Contig 009929:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D10Sequence583009929 (36)ref|XP_009780966.1|1e-22PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana 643009929 (36)ref|XP_011071173.1|7e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMFF032D21Sequence615009929 (36)ref|XP_009780966.1|2e-32PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana 693009929 (36)ref|XP_011071173.1|4e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMFF050I13Sequence627009929 (36)599009929 (36)ref|XP_004142959.1|4e-33PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Cucum
JMFN006L24Sequence621009929 (36)ref|XP_009780966.1|4e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN007O07Sequence615009929 (36)ref|XP_009780966.1|4e-45PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN008B10Sequence627009929 (36)ref|XP_011071173.1|3e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMFN009E11Sequence642009929 (36)ref|XP_011071173.1|3e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMFN010I08Sequence625009929 (36)ref|XP_009780966.1|6e-52PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN011K09Sequence612009929 (36)ref|XP_008444395.1|3e-35PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Cucumis me
JMFN014H15Sequence614009929 (36)ref|XP_009780966.1|1e-37PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN015P02Sequence596009929 (36)ref|XP_009780966.1|1e-40PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN016G22Sequence612009929 (36)ref|XP_009780966.1|5e-40PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN016N11Sequence605009929 (36)ref|XP_007044927.1|1e-45Photosystem II core complex proteins psbY [Theobroma cacao] gb|EOY00759.1| Photo
JMFN017P09Sequence632009929 (36)ref|XP_009780966.1|5e-41PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN018I13Sequence641009929 (36)ref|XP_009780966.1|2e-50PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN019N23Sequence627009929 (36)ref|XP_009780966.1|5e-37PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN025C23Sequence626009929 (36)ref|XP_007044927.1|2e-45Photosystem II core complex proteins psbY [Theobroma cacao] gb|EOY00759.1| Photo
JMFN033L16Sequence618009929 (36)ref|XP_009780966.1|8e-37PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN035P06Sequence644009929 (36)ref|XP_009780966.1|2e-35PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN036B15Sequence594009929 (36)ref|XP_009780966.1|1e-42PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMFN036D02Sequence545009929 (36)ref|XP_011071173.1|3e-32PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMFN036L20Sequence532009929 (36)ref|XP_008444395.1|1e-26PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Cucumis me
JMFN038C14Sequence613009929 (36)ref|XP_009780966.1|5e-35PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana
JMSF002N12Sequence281009929 (36)ref|XP_009780966.1|7e-04PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana 700009929 (36)ref|XP_011071173.1|3e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMSF015D21Sequence255002165 (4)736009929 (36)ref|XP_009797447.1|5e-58PREDICTED: auxin response factor 9-like [Nicotiana sylvestris]
JMSF019E19Sequence250009929 (36)ref|XP_009780966.1|3e-09PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana 674009929 (36)ref|XP_011071173.1|5e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMSF029N07Sequence607013412 (2)gb|KDP28473.1|2e-31hypothetical protein JCGZ_14244 [Jatropha curcas]749009929 (36)ref|XP_009797447.1|1e-57PREDICTED: auxin response factor 9-like [Nicotiana sylvestris]
JMSF034P04Sequence697009929 (36)ref|XP_011071173.1|2e-27PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam700009929 (36)ref|XP_011071173.1|7e-47PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam
JMSF036N13Sequence660013412 (2)gb|KDP28473.1|4e-62hypothetical protein JCGZ_14244 [Jatropha curcas]750009929 (36)ref|XP_009797447.1|1e-44PREDICTED: auxin response factor 9-like [Nicotiana sylvestris]
JMSF042K17Sequence412011650 (27)ref|XP_009796885.1|2e-79PREDICTED: methionine gamma-lyase-like [Nicotiana sylvestris]758009929 (36)ref|XP_009797447.1|5e-58PREDICTED: auxin response factor 9-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF050I13- CCTTAT
                      ____________________________________________________________
consensus CCTTAT
 
. : . : . : . : . : . :
rJMFF050I13- GGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTGGTTTAAGATTTGTTTATTTCCTTT
                      ____________________________________________________________
consensus GGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTGGTTTAAGATTTGTTTATTTCCTTT
 
. : . : . : . : . : . :
rJMFF050I13- TCAATGAAGTATCACACATAGATTTCAAGAATCACCAGAGTAATTAAGCTGGTCTTCAAA
                      ____________________________________________________________
consensus TCAATGAAGTATCACACATAGATTTCAAGAATCACCAGAGTAATTAAGCTGGTCTTCAAA
 
. : . : . : . : . : . :
rJMFF050I13- AAAGAAAAAGTTGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
JMFN025C23+ TGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
JMFN016N11+ TGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
rJMFF013D10- TGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
JMFN008B10+ ATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
rJMFF032D21- ATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
rJMSF002N12- CAAAATACTTGGGAAGTACATGTAAAGCA
JMFN035P06+ GTAAAGCA
rJMSF019E19- AATACTTGGGAAGTACATGTAAAGCA
JMFN009E11+ GGAAGTACATGTAAAGCA
JMFN010I08+ GTACATGTAAAGCA
JMFN018I13+ TGGGAAGTACATGTAAAGCA
rJMSF034P04- AAAATACTTGGGAAGTACATGTAAAGCA
                      ____________________________________________________________
consensus AAAGAAAAAGTTGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
 
. : . : . : . : . : . :
rJMFF050I13- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN025C23+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN016N11+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
rJMFF013D10- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN008B10+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
rJMFF032D21- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFF032D21+ GGTTCAGAGCAGGCTGCAAAATGTTGTA
rJMSF002N12- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN035P06+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTT-TA
rJMSF019E19- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN009E11+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN010I08+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN018I13+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN006L24+ TGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN014H15+ ATGTTGTA
JMFN016G22+ GCAGGCTGCANAATGTTGTA
JMFN007O07+ AGCAGGCTGCANAATGTTGTA
JMFN033L16+ TCAGAGCAGGCTGCAAAATG-TGTA
JMFN036B15+ GGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN015P02+ AGCAGGCTGCANAATGTTGTA
JMFN011K09+ TTCAGAGCAGGCTGCAAAATGTTGTA
JMFN017P09+ TCAGAGCAGGCTGCANAATGTTGTA
rJMSF034P04- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN019N23+ TGTTGTA
                      ____________________________________________________________
consensus GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
 
. : . : . : . : . : . :
rJMFF050I13- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN025C23+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN016N11+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMFF013D10- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN008B10+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMFF032D21- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFF032D21+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMSF002N12- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN035P06+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMSF019E19- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN009E11+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN036D02+ CGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN010I08+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN018I13+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN006L24+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN014H15+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN016G22+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN007O07+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN033L16+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN036B15+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN015P02+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN011K09+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN017P09+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN036L20+ GATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMSF034P04- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN038C14+ CCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN019N23+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
                      ____________________________________________________________
consensus ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
 
. : . : . : . : . : . :
rJMFF050I13- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN025C23+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN016N11+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMFF013D10- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN008B10+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMFF032D21- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGAAGCTGATGCGGCGTAGGGGTGAATGAA
JMFF032D21+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGAAGCTGATGCGGCGTAGGGGTGAATGAA
rJMSF002N12- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN035P06+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMSF019E19- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN009E11+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN036D02+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN010I08+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN018I13+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN006L24+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN014H15+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN016G22+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN007O07+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN033L16+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN036B15+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN015P02+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN011K09+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN017P09+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN036L20+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMSF034P04- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN038C14+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN019N23+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
                      ____________________________________________________________
consensus GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
 
. : . : . : . : . : . :
rJMFF050I13- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN025C23+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN016N11+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMFF013D10- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN008B10+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMFF032D21- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFF032D21+ CTGGGCGGCGGTCAGGCCGCCAAGCCCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMSF002N12- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN035P06+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMSF019E19- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN009E11+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN036D02+ CTGGGCGGCGGTCAGGCGGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN010I08+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN018I13+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN006L24+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN014H15+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN016G22+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN007O07+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN033L16+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN036B15+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN015P02+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN011K09+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN017P09+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN036L20+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMSF034P04- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMSF034P04+ CCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFF013D10+ CCTCA
JMFN038C14+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN019N23+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
                      ____________________________________________________________
consensus CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
 
. : . : . : . : . : . :
rJMFF050I13- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN025C23+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN016N11+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMFF013D10- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN008B10+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMFF032D21- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFF032D21+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMSF002N12- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN035P06+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMSF019E19- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN009E11+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN036D02+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCCCCCATGCTATGGCTG
JMFN010I08+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN018I13+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN006L24+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN014H15+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN016G22+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN007O07+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN033L16+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN036B15+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN015P02+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN011K09+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN017P09+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN036L20+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMSF034P04- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMSF034P04+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFF013D10+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN038C14+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN019N23+ TTTTGTTGATATGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
                      ____________________________________________________________
consensus TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
 
. : . : . : . : . : . :
rJMFF050I13- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN025C23+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN016N11+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMFF013D10- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN008B10+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMFF032D21- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFF032D21+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMSF002N12- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN035P06+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMSF019E19- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN009E11+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN036D02+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN010I08+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN018I13+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN006L24+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN014H15+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN016G22+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN007O07+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN033L16+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN036B15+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN015P02+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN011K09+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN017P09+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN036L20+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMSF034P04- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMSF034P04+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFF013D10+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN038C14+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN019N23+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
                      ____________________________________________________________
consensus GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
 
. : . : . : . : . : . :
rJMFF050I13- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCC
JMFN025C23+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN016N11+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMFF013D10- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN008B10+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMFF032D21- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFF032D21+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMSF002N12- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN035P06+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMSF019E19- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN009E11+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN036D02+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN010I08+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN018I13+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN006L24+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN014H15+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN016G22+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN007O07+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN033L16+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN036B15+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN015P02+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN011K09+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN017P09+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN036L20+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMSF019E19+ CGGAGAAGATCGCCCCAGCCA
rJMSF034P04- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMSF034P04+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFF013D10+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN038C14+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN019N23+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
                      ____________________________________________________________
consensus TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
 
. : . : . : . : . : . :
JMFN025C23+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN016N11+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMFF013D10- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN008B10+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMFF032D21- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFF032D21+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMSF002N12- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN035P06+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMSF019E19- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN009E11+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN036D02+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN010I08+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN018I13+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN006L24+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN014H15+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN016G22+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN007O07+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN033L16+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN036B15+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN015P02+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN011K09+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN017P09+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN036L20+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMSF019E19+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMSF034P04- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMSF034P04+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMSF002N12+ GCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFF013D10+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN038C14+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN019N23+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFF050I13+ TGTGTTGCAGGCTGAGAGTC
                      ____________________________________________________________
consensus GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
 
. : . : . : . : . : . :
JMFN025C23+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN016N11+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMFF013D10- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN008B10+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMFF032D21- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFF032D21+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMSF002N12- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN035P06+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMSF019E19- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN009E11+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN036D02+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGACGCGCTTTTGGCTTGACAGGGTT
JMFN010I08+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN018I13+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN006L24+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN014H15+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN016G22+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN007O07+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN033L16+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN036B15+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN015P02+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN011K09+ CCTTGGGAAGGTTTTTCAATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN017P09+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN036L20+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGAT--CCCCTTGGCTTGACAGGGTT
JMSF019E19+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMSF034P04- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMSF034P04+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMSF002N12+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFF013D10+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN038C14+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN019N23+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFF050I13+ CCTGGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
                      ____________________________________________________________
consensus CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
 
. : . : . : . : . : . :
JMFN025C23+ AATGGACGCTTTGGGTGTGGTTAAGCTCT
JMFN016N11+ AATGGACGCTTTG
rJMFF013D10- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAG
JMFN008B10+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATG
rJMFF032D21- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFF032D21+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
rJMSF002N12- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN035P06+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
rJMSF019E19- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN009E11+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN036D02+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN010I08+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN018I13+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN006L24+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN014H15+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN016G22+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN007O07+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN033L16+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN036B15+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN015P02+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN011K09+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN017P09+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN036L20+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMSF019E19+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
rJMSF034P04- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMSF034P04+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMSF002N12+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFF013D10+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN038C14+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN019N23+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFF050I13+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
                      ____________________________________________________________
consensus AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
 
. : . : . : . : . : . :
rJMFF032D21- GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAAAGAAT
JMFF032D21+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAAT
rJMSF002N12- GGCAGCCATTTTTGCACAAGAAACCGGTGGGGAAGCTGAAAGAATGCACTGAAGTGAATA
JMFN035P06+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGA
rJMSF019E19- GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACT
JMFN009E11+ GGCAGCCATTTTTGCACAAGAAACCGG
JMFN036D02+ GGCAGCCATTTT
JMFN010I08+ GGCAGCCATTTTTG
JMFN018I13+ GGCAG
JMFN006L24+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCT
JMFN014H15+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFN016G22+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTG
JMFN007O07+ GGCAGCCATTTTTGGACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAA
JMFN033L16+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAA
JMFN036B15+ GGCAGCCATTTTTGCACAAGAAACCGGT
JMFN015P02+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGA
JMFN011K09+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGA
JMFN017P09+ GGCAGCCATTTTTGCACAAG
JMFN036L20+ GGCAGCCATTTTTGCACAAGAAACCG
JMSF019E19+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACT
rJMSF034P04- GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAAANAATGCACTGAAGTGAATA
JMSF034P04+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMSF002N12+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFF013D10+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFN038C14+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFN019N23+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFF050I13+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
                      ____________________________________________________________
consensus GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
 
. : . : . : . : . : . :
rJMSF002N12- CCACACCCTGTAAT
JMFN014H15+ CCACACCCTG
rJMSF034P04- CCACACCCTGTAATGG
JMSF034P04+ CCACACCCTGTAATGGTGTTTT
JMSF002N12+ CCACACCCTGTAATGGTGTTTT
JMFF013D10+ CCACACCCTGTAATGGTGTTTT
JMFN038C14+ CCACACCCTGTAATGGTGTTTTG
JMFN019N23+ CCACACCCTGTAATGGTGTTTTGG
JMFF050I13+ CCACACCCTGTAATGGTGTTTTTAGAGTTTTTTTTTTTTTTTTCAAATGCAACTATCCAC
                      ____________________________________________________________
consensus CCACACCCTGTAATGGTGTTTTGGGAGTTTTTTTTTTTTTTTTCAAATGCAACTATCCAC
 
. : . : . : . : . : . :
JMFF050I13+ TTACCAAAAATAAATTTTAAAAAACCCCAAAAGATATTGTTTTGCCATGAACAGGCAACA
                      ____________________________________________________________
consensus TTACCAAAAATAAATTTTAAAAAACCCCAAAAGATATTGTTTTGCCATGAACAGGCAACA
 
. : . : . : . : . : . :
JMFF050I13+ ATGTCTACAATTGTTCCATCTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
rJMSF036N13- GTCTACAATTGTTCCATTTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
rJMSF029N07- GTCTACNATTGTTCCATTTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
rJMSF042K17- TAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAGCT
rJMSF015D21- TTACTCTTTTATCAG-T
                      ____________________________________________________________
consensus ATGTCTACAATTGTTCCATTTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
 
. : . : . : . : . : . :
JMFF050I13+ CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF036N13- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF029N07- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF042K17- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF015D21- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
                      ____________________________________________________________
consensus CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
 
. : . : . : . : . : . :
JMFF050I13+ TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF036N13- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF029N07- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF042K17- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF015D21- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
                      ____________________________________________________________
consensus TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
 
. : . : . : . : . : . :
JMFF050I13+ TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF036N13- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF029N07- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF042K17- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF015D21- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
                      ____________________________________________________________
consensus TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
 
. : . : . : . : . : . :
JMFF050I13+ TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF036N13- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF029N07- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF042K17- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF015D21- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
                      ____________________________________________________________
consensus TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
 
. : . : . : . : . : . :
JMFF050I13+ CTTACAATTGC
rJMSF036N13- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
rJMSF029N07- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
rJMSF042K17- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
rJMSF015D21- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
                      ____________________________________________________________
consensus CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
 
. : . : . : . : . : . :
rJMSF036N13- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
rJMSF029N07- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
rJMSF042K17- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
rJMSF015D21- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
                      ____________________________________________________________
consensus CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
 
. : . : . : . : . : . :
rJMSF036N13- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
rJMSF029N07- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
rJMSF042K17- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
rJMSF015D21- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
                      ____________________________________________________________
consensus CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
 
. : . : . : . : . : . :
rJMSF036N13- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
rJMSF029N07- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
rJMSF042K17- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
rJMSF015D21- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
                      ____________________________________________________________
consensus CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
 
. : . : . : . : . : . :
rJMSF036N13- AAAACGAGAG-------------CCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
rJMSF029N07- AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
rJMSF042K17- AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
rJMSF015D21- AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
                      ____________________________________________________________
consensus AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
 
. : . : . : . : . : . :
rJMSF036N13- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
rJMSF029N07- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
rJMSF042K17- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
rJMSF015D21- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
                      ____________________________________________________________
consensus GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
 
. : . : . : . : . : . :
rJMSF036N13- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
rJMSF029N07- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
rJMSF042K17- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
rJMSF015D21- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
                      ____________________________________________________________
consensus CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
 
. : . : . : . : . : . :
rJMSF036N13- CATGGTATTTGAACAGGGC
rJMSF029N07- CATGGTATTTGAACAGGGC
rJMSF042K17- CATGGTATTTGAACAGGGCGTTTCTTTCTCCCGACGATAATTATCAGCGTTGCTAAA
rJMSF015D21- CATGGTATTTGAACAGGGCGTTTCTTTCTCCCGACGATAATTATCAGCGTTGCTAAACTC
                      ____________________________________________________________
consensus CATGGTATTTGAACAGGGCGTTTCTTTCTCCCGACGATAATTATCAGCGTTGCTAAACTC