Contig 009916:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011A07Sequence236009916 (2)719009916 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF011A07- GAGAACAACCACAATCCCTTACCTCTCTCTCTCTAACACTCACTCCGATCGCATAGATA
rJMSF011A07+ AGAACAACCACAATCCCTTACCTCTCTCTCTCTAACACTCACTCCGATCGCATAGATA
                      ____________________________________________________________
consensus GAGAACAACCACAATCCCTTACCTCTCTCTCTCTAACACTCACTCCGATCGCATAGATA
 
. : . : . : . : . : . :
JMSF011A07- CTCCCTTAGCTCTCTTTGTCTGTAACGCTATGTAAGATCGCTCCTAAACACTCCGATCTT
rJMSF011A07+ CTCCCTTAGCTCTCTTTGTCTGTAACGCTATGTAAGATCGCTCCTAAACACTCCGATCTT
                      ____________________________________________________________
consensus CTCCCTTAGCTCTCTTTGTCTGTAACGCTATGTAAGATCGCTCCTAAACACTCCGATCTT
 
. : . : . : . : . : . :
JMSF011A07- GTTCATGGCGCTTTAGTCTTTAGGTTTTCAACTCTATTTCTACCACAATTTCATTATGAC
rJMSF011A07+ GTTCATGGCGCTTTAGTCTTTAGGTTTTCAACTCTATTTCTACCACAATTTCATTATGAC
                      ____________________________________________________________
consensus GTTCATGGCGCTTTAGTCTTTAGGTTTTCAACTCTATTTCTACCACAATTTCATTATGAC
 
. : . : . : . : . : . :
JMSF011A07- CGAAGAAATTTGTTTCGTCTATACACCCACCTCATATACAATGTTCGAACTGACTCA
rJMSF011A07+ CGAAGAAATTTGTTTCGTCTATACACCCACCTCATATACAATGTTCGAACTGACTCATTT
                      ____________________________________________________________
consensus CGAAGAAATTTGTTTCGTCTATACACCCACCTCATATACAATGTTCGAACTGACTCATTT
 
. : . : . : . : . : . :
rJMSF011A07+ CTGTTAGATCTAGTGTTCAAGATTCAATTCTGGTGTTTTAGAGTAAGAGGTTGGAGATGA
                      ____________________________________________________________
consensus CTGTTAGATCTAGTGTTCAAGATTCAATTCTGGTGTTTTAGAGTAAGAGGTTGGAGATGA
 
. : . : . : . : . : . :
rJMSF011A07+ GTCAGTGTACTATCTGTGGATTCTACCGGTTGTCGAGAAACCTAATATCAAGGTATTTTG
                      ____________________________________________________________
consensus GTCAGTGTACTATCTGTGGATTCTACCGGTTGTCGAGAAACCTAATATCAAGGTATTTTG
 
. : . : . : . : . : . :
rJMSF011A07+ TGAACAATAAGAGTAAGATTACAGTCTAACAATGGCGTTTTGGCTGCAAACTTGTCTCAA
                      ____________________________________________________________
consensus TGAACAATAAGAGTAAGATTACAGTCTAACAATGGCGTTTTGGCTGCAAACTTGTCTCAA
 
. : . : . : . : . : . :
rJMSF011A07+ CAGTGTACATATAACAAAATTTGCGAAAGGGGTTTAGAATTTGGTTTACTGCTAAAGGCT
                      ____________________________________________________________
consensus CAGTGTACATATAACAAAATTTGCGAAAGGGGTTTAGAATTTGGTTTACTGCTAAAGGCT
 
. : . : . : . : . : . :
rJMSF011A07+ GATTTGGAACAATGGTGGGTGAAAAAAAGATTGAGACTGAGGTTTATATAGGCTCAAGAA
                      ____________________________________________________________
consensus GATTTGGAACAATGGTGGGTGAAAAAAAGATTGAGACTGAGGTTTATATAGGCTCAAGAA
 
. : . : . : . : . : . :
rJMSF011A07+ GTGGAATTTGAAAGTTGAAGCTACCATTACTTGCAGCCGGAATAGAGATGGAAACCTTTG
                      ____________________________________________________________
consensus GTGGAATTTGAAAGTTGAAGCTACCATTACTTGCAGCCGGAATAGAGATGGAAACCTTTG
 
. : . : . : . : . : . :
rJMSF011A07+ AGTTTCCAAGAAATAAATCATAATAATCATGCTGATTATTTGGAAGCATTTATTTTAAAT
                      ____________________________________________________________
consensus AGTTTCCAAGAAATAAATCATAATAATCATGCTGATTATTTGGAAGCATTTATTTTAAAT
 
. : . : . : . : . : . :
rJMSF011A07+ ACATTTTTAAATCTGTATGTGTGTATCTGAAGGTCTTTACCGTGTATATATGAAATCGAT
                      ____________________________________________________________
consensus ACATTTTTAAATCTGTATGTGTGTATCTGAAGGTCTTTACCGTGTATATATGAAATCGAT