Contig 009952:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019H04Sequence255009952 (2)762009952 (2)ref|XP_006353400.1|4e-88PREDICTED: protein LURP-one-related 14-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF019H04- GGAGTTCAAATT
                      ____________________________________________________________
consensus GGAGTTCAAATT
 
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JMSF019H04- AGTCAAACCTCACACAGACAAGATGAAGTTTCGTTGAAGATTTGGATGATCACTCTTCTC
                      ____________________________________________________________
consensus AGTCAAACCTCACACAGACAAGATGAAGTTTCGTTGAAGATTTGGATGATCACTCTTCTC
 
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JMSF019H04- CATTCTACACGCCCTTTTCCGCCTCTCCCTTAATCAAATCAAAAACCCTTCGATTCTCTG
                      ____________________________________________________________
consensus CATTCTACACGCCCTTTTCCGCCTCTCCCTTAATCAAATCAAAAACCCTTCGATTCTCTG
 
. : . : . : . : . : . :
JMSF019H04- CTATGATTTTCTTAGTTTTCTGCTAGACGGAACCTTAAACCTTAAACAGTTCGTTTTTTG
rJMSF019H04+ AACCTTAAACAGTTCGTTTTTTG
                      ____________________________________________________________
consensus CTATGATTTTCTTAGTTTTCTGCTAGACGGAACCTTAAACCTTAAACAGTTCGTTTTTTG
 
. : . : . : . : . : . :
JMSF019H04- GAAACGTTTTTCAATGTTCAAACCTGAGATAAGGCACGATGTTCCTCTCATCCCTGTCGT
rJMSF019H04+ GAAACGTTTTTCAATGTTCAAACCTGAGATAAGGCACGATGTTCCTCTCATCCCTGTCGT
                      ____________________________________________________________
consensus GAAACGTTTTTCAATGTTCAAACCTGAGATAAGGCACGATGTTCCTCTCATCCCTGTCGT
 
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JMSF019H04- CGG
rJMSF019H04+ CGGCGACGCCTTCTGCTTCCCTTACCTCGTTGACTTGACTGTCAGGAAGGGGATCCTCGG
                      ____________________________________________________________
consensus CGGCGACGCCTTCTGCTTCCCTTACCTCGTTGACTTGACTGTCAGGAAGGGGATCCTCGG
 
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rJMSF019H04+ CGTCACCGGATTGCGCTTCGATGTCTCCGATGATAACGGCGGTTCTCTCCTCGGAGTCCA
                      ____________________________________________________________
consensus CGTCACCGGATTGCGCTTCGATGTCTCCGATGATAACGGCGGTTCTCTCCTCGGAGTCCA
 
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rJMSF019H04+ CGGGAAGCTCTGGCAGTTCCGGCGGAAAAAACGAACCATTTCCGATCCCTCCGGCTTCCC
                      ____________________________________________________________
consensus CGGGAAGCTCTGGCAGTTCCGGCGGAAAAAACGAACCATTTCCGATCCCTCCGGCTTCCC
 
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rJMSF019H04+ GATCCTCACTATGCGCTCAAAGGTTCTTGCACTGAGAAATGTGTGGTCTGTTTACAAAGG
                      ____________________________________________________________
consensus GATCCTCACTATGCGCTCAAAGGTTCTTGCACTGAGAAATGTGTGGTCTGTTTACAAAGG
 
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rJMSF019H04+ AGAGAGTTCAGATGAAAATGATGTGATATACAGTGTTCAAGAATCTAAAGTTCTTCAGAT
                      ____________________________________________________________
consensus AGAGAGTTCAGATGAAAATGATGTGATATACAGTGTTCAAGAATCTAAAGTTCTTCAGAT
 
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rJMSF019H04+ GAAAATCAGACTTGATGTTTTCATGGCTGGCAACAGGGGAGAGATCTGTAATTTCCATGT
                      ____________________________________________________________
consensus GAAAATCAGACTTGATGTTTTCATGGCTGGCAACAGGGGAGAGATCTGTAATTTCCATGT
 
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rJMSF019H04+ TAAGGGCTCCTACACTTCTCAGAACTTCAAAGTCTACAAAGGAGATACTTTGATTGCCGA
                      ____________________________________________________________
consensus TAAGGGCTCCTACACTTCTCAGAACTTCAAAGTCTACAAAGGAGATACTTTGATTGCCGA
 
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rJMSF019H04+ GGTGAAGGAGAAAGTGAAGATAGGTTACTTCTTTAAGGGCATAGAGAAGTTTGAAGTAAG
                      ____________________________________________________________
consensus GGTGAAGGAGAAAGTGAAGATAGGTTACTTCTTTAAGGGCATAGAGAAGTTTGAAGTAAG
 
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rJMSF019H04+ AGTCTATCCTGGCGCCGATTATGCTTTCGTTGTATCGCTACTCGTAATACTAAACGATAT
                      ____________________________________________________________
consensus AGTCTATCCTGGCGCCGATTATGCTTTCGTTGTATCGCTACTCGTAATACTAAACGATAT
 
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rJMSF019H04+ TGATGGAGGGTCATGAGTGCTTTGGTTTTAATCCTTACACAAGAAAAATAAAATACAAAA
                      ____________________________________________________________
consensus TGATGGAGGGTCATGAGTGCTTTGGTTTTAATCCTTACACAAGAAAAATAAAATACAAAA
 
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rJMSF019H04+ AATCGTATATGTGAAATTACAGTTTTGGACAGTGCTGACAAGGCTTTTGTTACAGAATCT
                      ____________________________________________________________
consensus AATCGTATATGTGAAATTACAGTTTTGGACAGTGCTGACAAGGCTTTTGTTACAGAATCT