Contig 009862:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032C23Sequence547007612 (8)783009862 (4)ref|XP_010252001.1|1e-114PREDICTED: polyadenylate-binding protein-interacting protein 12-like [Nelumbo n
JMFF040G23Sequence379007612 (8)739009862 (4)ref|XP_010252001.1|2e-106PREDICTED: polyadenylate-binding protein-interacting protein 12-like [Nelumbo n
JMFF051B08Sequence520007612 (8)447009862 (4)
JMSF044L14Sequence853009862 (4)ref|XP_010252001.1|2e-120PREDICTED: polyadenylate-binding protein-interacting protein 12-like [Nelumbo n

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF032C23+ TGACATTGATCATCAGATTACTGAGGAGCAGCTTGCAGCCT
rJMSF044L14+ AGGACTGTTTATGTATCTGACATTGATCATCAGATTACTGAGGAGCAGCTTGCAGCCT
                      ____________________________________________________________
consensus AGGACTGTTTATGTATCTGACATTGATCATCAGATTACTGAGGAGCAGCTTGCAGCCT
 
. : . : . : . : . : . :
rJMFF032C23+ TGTTTCTTAGCTGTGGCCAGGTTGTTGACTGCCGTGTTTGTGGAGATCCCAAGTCCATAC
rJMFF040G23+ TTTCTTAGCTGTGGCCAGGTTGTTGACTGCCGTGTTTGTGGAGATCCCAAGTCCATAC
rJMSF044L14+ TGTTTCTTAGCTGTGGCCAGGTTGTTGACTGCCGTGTTTGTGGAGATCCCAAGTCCATAC
                      ____________________________________________________________
consensus TGTTTCTTAGCTGTGGCCAGGTTGTTGACTGCCGTGTTTGTGGAGATCCCAAGTCCATAC
 
. : . : . : . : . : . :
rJMFF032C23+ TTCGCTTTGCTTTTATAGAGTTCACTGATGAGGAGGGTGCACATGCCGCTTTGAGTCTTT
rJMFF040G23+ TTCGCTTTGCTTTTATAGAGTTCACTGATGAGGAGGGTGCACATGCCGCTTTGAGTCTTT
rJMSF044L14+ TTCGCTTTGCTTTTATAGAGTTCACTGATGAGGAGGGTGCACATGCCGCTTTGAGTCTTT
                      ____________________________________________________________
consensus TTCGCTTTGCTTTTATAGAGTTCACTGATGAGGAGGGTGCACATGCCGCTTTGAGTCTTT
 
. : . : . : . : . : . :
rJMFF032C23+ CAGGGACTGTGCTTGGATTTTACCCTCTGAGGGTGTTGCCTTCCAAAACCGCAATTGCTC
rJMFF040G23+ CAGGGACTGTGCTTGGATTTTACCCTCTGAGGGTGTTGCCTTCCAAAACCGCAATTGCTC
rJMSF044L14+ CAGGGACTGTGCTTGGATTTTACCCTCTGAGGGTGTTGCCTTCCAAAACCGCAATTGCTC
                      ____________________________________________________________
consensus CAGGGACTGTGCTTGGATTTTACCCTCTGAGGGTGTTGCCTTCCAAAACCGCAATTGCTC
 
. : . : . : . : . : . :
rJMFF032C23+ CAGTTAACCCCACATTTTTGCCCAGGACTGAGGATGAAAGGGAGATGTGTGCAAGAACGG
rJMFF040G23+ CAGTTAACCCCACATTTTTGCCCAGGACTGAGGATGAAAGGGAGATGTGTGCAAGAACGG
rJMSF044L14+ CAGTTAACCCCACATTTTTGCCCAGGACTGAGGATGAAAGGGAGATGTGTGCAAGAACGG
                      ____________________________________________________________
consensus CAGTTAACCCCACATTTTTGCCCAGGACTGAGGATGAAAGGGAGATGTGTGCAAGAACGG
 
. : . : . : . : . : . :
rJMFF032C23+ TTTATTGCACAAATATTGACAAGAAGGTTTCTCAAGCAGATGTGAAGCTCTTTTTTGAAA
rJMFF040G23+ TTTATTGCACAAATATTGACAAGAAGGTTTCTCAAGCAGATGTGAAGCTCTTTTTTGAAA
rJMSF044L14+ TTTATTGCACAAATATTGACAAGAAGGTTTCTCAAGCAGATGTGAAGCTCTTTTTTGAAA
                      ____________________________________________________________
consensus TTTATTGCACAAATATTGACAAGAAGGTTTCTCAAGCAGATGTGAAGCTCTTTTTTGAAA
 
. : . : . : . : . : . :
rJMFF032C23+ CAATTTGTGGAGAGGTTTATCGTCTGAGGCTGCTTGGAGACTATCACCATTCCACCCGTA
rJMFF040G23+ CAATTTGTGGAGAGGTTTATCGTCTGAGGCTGCTTGGAGACTATCACCATTCCACCCGTA
rJMSF044L14+ CAATTTGTGGAGAGGTTTATCGTCTGAGGCTGCTTGGAGACTATCACCATTCCACCCGTA
                      ____________________________________________________________
consensus CAATTTGTGGAGAGGTTTATCGTCTGAGGCTGCTTGGAGACTATCACCATTCCACCCGTA
 
. : . : . : . : . : . :
rJMFF032C23+ TTGCCTTCGTTGAATTTGCAATGGCTGAAAGTGCAATTGCTGCTCTCAACTGTAGTGGTG
rJMFF040G23+ TTGCCTTCGTTGAATTTGCAATGGCTGAAAGTGCAATTGCTGCTCTCAACTGTAGTGGTG
rJMSF044L14+ TTGCCTTCGTTGAATTTGCAATGGCTGAAAGTGCAATTGCTGCTCTCAACTGTAGTGGTG
                      ____________________________________________________________
consensus TTGCCTTCGTTGAATTTGCAATGGCTGAAAGTGCAATTGCTGCTCTCAACTGTAGTGGTG
 
. : . : . : . : . : . :
rJMFF032C23+ TGGTTTTGGGTTCACTACATATCAGGGTAAGCCCGTCAAAGACTCCTGTCCGTCCACGTT
rJMFF040G23+ TGGTTTTGGGTTCACTACCTATCAGGGTAAGCCCGTCAAAGACTCCTGTCCGTCCACGTT
rJMSF044L14+ TGGTTTTGGGTTCACTACCTATCAGGGTAAGCCCGTCAAAGACTCCTGTCCGTCCACGTT
                      ____________________________________________________________
consensus TGGTTTTGGGTTCACTACCTATCAGGGTAAGCCCGTCAAAGACTCCTGTCCGTCCACGTT
 
. : . : . : . : . : . :
rJMFF032C23+ CTCCTCGCCCTCAAATGCACGGGATCAACATTGCCAGTGAAGACTGATTTACTCTGAAAC
rJMFF040G23+ CTCCTCGCCCTCAAATGCACGGGATCAACATTGCCAGTGAAGACTGATTTACTCTGAAAC
rJMSF044L14+ CTCCTCGCCCTCAAATGCACGGGATCAACATTGCCAGTGAAGACTGATTTACTCTGAAAC
                      ____________________________________________________________
consensus CTCCTCGCCCTCAAATGCACGGGATCAACATTGCCAGTGAAGACTGATTTACTCTGAAAC
 
. : . : . : . : . : . :
rJMFF032C23+ GCACCTCGTGTAAAGATGTTTTCTTTGTCCCTCTTACGTCGTCCTATATATGCTGCTTCA
rJMFF040G23+ GCACCTCGTGTAAAGATGTTTTCTTTGTCCCTCTTACGTCGTCCTATATATGCTGCTTCA
rJMSF044L14+ GCACCTCGTGTAAAGATGTTTTCTTTGTCCCTCTTACGTCGTCCTATATATGCTGCTTCA
rJMFF051B08+ TTACGTCGTCCTATATATGCTGCTTCA
                      ____________________________________________________________
consensus GCACCTCGTGTAAAGATGTTTTCTTTGTCCCTCTTACGTCGTCCTATATATGCTGCTTCA
 
. : . : . : . : . : . :
rJMFF032C23+ TCGTGTCTTCCACTTGTGGTCCTCAGTAGTTTGTGTTTTGTTTATTCTAACACGGGTAGA
rJMFF040G23+ TCGTGTCTTCCACTTGTGGTCCTCAGTAGTTTGTGTTTTGTTTATTCTAACACGGGTAGA
rJMSF044L14+ TCGTGTCTTCCACTTGTGGTCCTCAGTAGTTTGTGTTTTGTTTATTCTAACACGGGTAGA
rJMFF051B08+ TCGTGTCTTCCACTTGTGGTCCTCAGTAGTTTGTGTTTTGTTTATTCTAACACGGGTAGA
                      ____________________________________________________________
consensus TCGTGTCTTCCACTTGTGGTCCTCAGTAGTTTGTGTTTTGTTTATTCTAACACGGGTAGA
 
. : . : . : . : . : . :
rJMFF032C23+ GCTGGATGGGAACATTAAATTCGAGGCTGTGGAACAGCACGATGATGATTTTACTTTGTT
rJMFF040G23+ GCTGGATGGGAACATTAAATTCGAGGCTGTGGAACAGCACGATGATGATTTTACTTTGTT
rJMSF044L14+ GCTGGATGGGAACATTAAATTCGAGGCTGTGGAACAGCACGATGATGATTTTACTTTGTT
rJMFF051B08+ GCTGGATGGGAACATTAAATTCGAGGCTGTGGAACAGCACGATGATGATTTTACTTTGTT
                      ____________________________________________________________
consensus GCTGGATGGGAACATTAAATTCGAGGCTGTGGAACAGCACGATGATGATTTTACTTTGTT
 
. : . : . : . : . : . :
rJMFF032C23+ TCGTTTCGTTTCCTCGTACAT
rJMFF040G23+ TCGTTTCGTTTCCTCGTACAT
rJMSF044L14+ TCGTTTCGTTTCCTCGTACATTTGATCCTTCCTTCTTCTAGC
rJMFF051B08+ TCGTTTCGTTTCCTCGTACATTTGATCCTTCCTTCTTCTAGCAATGGTGTTTTTGTTTCA
                      ____________________________________________________________
consensus TCGTTTCGTTTCCTCGTACATTTGATCCTTCCTTCTTCTAGCAATGGTGTTTTTGTTTCA
 
. : . : . : . : . : . :
rJMFF051B08+ GATTGTGATGTTGATGGTAGATGATGATGATGATGCTTCAGACATTAATTGTTGTTTTGA
                      ____________________________________________________________
consensus GATTGTGATGTTGATGGTAGATGATGATGATGATGCTTCAGACATTAATTGTTGTTTTGA
 
. : . : . : . : . : . :
rJMFF051B08+ GGTTGATTTTGATCCCCATGTCAATTAATGTCACAATACTAGGATTCTTGAATCTTGATG
                      ____________________________________________________________
consensus GGTTGATTTTGATCCCCATGTCAATTAATGTCACAATACTAGGATTCTTGAATCTTGATG
 
. : . : . : . : . : . :
rJMFF051B08+ ATGCCCTATTGTCCTAGGCCTAAAGATTCAGGAATGAACTCATATAATTAATTAATACTT
                      ____________________________________________________________
consensus ATGCCCTATTGTCCTAGGCCTAAAGATTCAGGAATGAACTCATATAATTAATTAATACTT
 
. : . : . : . : . : . :
rJMFF051B08+ TATCCTTTNCTNCTXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGG
                      ____________________________________________________________
consensus TATCCTTTNCTNCTNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGG