Contig 009901:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014D12Sequence525008765 (2)823009901 (4)ref|XP_009608003.1|2e-81PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Nicotiana tomentosiformi
JMFF021F16Sequence568009901 (4)ref|XP_009608003.1|4e-20PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Nicotiana tomentosiformi707009901 (4)emb|CDP02344.1|2e-58unnamed protein product [Coffea canephora]
JMSF007M06Sequence357016696759009901 (4)ref|XP_011099045.1|2e-46PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF021F16-                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMFF021F16-           GGAGCACAATCTGGTACTAGAAACATCCGACCATTTGCTTTCTAGGTTTCTGTTGTTCCT
                      ____________________________________________________________
consensus             GGAGCACAATCTGGTACTAGAAACATCCGACCATTTGCTTTCTAGGTTTCTGTTGTTCCT
 
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JMFF021F16-           CAAATAGGGCCAGAATCCATCGTTCTGATGAATCCGGGTTATAAAGCATAGTTTTACTTA
                      ____________________________________________________________
consensus             CAAATAGGGCCAGAATCCATCGTTCTGATGAATCCGGGTTATAAAGCATAGTTTTACTTA
 
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JMFF021F16-           CATATTTATTGTTCAAGAAAGAGTGGTCAGAGTTTCCATTGGAGAGAGGGTGCTGGTTCG
                      ____________________________________________________________
consensus             CATATTTATTGTTCAAGAAAGAGTGGTCAGAGTTTCCATTGGAGAGAGGGTGCTGGTTCG
 
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JMFF021F16-           CATAGCCACGAATGCTGCGAGCTCAGGATCCTCTCTCAGTTTCCCTGAGTTCCGTTAGGT
                      ____________________________________________________________
consensus             CATAGCCACGAATGCTGCGAGCTCAGGATCCTCTCTCAGTTTCCCTGAGTTCCGTTAGGT
 
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JMFF021F16-           GTAAGCGTTGCTTTTAACTTATGGCGTCTAGGAACTGTGAATGATCCTGGAAGGAAGTGT
                      ____________________________________________________________
consensus             GTAAGCGTTGCTTTTAACTTATGGCGTCTAGGAACTGTGAATGATCCTGGAAGGAAGTGT
 
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JMFF021F16-           TTCGAGGGGGATTGTGGTAGATTTCAGACGGTATCATGGGTGCTTCTTGTTGCTGTTTGC
                      ____________________________________________________________
consensus             TTCGAGGGGGATTGTGGTAGATTTCAGACGGTATCATGGGTGCTTCTTGTTGCTGTTTGC
 
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JMFF021F16-           GAGATAACTTGGATGATTTTGCAGATCCTAACAGCTCGATCTATAGGAATTGTTTCTGCC
rJMFF014D12+                                         CAGCTCGATCTATAGGAATTGTTTCTGCC
                      ____________________________________________________________
consensus             GAGATAACTTGGATGATTTTGCAGATCCTAACAGCTCGATCTATAGGAATTGTTTCTGCC
 
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JMFF021F16-           TGCAGTATTTTGTCCAGAATTTCTT-CCATGTGTATACATCACTTCTTCATAGTGGAGAA
rJMFF014D12+          TGCAGTATTTTGTCCAGAATTTCTTCCCATGTGTATACATCACTTCTTCATAGTGGAGAA
                      ____________________________________________________________
consensus             TGCAGTATTTTGTCCAGAATTTCTTCCCATGTGTATACATCACTTCTTCATAGTGGAGAA
 
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JMFF021F16-           CACCATGCCATATCTTCGTCCACCCAAGCGACAGCGTCTTTGAGCTCTATTGCATCGCGT
rJMFF021F16+                                   AAGCGACAGCGTCTTTGAGCTCTATTGCATCGCGT
rJMFF014D12+          CACCATGCCATATCTTCGTCCACCCAAGCGACAGCGTCTTTGAGCTTTATTGCATCGCGT
                      ____________________________________________________________
consensus             CACCATGCCATATCTTCGTCCACCCAAGCGACAGCGTCTTTGAGCTCTATTGCATCGCGT
 
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JMFF021F16-           GATAACTCTCTGTCTGAAATGTACTGTT                                
rJMFF021F16+          GATAACTCTCTGTCTGAAATGTACTGTTCTCCTCCGAGGACCGTTGCCTTATGATGCTGG
rJMFF014D12+          GATAACTCTCTGTCTGAAATGTACTGTTCTCCTCCGA-GACCGTTGCCTTATGATGCTGG
                      ____________________________________________________________
consensus             GATAACTCTCTGTCTGAAATGTACTGTTCTCCTCCGAGGACCGTTGCCTTATGATGCTGG
 
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rJMFF021F16+          GCATAGATATTTCCACTTACAACAGAATGAATTGGTCTCGGGAAGGGAAAAGGGGTCAAG
rJMFF014D12+          GCATAGATATTTCCACTTACAACAGAATGAATTGGTCTCGGGAAGGGAAAAGGGGTCAAG
                      ____________________________________________________________
consensus             GCATAGATATTTCCACTTACAACAGAATGAATTGGTCTCGGGAAGGGAAAAGGGGTCAAG
 
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rJMFF021F16+          TCACGTGCCCGACTCCGAGCCATTACAACGAAGTGATAGTGATGATGATGTGGAGTTTCC
rJMFF014D12+          TCACGTGCCCGACTCCGAGCCATTACAACGAAGTGATAGTGATGATGATGTGGAGTTTCC
                      ____________________________________________________________
consensus             TCACGTGCCCGACTCCGAGCCATTACAACGAAGTGATAGTGATGATGATGTGGAGTTTCC
 
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rJMFF021F16+          GAGTACAGGAAACAAATGGGATGAGTCTTGTGAAAAAAAGGGATCAAAAGAGGAGGACTA
rJMFF014D12+          GAGTACAGGAAACAAATGGGATGAGTCTTGTGAAAAAAAGGGATCAAAAGAGGAGGACTA
                      ____________________________________________________________
consensus             GAGTACAGGAAACAAATGGGATGAGTCTTGTGAAAAAAAGGGATCAAAAGAGGAGGACTA
 
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rJMFF021F16+          CTCTAGATCATCACTGAAGCCCTCAACAACCGAGCCAACAACTGGATTTGCTCATATCTA
rJMFF014D12+          CTCTAGATCATCACTGAAGCCCTCAACAACCGAGCCAACAACTGGATTTGCTCATATCTA
rJMSF007M06+                                                            CTCATATTTA
                      ____________________________________________________________
consensus             CTCTAGATCATCACTGAAGCCCTCAACAACCGAGCCAACAACTGGATTTGCTCATATCTA
 
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rJMFF021F16+          TCCTTCTTCGGATGATGAAGATGTCTGCCCAACATGCCTTGAAGAATATGATGAAGACAA
rJMFF014D12+          TCCTTCTTCGGATGATGAAGATGTCTGCCCAACATGCCTTGAAGAATATGATGAAGACAA
rJMSF007M06+          TTCTTCTTCGGAAGATGAAGACGTTTGCCCAACGTGTCTTGAAGAATATACCGAAGAAAA
                      ____________________________________________________________
consensus             TCCTTCTTCGGATGATGAAGATGTCTGCCCAACATGCCTTGAAGAATATGATGAAGACAA
 
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rJMFF021F16+          CCCAAGAATAATCACGAAATGCTCTCATCATTACCATCTAAGTTGCATATACGAGTGGAT
rJMFF014D12+          CCCAAGAATAATCACGAAATGCTCTCATCATTACCATCTAAGTTGCATATACGAGTGGAT
rJMSF007M06+          CCCAAAAATAATGACAAAATGCTCTCATCATTTCCACCTTGGCTGCATATACGAGTGGAT
                      ____________________________________________________________
consensus             CCCAAGAATAATCACGAAATGCTCTCATCATTACCATCTAAGTTGCATATACGAGTGGAT
 
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rJMFF021F16+          GGAGAGAAGCGATACTTGTCCAGTTTGTGGCAAGGTGATGGCATTCGACGAGA       
rJMFF014D12+          GGAGAGAAGCGATACTTGTCCAGTTTGTGGCAAGGTGATGGCATTCGACGAGA       
rJMSF007M06+          GGAGAGAAGTGATAACTGCCCAGNTTGTGGCAAGCTGATGGCATTCGATGAGACGACTTG
                      ____________________________________________________________
consensus             GGAGAGAAGCGATACTTGTCCAGTTTGTGGCAAGGTGATGGCATTCGACGAGACGACTTG
 
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rJMSF007M06+          ATCTTTTTGCTCAAAAGCATTCGGTCGTGGACGAAGGCAGCAAGGACAATAACTAGGAAC
                      ____________________________________________________________
consensus             ATCTTTTTGCTCAAAAGCATTCGGTCGTGGACGAAGGCAGCAAGGACAATAACTAGGAAC
 
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rJMSF007M06+          AAAAAACGACGGGAAGTCGCTGTGAATATCAAAACAGGAAAATGGCGGCTTGTGGGCAAG
                      ____________________________________________________________
consensus             AAAAAACGACGGGAAGTCGCTGTGAATATCAAAACAGGAAAATGGCGGCTTGTGGGCAAG
 
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rJMSF007M06+          CACAGTACATACATAAAAATAATTGTTCAGTGTAACTCTATTTGAGCACATTTTCTTCGA
                      ____________________________________________________________
consensus             CACAGTACATACATAAAAATAATTGTTCAGTGTAACTCTATTTGAGCACATTTTCTTCGA
 
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rJMSF007M06+          TCATTGTGTTTTTTCCTTGTAATTTTTAATGGAGTGGAGAGTTTCAGTCATCTTTTCTGG
                      ____________________________________________________________
consensus             TCATTGTGTTTTTTCCTTGTAATTTTTAATGGAGTGGAGAGTTTCAGTCATCTTTTCTGG
 
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rJMSF007M06+          GAAGAGANTGCATTCCTCTTTCTTGTCATTTTAAGTGTGTTCTGAGTTTGGGGTGTGGGG
                      ____________________________________________________________
consensus             GAAGAGANTGCATTCCTCTTTCTTGTCATTTTAAGTGTGTTCTGAGTTTGGGGTGTGGGG
 
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rJMSF007M06+          TAGAGTAAAGATTTTGCCCCTTTGTGCACCCAGCTTTATCTTACTTTGNCCAGAGACATT
                      ____________________________________________________________
consensus             TAGAGTAAAGATTTTGCCCCTTTGTGCACCCAGCTTTATCTTACTTTGNCCAGAGACATT