Contig 009884:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003J02Sequence135003530 (2)533009884 (8)gb|KDP46274.1|7e-29hypothetical protein JCGZ_10114 [Jatropha curcas]
JMSF012O09Sequence310012182 (2)ref|XP_010318754.1|1e-06PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101255783 [Solanum l762009884 (8)emb|CDP16697.1|6e-129unnamed protein product [Coffea canephora]
JMSF027K11Sequence676009884 (8)gb|KDP46274.1|2e-134hypothetical protein JCGZ_10114 [Jatropha curcas]759009884 (8)emb|CDP16697.1|5e-144unnamed protein product [Coffea canephora]
JMSF032K04Sequence720009884 (8)ref|XP_006435762.1|5e-145hypothetical protein CICLE_v10032088mg [Citrus clementina] ref|XP_006486301.1| P707009884 (8)emb|CDP16697.1|2e-136unnamed protein product [Coffea canephora]
JMSF044P01Sequence723009884 (8)ref|XP_006435762.1|5e-145hypothetical protein CICLE_v10032088mg [Citrus clementina] ref|XP_006486301.1| P760009884 (8)emb|CDP16697.1|1e-135unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012O09- AGTGAACAACAAATCTACAACATAAGCAAGATTTCGTATGAAAA
                      ____________________________________________________________
consensus AGTGAACAACAAATCTACAACATAAGCAAGATTTCGTATGAAAA
 
. : . : . : . : . : . :
rJMSF012O09- TTATACTTTATAGAAATAAATGAAAAACGTTACAGAAACTAGACAATATACGAATCATTT
rJMSF032K04- ATATACGAATCATTT
rJMSF027K11- ACGTTACAGAAACTAGACAATATACGAATCATTT
rJMSF044P01- ACGTTACAGAAACTAGACAATATACGAATCATTT
                      ____________________________________________________________
consensus TTATACTTTATAGAAATAAATGAAAAACGTTACAGAAACTAGACAATATACGAATCATTT
 
. : . : . : . : . : . :
rJMSF012O09- TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
rJMSF032K04- TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
rJMSF027K11- TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
rJMSF044P01- TTTGTGCTTTTAGTTGACGTTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
                      ____________________________________________________________
consensus TTTGTGCTTTTAGTTGAC-TTACAAACAAGGTAAGAGACAACAAATAATTAAACTATCTA
 
. : . : . : . : . : . :
rJMSF012O09- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
rJMSF032K04- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
rJMSF027K11- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
rJMSF044P01- AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGTNTCAGGCTAGA
                      ____________________________________________________________
consensus AATTAGAAGTCTTCATCCAACTTGAACACATGGGTGTCACCACTACCGT-TCAGGCTAGA
 
. : . : . : . : . : . :
rJMSF012O09- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
rJMSF032K04- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
rJMSF027K11- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
rJMSF044P01- CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
                      ____________________________________________________________
consensus CATGACAGATGCCTTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTG
 
. : . : . : . : . : . :
rJMSF012O09- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
rJMSF032K04- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
rJMSF027K11- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
rJMSF044P01- TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
                      ____________________________________________________________
consensus TAAGCTGATCAGCTCCATCCAATCAAACGGATTCTGAACATTGTACATCTTACTGCATCC
 
. : . : . : . : . : . :
rJMSF012O09- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
rJMSF032K04- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
rJMSF027K11- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
rJMSF044P01- CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
                      ____________________________________________________________
consensus CAATGCACCTAGCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATT
 
. : . : . : . : . : . :
rJMSF012O09- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
rJMSF032K04- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
rJMSF027K11- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
rJMSF044P01- CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
                      ____________________________________________________________
consensus CATCCCCACCAAAGCACAGGGAAGCGCGTCACACACGAATTCCCTCTCAATATCAACAGC
 
. : . : . : . : . : . :
rJMSF012O09- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
rJMSF032K04- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
rJMSF027K11- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
rJMSF044P01- TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
JMSF032K04+ TCAGCAGCCCGTAGAG
JMSF044P01+ TCAGCAGCCCGTAGAG
                      ____________________________________________________________
consensus TTCAGCCACAAGTGACTTCACGCGCTCCTCGCTCAACTTCCTCCTCAGCAGCCCGTAGAG
 
. : . : . : . : . : . :
rJMSF012O09- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
rJMSF032K04- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
rJMSF027K11- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
rJMSF044P01- CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
JMSF032K04+ CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
JMSF044P01+ CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
JMSF027K11+ TCTCGCGAGATCAACTCATTCGAGAAGGA
                      ____________________________________________________________
consensus CAAGCATGCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGA
 
. : . : . : . : . : . :
rJMSF012O09- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
rJMSF032K04- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
rJMSF027K11- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
rJMSF044P01- CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
JMSF032K04+ CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
JMSF044P01+ CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
JMSF027K11+ CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
                      ____________________________________________________________
consensus CAACCCCGGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAA
 
. : . : . : . : . : . :
rJMSF012O09- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
rJMSF032K04- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
rJMSF027K11- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
rJMSF044P01- GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
JMSF032K04+ GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
JMSF044P01+ GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
JMSF027K11+ GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
                      ____________________________________________________________
consensus GAAGATCCCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGATTCCGAGCCATC
 
. : . : . : . : . : . :
rJMSF012O09- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
rJMSF032K04- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
rJMSF027K11- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
rJMSF044P01- AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
JMSF032K04+ AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
JMSF044P01+ AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
JMSF027K11+ AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
                      ____________________________________________________________
consensus AATCCAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTG
 
. : . : . : . : . : . :
rJMSF032K04- GAACAACCTGTCCTTCTCTTCAGAATCCTTGATG
rJMSF027K11- GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
rJMSF044P01- GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
JMSF032K04+ GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
JMSF044P01+ GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
JMSF027K11+ GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
                      ____________________________________________________________
consensus GAACAACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACAT
 
. : . : . : . : . : . :
rJMSF027K11- CTCAGA
rJMSF044P01- CTCAGA
JMSF032K04+ CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
JMSF044P01+ CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
JMSF027K11+ CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
rJMSF003J02+ TGGATATTCTCAATGGNGGTCTAGAATCCATAAAATGCCCGCGCCTCCGTAAT
                      ____________________________________________________________
consensus CTCAGAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCACGCGCCTCCGCAAC
 
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JMSF032K04+ CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
JMSF044P01+ CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
JMSF027K11+ CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
rJMSF003J02+ NTAGACCTCCTTCATCAACCGTCCAGCAAGATTNTCCAAAACGANGTNGTNGGNGGCGGC
                      ____________________________________________________________
consensus CTGGACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGC
 
. : . : . : . : . : . :
JMSF032K04+ AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
JMSF044P01+ AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
JMSF027K11+ AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
rJMSF003J02+ AAAAAAGGCAAGTACGNGTTTAATAAAGNGTTTCAATTNTCAGAGGTTAGGGCTTCCCCC
                      ____________________________________________________________
consensus AAAAAAGGCAAGTATGTGCTTAATAAAGTGCTTC--TCGTCGGAGGTTAGGGCTTCCCAC
 
. : . : . : . : . : . :
JMSF032K04+ TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
JMSF044P01+ TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
JMSF027K11+ TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
rJMSF003J02+ TGACGGNGATCCTGAGAGAGATCGACCTCCTCCCCCGTCCNGAAAGACGCAACAGCTTTN
                      ____________________________________________________________
consensus TGACGGAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTC
 
. : . : . : . : . : . :
JMSF032K04+ TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
JMSF044P01+ TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
JMSF027K11+ TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
rJMSF003J02+ TTATACATCNCCCNGATTTGCGGGTACTCNATCGGGAACNTACNGAATCGGTNTGGATTG
                      ____________________________________________________________
consensus TTGTACATCTCCCAGATTTGCGGGTACTCAATCGGGAACATACAGAAGCGGTCCGGATTG
 
. : . : . : . : . : . :
JMSF032K04+ GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
JMSF044P01+ GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
JMSF027K11+ GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
rJMSF003J02+ GGGGCGAGAAGAGGCTNTTCCGGAATCGAAGGCNTTTTNTTCAGCGAAATTGGATCTAGG
                      ____________________________________________________________
consensus GGGGCGAGAAGAGGCTCTTCCGGAATCGAAGGCATTTTCTTCAGCGAAATCGAATCTAGG
 
. : . : . : . : . : . :
JMSF032K04+ GATTGCTAGGGCTTTGAG
JMSF044P01+ GATTGCTAGGGCTTTGAG
JMSF027K11+ GATTGCTAGGGCTTTGAG
rJMSF003J02+ GATTGCTAGGGCTTTGAGNCNATGAAGAAGNGAAGNGATGGTTTTTTTTTTTTCTTCTTG
                      ____________________________________________________________
consensus GATTGCTAGGGCTTTGAGNCNATGAAGAAGNGAAGNGATGGTTTTTTTTTTTTCTTCTTG
 
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rJMSF003J02+ ATTAAAGTTGAGATCTTTTAATTCTTCTTTTTCTTGATTAAAGCTAAGATCTTGAAGTTC
                      ____________________________________________________________
consensus ATTAAAGTTGAGATCTTTTAATTCTTCTTTTTCTTGATTAAAGCTAAGATCTTGAAGTTC