGAA
 
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JMSF022G21- AAATCTAATAATCCCAAAAAATCAGAGAGCATTAAACGAAAAAGGGCTACATTTAGTGAC
                      ____________________________________________________________
consensus AAATCTAATAATCCCAAAAAATCAGAGAGCATTAAACGAAAAAGGGCTACATTTAGTGAC
 
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JMSF022G21- ATGTACGATGATGTTGAAGCTAAGTTCTCTGTTTTGGAGCGAGCAGAAAGGGTGCTGTCG
                      ____________________________________________________________
consensus ATGTACGATGATGTTGAAGCTAAGTTCTCTGTTTTGGAGCGAGCAGAAAGGGTGCTGTCG
 
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JMSF022G21- AGTCTATCAGATGAATTCCCTAGCTTTATAAAGTGTATGCTGCCATCAAATGTTGCTCAT
                      ____________________________________________________________
consensus AGTCTATCAGATGAATTCCCTAGCTTTATAAAGTGTATGCTGCCATCAAATGTTGCTCAT
 
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JMSF022G21- GGGTTTTGGCTGCATCTTCCAAAGGCATTCTGTGACATGTATCTTCCGACTTGTGACACC
                      ____________________________________________________________
consensus GGGTTTTGGCTGCATCTTCCAAAGGCATTCTGTGACATGTATCTTCCGACTTGTGACACC
 
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JMSF022G21- AATATTATATTGGTAGATGAATGGGGAAATGAATACAAAACGTCTTATCTTCTGGAAAGG
                      ____________________________________________________________
consensus AATATTATATTGGTAGATGAATGGGGAAATGAATACAAAACGTCTTATCTTCTGGAAAGG
 
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JMSF022G21- CATGGATTAAGCGCTGGCTGGAGAGCATTTTCAATCTCTCACAGATTACTCAAAGGGGAT
                      ____________________________________________________________
consensus CATGGATTAAGCGCTGGCTGGAGAGCATTTTCAATCTCTCACAGATTACTCAAAGGGGAT
 
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JMSF022G21- ATTTTGATCTTTCGTCTGATTGAGCCATGCAAACTAAAGGTAGACATAGTAAGGGTAAAT
rJMSF022G21+ CTGATTGAGCCATGCAAACTAAAGGTAGACATAGTAAGGGTAAAT
                      ____________________________________________________________
consensus ATTTTGATCTTTCGTCTGATTGAGCCATGCAAACTAAAGGTAGACATAGTAAGGGTAAAT
 
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JMSF022G21- GGTCGAG
rJMSF022G21+ GGTCGAGATGTGGTAGATGCTGCTCTTTGCCTCTTGAAATTTGATGCTAGTGTGAACACA
                      ____________________________________________________________
consensus GGTCGAGATGTGGTAGATGCTGCTCTTTGCCTCTTGAAATTTGATGCTAGTGTGAACACA
 
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rJMSF022G21+ ACGGATCCGGATCTTTCACGGAAAGACACTCGCAAGCGTAAAAGCTTAGTGAAATTCATA
                      ____________________________________________________________
consensus ACGGATCCGGATCTTTCACGGAAAGACACTCGCAAGCGTAAAAGCTTAGTGAAATTCATA
 
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rJMSF022G21+ GAGCCTTACATCCATAATGTTTGTAAACCTGAGGCAAATGTTCAAGTTGAAGGCCAGAGT
                      ____________________________________________________________
consensus GAGCCTTACATCCATAATGTTTGTAAACCTGAGGCAAATGTTCAAGTTGAAGGCCAGAGT
 
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rJMSF022G21+ GCATTGGATTGTTGCTCTCCAAACATTGTGGATCAAGCTGAACATAATAGTAAAGATTCA
                      ____________________________________________________________
consensus GCATTGGATTGTTGCTCTCCAAACATTGTGGATCAAGCTGAACATAATAGTAAAGATTCA
 
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rJMSF022G21+ GGGTCTGAAGATTTCAAAGGTATGACCTTGCAGGACTCATCTTTGTTTATGCACAAAAAC
                      ____________________________________________________________
consensus GGGTCTGAAGATTTCAAAGGTATGACCTTGCAGGACTCATCTTTGTTTATGCACAAAAAC
 
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rJMSF022G21+ TCCAAAACTTGTTATCTTGTCTGTGTGATCCCATTTTAGGTTCTGATATTGCCAACCACC
                      ____________________________________________________________
consensus TCCAAAACTTGTTATCTTGTCTGTGTGATCCCATTTTAGGTTCTGATATTGCCAACCACC
 
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rJMSF022G21+ CGCAATCCAATGAGTTCTGCAGCTCCAAAACTTCGTTTTTGTGCGACCATCCCCGTGATG
                      ____________________________________________________________
consensus CGCAATCCAATGAGTTCTGCAGCTCCAAAACTTCGTTTTTGTGCGACCATCCCCGTGATG
 
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rJMSF022G21+ GGGTAGCTTGTAGATAGATTGCTATAAAAGAAAGTGCATCTACAGAGGTTGGAATTGATT
                      ____________________________________________________________
consensus GGGTAGCTTGTAGATAGATTGCTATAAAAGAAAGTGCATCTACAGAGGTTGGAATTGATT
 
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rJMSF022G21+ GAAGCTCAAAAATCAATTGATTTTGCTTCTTCGTGTTACAAGGAAAGCTTCTGAGGGGTG
                      ____________________________________________________________
consensus GAAGCTCAAAAATCAATTGATTTTGCTTCTTCGTGTTACAAGGAAAGCTTCTGAGGGGTG
 
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rJMSF022G21+ CGTGACGGTTGGGCTCAGTTTTGCAGGAAAACACAGCAAAGAGCCAAAGACTACCTCGGA
                      ____________________________________________________________
consensus CGTGACGGTTGGGCTCAGTTTTGCAGGAAAACACAGCAAAGAGCCAAAGACTACCTCGGA
 
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rJMSF022G21+ GAGAGAATCTTGGCTGAACCATCTTAAGTGTTTTGGTTTTTGAAACAGTATGGGTTTTTG
                      ____________________________________________________________
consensus GAGAGAATCTTGGCTGAACCATCTTAAGTGTTTTGGTTTTTGAAACAGTATGGGTTTTTG
 
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rJMSF022G21+ GTAAAGAATACTGTACATCACCCTCCTGTTTAGAGGTAATATATTGTATATACCAGTCAA
                      ____________________________________________________________
consensus GTAAAGAATACTGTACATCACCCTCCTGTTTAGAGGTAATATATTGTATATACCAGTCAA