Contig 009872:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025F05+                                                         CCTAGGATCCTTC
                      ____________________________________________________________
consensus                                                            CCTAGGATCCTTC
 
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rJMSF025F05+          AGCCGTACTGGGACTCCCACATGGCTATCGGTGCACCAAAGTGGCAAGGACCAGAGGAAC
                      ____________________________________________________________
consensus             AGCCGTACTGGGACTCCCACATGGCTATCGGTGCACCAAAGTGGCAAGGACCAGAGGAAC
 
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rJMSF025F05+          AAGATAGCAGATGGTTTGAGCCCGTGAAATGGAAGAACTTCTCGCACGTGAGCACCGCAC
                      ____________________________________________________________
consensus             AAGATAGCAGATGGTTTGAGCCCGTGAAATGGAAGAACTTCTCGCACGTGAGCACCGCAC
 
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rJMSF025F05+          CCATAGACAGCCCCGAGACATTCATAGGCGACCTCTCCGGTGTGTACATAGTCACCGGGG
                      ____________________________________________________________
consensus             CCATAGACAGCCCCGAGACATTCATAGGCGACCTCTCCGGTGTGTACATAGTCACCGGGG
 
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rJMSF025F05+          CACAGCTCGGGGTGTGGGATTTCGGGTCAAGAAACGTCTTATACATGAAGCTCCTGTACT
                      ____________________________________________________________
consensus             CACAGCTCGGGGTGTGGGATTTCGGGTCAAGAAACGTCTTATACATGAAGCTCCTGTACT
 
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rJMSF025F05+          CGAGGGTACCAGGATGCACCATCCGGAGATCATTGTGGGACCACGCCCCGACTGATAAGT
                      ____________________________________________________________
consensus             CGAGGGTACCAGGATGCACCATCCGGAGATCATTGTGGGACCACGCCCCGACTGATAAGT
 
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rJMSF025F05+          CGAAGAAACAAACTGCTAGTCCCAGCCCCGGGGATACGAGCGTGGATTCGGGGGAGCACA
                      ____________________________________________________________
consensus             CGAAGAAACAAACTGCTAGTCCCAGCCCCGGGGATACGAGCGTGGATTCGGGGGAGCACA
 
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rJMSF025F05+          CAGCCGGCAATAAGCTGGCGAAATTCGTTGATATGACCGAGATGTGCAAGGGAGGGCAAG
                      ____________________________________________________________
consensus             CAGCCGGCAATAAGCTGGCGAAATTCGTTGATATGACCGAGATGTGCAAGGGAGGGCAAG
 
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rJMSF025F05+          ATCCTCCGGGGCATTGGTTGGTGACAGGCGGAAAACTGAGCGTGGAGAAGGGGAAAATTG
                      ____________________________________________________________
consensus             ATCCTCCGGGGCATTGGTTGGTGACAGGCGGAAAACTGAGCGTGGAGAAGGGGAAAATTG
 
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rJMSF025F05+          TTTTGAGACTGAAGTATTCTTTGCTTAATTATTAGGTATAACTCAAATGCAGCAGCAGAA
rJMFF051P10+                                 CTTAATTATTAGGTATAACTCAAATGCAGCAGCAGAA
                      ____________________________________________________________
consensus             TTTTGAGACTGAAGTATTCTTTGCTTAATTATTAGGTATAACTCAAATGCAGCAGCAGAA
 
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rJMSF025F05+          GCATCCCCTCCATGATTAATGTAGTTGGGCAGTGTTTTGGTGTATATTGGCCTCCCTTTT
rJMFF051P10+          GCATCCCCTCCATGATTAATGTAGTTGGGCAGTGTTTTGGTGTATATTGGCCTCCCTTTT
                      ____________________________________________________________
consensus             GCATCCCCTCCATGATTAATGTAGTTGGGCAGTGTTTTGGTGTATATTGGCCTCCCTTTT
 
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rJMSF025F05+          TTACCTTCATAAATGTGAATTGTATCTGTTTGATGAGTTTTGGTTTATACCTTCTAGTTG
rJMFF051P10+          TTACCTTCATAAATGTGAATTGTATCTGTTTGATGAGTTTTGGTTTATACCTTCTAGTTG
                      ____________________________________________________________
consensus             TTACCTTCATAAATGTGAATTGTATCTGTTTGATGAGTTTTGGTTTATACCTTCTAGTTG
 
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rJMSF025F05+          G                                                           
rJMFF051P10+          GGTTTTCATGTATAAATTTATTTTTAGTATATGCTGCAAAATGGTTTTTGCCAAAATAGA
                      ____________________________________________________________
consensus             GGTTTTCATGTATAAATTTATTTTTAGTATATGCTGCAAAATGGTTTTTGCCAAAATAGA
 
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rJMFF051P10+          CTACTTAAGAGTGTGTGTGAGTTTTTTGGTGGAAAAAATGGCATATTTGATGCCCTTTTA
                      ____________________________________________________________
consensus             CTACTTAAGAGTGTGTGTGAGTTTTTTGGTGGAAAAAATGGCATATTTGATGCCCTTTTA
 
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rJMFF051P10+          CCTTTGTTATTGGTAGAGCTGTTAGAGCATCCATAATAGTAGGGATATTTTGTGGTCTTT
                      ____________________________________________________________
consensus             CCTTTGTTATTGGTAGAGCTGTTAGAGCATCCATAATAGTAGGGATATTTTGTGGTCTTT
 
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rJMFF051P10+          GAGGAGTTTTTGTAAGTGTGATTAGGAAAGAGAATATGAGAGTGAGAGAAAAAAATAAAA
                      ____________________________________________________________
consensus             GAGGAGTTTTTGTAAGTGTGATTAGGAAAGAGAATATGAGAGTGAGAGAAAAAAATAAAA
 
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rJMFF051P10+          CAAAACTGAAAAAAAAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus             CAAAACTGAAAAAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT