| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF035K14 | Sequence | 517 | 009909 (9) | ref|XP_007021637.1| | 6e-17 | Basic-leucine zipper transcription factor family protein [Theobroma cacao] gb|E | 692 | 009909 (9) | gb|ABP88237.1| | 1e-46 | transcription factor bZIP112 [Glycine max] |
| JMFF039M17 | Sequence | 568 | 009909 (9) | gb|KJB13235.1| | 4e-26 | hypothetical protein B456_002G064900 [Gossypium raimondii] | 745 | 009909 (9) | ref|XP_009627193.1| | 8e-63 | PREDICTED: basic leucine zipper 61-like [Nicotiana tomentosiformis] |
| JMSF010B07 | Sequence | 226 | 009909 (9) | 766 | 009909 (9) | gb|ABP88237.1| | 3e-40 | transcription factor bZIP112 [Glycine max] | |||
| JMSF021I12 | Sequence | 490 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | 231 | 009909 (9) | |||
| JMSF037P03 | Sequence | 676 | 009909 (9) | gb|KJB13236.1| | 8e-31 | hypothetical protein B456_002G064900 [Gossypium raimondii] | 664 | 009909 (9) | ref|XP_009627193.1| | 4e-65 | PREDICTED: basic leucine zipper 61-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF035K14- ACCCAAAATAGTCGGCCGTGACAACGTCGTCTCAATCCTATTCTTAGTTAACT
____________________________________________________________
consensus ACCCAAAATAGTCGGCCGTGACAACGTCGTCTCAATCCTATTCTTAGTTAACT
. : . : . : . : . : . :
JMSF010B07- GCAACCTAAGTTGTCATACATTCCGA
JMFF035K14- TCTTTATATCTTCTCAATCCTCTTTATATTCACAGCAACCTAAGTTGTCATACATTCCGA
JMFF039M17- ATTCCGA
JMSF037P03- GCAACCTAAGTTGTCATACATTCCGA
____________________________________________________________
consensus TCTTTATATCTTCTCAATCCTCTTTATATTCACAGCAACCTAAGTTGTCATACATTCCGA
. : . : . : . : . : . :
JMSF010B07- TCCCTGGGAATTTTCAGTCTGTCATTATTGTTCCATTTCAGGATTACGTTGCTGACGGTT
JMFF035K14- TCCCTGGGAATTTTCAGTCTGTCATTATTGTTCCATTTCAGGATTACGTTGCTGACGGTT
JMFF039M17- TCCCTGGGAATTTTCAGTCTGTCATTATTGTTCCATTTCAGGATTACGTTGCTGACGTTT
JMSF037P03- TCCCTGGGAATTTTCAGTCTGTCATTATTGTTCCATTTCAGGATTACGTTGCTGACGGTT
____________________________________________________________
consensus TCCCTGGGAATTTTCAGTCTGTCATTATTGTTCCATTTCAGGATTACGTTGCTGACGGTT
. : . : . : . : . : . :
JMSF010B07- TCTTCGTAGATTCAGAATTGAATAGAGAGTGATTATAGTTTGGGTTTAGTTGGTTAATTA
JMFF035K14- TCTTCGTAGATTCAGAATTGAATAGAGAGTGATTATAGTTTGGGTTTAGTTGGTTAATTA
JMFF039M17- TCTTCGTAGATTCAGAATTGAATAGAGAGTGATTATAGTTTGGGTTTAGTTGGTTAATTA
JMSF037P03- TCTTCGTAGATTCAGAATTGAATAGAGAGTGATTATAGTTTGGGTTTAGTTGGTTAATTA
____________________________________________________________
consensus TCTTCGTAGATTCAGAATTGAATAGAGAGTGATTATAGTTTGGGTTTAGTTGGTTAATTA
. : . : . : . : . : . :
JMSF010B07- AGTAGTGTGTGCATGGCGCAACTACCGCCCAAGGGCCCCTCCATGACGCAGAATTGGCCG
JMFF035K14- AGTAGTGTGTGCATGGCGCAACTACCGCCCAAGGGCCCCTCCATGACGCAGAATTGGCCG
JMFF039M17- AGTAGTGTGTGCATGGCGCAACTACCGCCCAAGGGCCCCTCCATGACGCAGAATTGGCCG
JMSF037P03- AGTAGTGTGTGCATGGCGCAACTACCGCCCAAGGGCCCCTCCATGACGCAGAATTGGCCG
____________________________________________________________
consensus AGTAGTGTGTGCATGGCGCAACTACCGCCCAAGGGCCCCTCCATGACGCAGAATTGGCCG
. : . : . : . : . : . :
JMSF010B07- TCGTCTTTTCCGTTC
JMFF035K14- TCGTCTTTTCCGTTCCAAGCAATGCCCGCTGTCGACGTCCTCCGCAGCAGCAGCGCAGCA
JMFF039M17- TCGTCTTTTCCGTTCCAAGCAATG-CCGCTGTCGACGTCCTCCGCAGCAGCAGCGCAGCA
JMSF037P03- TCGTCTTTTCCGTTCCAAGCAATG-CCGCTGTCGACGTCCTCCGCAGCAGCAGCGCAGCA
____________________________________________________________
consensus TCGTCTTTTCCGTTCCAAGCAATG-CCGCTGTCGACGTCCTCCGCAGCAGCAGCGCAGCA
. : . : . : . : . : . :
JMFF035K14- GAACCCCTGGGTCGATGAGTTCCTCGACTTCTCCTCCGCCAGGAGAAACTTCCACCGCCG
JMFF039M17- GAACCCCTGGGTCGATGAGTTCCTCGACTTCTCCTCCGCCAGGAGAAACTTCCACCGCCG
JMSF037P03- GAACCCCTGGGTCGATGAGTTCCTCGACTTCTCCTCCGCCAGGAGAAACTTCCACCGCCG
____________________________________________________________
consensus GAACCCCTGGGTCGATGAGTTCCTCGACTTCTCCTCCGCCAGGAGAAACTTCCACCGCCG
. : . : . : . : . : . :
JMFF035K14- CTCCGTCAGTGACCCCATCGCGTTCGTGGAGGCTCCCTTCATGGACGAGTGCCGCGGCGG
JMFF039M17- CTCCGTCAGTGACCCCATCGCGTTCGTGGAGGCTCCCTTCATGGACGAGTGCCGCGGCGG
JMSF037P03- CTCCGTCAGTGACCCCATCGCGTTCGTGGAGGCTCCCTTCATGGACGAGTGCCGCGGCGG
____________________________________________________________
consensus CTCCGTCAGTGACCCCATCGCGTTCGTGGAGGCTCCCTTCATGGACGAGTGCCGCGGCGG
. : . : . : . : . : . :
JMFF035K14- CGCGTTGATGACGTGCAGCAACAACGGTAACGGTAACGCCAACA
JMFF039M17- CGCGTTGATGACGTGCAGCAACAACGGTAACGGTAACGCCAACAACGGGTTTGACAGGCT
JMSF037P03- CGCGTTGATGACGTGCAGCAACAACGGTAACGGTAACGCCAACAACGGGTTTGACAGGCT
____________________________________________________________
consensus CGCGTTGATGACGTGCAGCAACAACGGTAACGGTAACGCCAACAACGGGTTTGACAGGCT
. : . : . : . : . : . :
JMFF039M17- GGATGACGAGCAGCTGACGTCCATGTTCCCCGACGATTCCTCCGCCGCCGCTGCGGCGGC
JMSF037P03- GGATGACGAGCAGCTGACGTCCATGTTCCCCGACGATTCCTCCGCCGCCGCTGCGGCGGC
____________________________________________________________
consensus GGATGACGAGCAGCTGACGTCCATGTTCCCCGACGATTCCTCCGCCGCCGCTGCGGCGGC
. : . : . : . : . : . :
JMFF039M17- CACCGCTCCGTCGTCTAATCCTTCGACGACGTCATCGGATCAAATAAGCGAAAACGAGGA
JMSF037P03- CACCGCTCCGTCGTCTAATCCTTCGACGACGTCATCGGATCAAATAAGCGAAAACGAGGA
____________________________________________________________
consensus CACCGCTCCGTCGTCTAATCCTTCGACGACGTCATCGGATCAAATAAGCGAAAACGAGGA
. : . : . : . : . : . :
JMFF039M17- AAAACCCCAAACCCGCCGCCAC
JMSF037P03- AAAACCCCAAACCCGCCGCCACGAAATTCAGCCCAAGAATGAACCGGGAGAGGTGGTTGA
rJMSF037P03+ GGTTGA
____________________________________________________________
consensus AAAACCCCAAACCCGCCGCCACGAAATTCAGCCCAAGAATGAACCGGGAGAGGTGGTTGA
. : . : . : . : . : . :
JMSF037P03- CAGCTCATACAAAACCCAACCGGCTCAACCCGCCACTAGACCGTCGCCC
rJMSF037P03+ CAGCTCATACAAAACCCAACCGGCTCAACCCGCCACTAGACCGTCGCCCGCCAATGATTC
rJMFF039M17+ CCCGCCAATGATTC
____________________________________________________________
consensus CAGCTCATACAAAACCCAACCGGCTCAACCCGCCACTAGACCGTCGCCCGCCAATGATTC
. : . : . : . : . : . :
rJMSF037P03+ CGGAGATACTTCCAATGCCATAGTAGATCCAAAGAGGATTAAGAGGATTTTAGCTAATCG
rJMFF039M17+ CGGAGATACTTCCAATGCCATAGTAGATCCAAAGAGGATTAAGAGGATTTTAGCTAATCG
____________________________________________________________
consensus CGGAGATACTTCCAATGCCATAGTAGATCCAAAGAGGATTAAGAGGATTTTAGCTAATCG
. : . : . : . : . : . :
rJMSF037P03+ ACAATCAGCTCAGAGATCAAGAGTCAGAAAGCTGCAATACTTTTCAGAGCTGGAAAGGAG
rJMFF039M17+ ACAATCAGCTCAGAGATCAAGAGTCAGAAAGCTGCAATACATTTCAGAGCTGGAAAGGAG
rJMFF035K14+ AGATCAAGAGTCAGAAAGCTGCAATACATTTCAGAGCTGGAAAGGAG
rJMSF010B07+ TTCAGAGCTGGAAAGGAG
____________________________________________________________
consensus ACAATCAGCTCAGAGATCAAGAGTCAGAAAGCTGCAATACATTTCAGAGCTGGAAAGGAG
. : . : . : . : . : . :
rJMSF037P03+ TGTAACCACATTGCAAACTGAGGTATCGGCATTGTCACCAAGGGTTGCGTTTCTGGACCA
rJMFF039M17+ TGTAACCACATTGCAAACTGAGGTATCGGCATTGTCACCAAGGGTTGCGTTTCTGGACCA
rJMFF035K14+ TGTAACCACATTGCAAACTGAGGTATCGGCATTGTCACCAAGGGTTGCGTTTNTGGACCA
rJMSF010B07+ TGTAACCACATTGCAAACTGAGGTATCGGCATTGTCACCAAGGGTTGCGGTTCTGGACCA
____________________________________________________________
consensus TGTAACCACATTGCAAACTGAGGTATCGGCATTGTCACCAAGGGTTGCGTTTCTGGACCA
. : . : . : . : . : . :
rJMSF037P03+ TCAAAGGCTGATTCTAAATGTGGATAACAGTGCTCTTAAACAGCGGATTGCAGCCTTAGC
rJMFF039M17+ TCAAAGGCTGATTCTAAATGTGGATAACAGTGCTCTTAAACAGCGGATTGCAGCCTTAGC
rJMFF035K14+ TCAAAGGCTGATTCTAAATGTGGATAACAGTGCTNTTAAACAGCGGATTGCAGCCTTAGC
rJMSF010B07+ TCAAAGGCTGATTCTAAATGTGGATAACAGTGCTCTTAAACAGCGGATTGCAGCCTTAGC
____________________________________________________________
consensus TCAAAGGCTGATTCTAAATGTGGATAACAGTGCTCTTAAACAGCGGATTGCAGCCTTAGC
. : . : . : . : . : . :
rJMSF037P03+ TCAAGACGAAATTTTCAAAGATGCTCACCAGGAGGCGTTGAAGAAGGAGATAGAAAGGCT
rJMFF039M17+ TCAAGACAAAATTTTCAAAGATGCTCACCAGGAGGCGTTGAAGAAGGAGATAGAAAGGCT
rJMFF035K14+ TCAAGACAAAATTTTCAAAGATGCTCACCAGGAGGCGTTGAAGAAGGAGATAGAAAGGCT
rJMSF010B07+ TCAAGACAAAATTTTCAAAGATGCTCACCAGGAGGCGTTGAAGAAGGAGATAGAAAGGCT
____________________________________________________________
consensus TCAAGACAAAATTTTCAAAGATGCTCACCAGGAGGCGTTGAAGAAGGAGATAGAAAGGCT
. : . : . : . : . : . :
rJMSF037P03+ GAGGCAGATCTACCATGAACAGAATNTGAAGAACACGACTGCCGGTAACAATGGCGACGG
rJMFF039M17+ GAGGCAGATNTACCATGAACAGAATNTGAAGAACACGACTGCCGGTAACAATGGCGACGG
rJMFF035K14+ GAGGCAGATNTACCATGAACAGAATNTGAAGAACACGACTGCCGGTAACAATGGCGACGG
rJMSF010B07+ GAGGCAGATCTACCATGAACAGAATCTGAAGAACACGACTGCCGGTAACAATGGCGACGG
____________________________________________________________
consensus GAGGCAGATCTACCATGAACAGAATCTGAAGAACACGACTGCCGGTAACAATGGCGACGG
. : . : . : . : . : . :
rJMSF037P03+ CGAAGAAGCAGCGGCGCCGGCGGCGCAACAAGATGGCTTGCAGCAGCAGCAGTGATGAAG
rJMFF039M17+ CGAAGAAGCAGCGGCGCCGGCGGCGCAACAAGATGGCTTGCAGCAGCAGCAGTGATGAAG
rJMFF035K14+ CGAAGAAGCAGCGGCGCCGGCGGCGCAACAAGATGGCTTGCAGCAGCAGCAGTGATGAAG
rJMSF010B07+ CGAAGAAGCAGCGGCGCCGGCGGCGCAACAAGATGGCTTGCAGCAGCAGCAGTGATGAAG
____________________________________________________________
consensus CGAAGAAGCAGCGGCGCCGGCGGCGCAACAAGATGGCTTGCAGCAGCAGCAGTGATGAAG
. : . : . : . : . : . :
rJMSF037P03+ AAGATGCGGTGCACTGTGCTAAACTGCGCCATCACGTGGCATGTTCCCATCCCATCCCAT
rJMFF039M17+ AAGATGCGGTGCACTGTGCTAAACTGCGCCATCACGTGGCATGTTCCCATCCCATCCCAT
rJMFF035K14+ AAGATGCGGTGCACTGTGCTAAACTGCGCCATCACGTGGCATGTTCCCATCCCATCCCAT
rJMSF010B07+ AAGATGCGGTGCACTGTGCTAAACTGCGCCATCACGTGGCATGTTCCCATCCCATCCCAT
____________________________________________________________
consensus AAGATGCGGTGCACTGTGCTAAACTGCGCCATCACGTGGCATGTTCCCATCCCATCCCAT
. : . : . : . : . : . :
rJMSF037P03+ CCAAGCTTTTTTTATAAATCTAAAATATTTCATGGTGGGCCATGTCCCTGTCATCAGTAG
rJMFF039M17+ CCAAGCTTTTTTTATAAATNTAAAATATTTCATGGTGGGCCATGTCCCTGTCATCAGTAG
rJMFF035K14+ CCAAGCTTTTTTTATAAATNTAAAATATTTCATGGTGGGCCATGTCCCTGTCATCAGTAG
rJMSF021I12+ AAGCTTTTTTTATAAATCTAAAATATTTCATGGTGGGCCATGTCCCTGTCATCAGTAG
rJMSF010B07+ CCAAGCTTTTTTTATAAATCTAAAATATTTCATGGTGGGCCATGTCCCTGTCATCAGTAG
____________________________________________________________
consensus CCAAGCTTTTTTTATAAATCTAAAATATTTCATGGTGGGCCATGTCCCTGTCATCAGTAG
. : . : . : . : . : . :
rJMSF037P03+ CTTTGGTGTAGATTTTTTATTTTTATTTTTTTGATTGCTCAGTGTTTTAAGAACCCAC
rJMFF039M17+ CTTTGGTGTAGGTTTTTTATTTTTATTTTTTTGATTGCTCAGTGTTTTAAGAACCCACAT
rJMFF035K14+ CTTTGGTGTAGATTTTTTATTTTTATTTTTTTGATTGCTCAGTGTTTTAAGAACCCACAT
rJMSF021I12+ CTTTGGTGTAGATTTTTTATTTTTATTTTTTTGATTGCTCAGTGTTTTAAGAACCCACAT
rJMSF010B07+ CTTTGGTGTAGATTTTTTATTTTTATTTTTTTGATTGCTCAGTGTTTTAAGAACCCACAT
____________________________________________________________
consensus CTTTGGTGTAGATTTTTTATTTTTATTTTTTTGATTGCTCAGTGTTTTAAGAACCCACAT
. : . : . : . : . : . :
rJMFF039M17+ GATATGAGTGGGGATAACCAACATTTCATTTTCATTATTATTTTTTTTTCCCCACTTTTA
rJMFF035K14+ GATATGAGTGGGGATAACCAACATTTCATTTTCATTATTATTTTTTTTTCCCCACTTTTA
rJMSF021I12+ GATATGAGTGGGGATAACCAACATTTCATTTTCATTATTA-TTTTTTTTCCCCACTTTTA
rJMSF010B07+ GATATGAGTGGGGATAACCAACATTTCATTTTCATTATTATTTTTTTTTCCCCACTTTTA
____________________________________________________________
consensus GATATGAGTGGGGATAACCAACATTTCATTTTCATTATTATTTTTTTTTCCCCACTTTTA
. : . : . : . : . : . :
rJMFF039M17+ TTTTATTTTTTTCTTTGACGTTAGATTTAATATTGAATTCGTTAATTGGTTCCTTGGGGT
rJMFF035K14+ TTTTATTTTTTTCTTTGACGTTAGATTTAATATTGAATTCGTTAATTGGTTCCTTGGGGT
rJMSF021I12+ TTTTATTTTTTT
rJMSF010B07+ TTTTATTTTTTTCTTTGACGTTAGATTTAATATTGAATTCGTTAATTGGTTCCTTGGGGT
____________________________________________________________
consensus TTTTATTTTTTTCTTTGACGTTAGATTTAATATTGAATTCGTTAATTGGTTCCTTGGGGT
. : . : . : . : . : . :
rJMFF039M17+ ATGTAATGTAA
rJMFF035K14+ ATGTAATGTAACCTTAGCCTGTATGAATTGGGA
rJMSF010B07+ ATGTAATGTAACCTTAGCCTGTATGAATTGGGATGAAAAGGGTTATGATGTTTGTGTACT
____________________________________________________________
consensus ATGTAATGTAACCTTAGCCTGTATGAATTGGGATGAAAAGGGTTATGATGTTTGTGTACT
. : . : . : . : . : . :
rJMSF010B07+ TTAATTTTGTGGAGCATGGACCGTTATTATTGATGCATAGGGTCAAAAGNTTTGTATGCC
____________________________________________________________
consensus TTAATTTTGTGGAGCATGGACCGTTATTATTGATGCATAGGGTCAAAAGNTTTGTATGCC