Contig 009861:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051A16Sequence566010854 (4)ref|XP_009600966.1|3e-18PREDICTED: uncharacterized protein LOC104096302 isoform X2 [Nicotiana tomentosi583009861 (3)ref|XP_011011629.1|7e-14PREDICTED: LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associ
JMSF003O01Sequence311010854 (4)738009861 (3)ref|XP_006361556.1|1e-64PREDICTED: LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associ
JMSF041I10Sequence797010854 (4)ref|XP_009779161.1|9e-47PREDICTED: uncharacterized protein LOC104228400 isoform X2 [Nicotiana sylvestri812009861 (3)ref|XP_006361556.1|5e-139PREDICTED: LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associ

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF041I10+ CTTAGATATCTCCAGTGGTTAATTGAAGATAAGGAGTTGGA
                      ____________________________________________________________
consensus CTTAGATATCTCCAGTGGTTAATTGAAGATAAGGAGTTGGA
 
. : . : . : . : . : . :
rJMSF041I10+ CGACACTCAGTTTCATACGACATATGCTCTCTTGCTTGCAAAGTCAGCTCTTGATGCTTA
                      ____________________________________________________________
consensus CGACACTCAGTTTCATACGACATATGCTCTCTTGCTTGCAAAGTCAGCTCTTGATGCTTA
 
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rJMSF041I10+ TGAAATAGAACATTTGTCAGAGAATTCAATCTTTGATAGTCATGTCAGAGAGAGGCTACA
                      ____________________________________________________________
consensus TGAAATAGAACATTTGTCAGAGAATTCAATCTTTGATAGTCATGTCAGAGAGAGGCTACA
 
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rJMSF041I10+ GATCTTTTTACAATCATCTGACTTGTATGATCCAGAAGAGGTCCTTGACTTAATTGAAGG
                      ____________________________________________________________
consensus GATCTTTTTACAATCATCTGACTTGTATGATCCAGAAGAGGTCCTTGACTTAATTGAAGG
 
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rJMSF041I10+ TTCTGAGTTATGGATGGAGAAGGCTATTCTTTACCGGAAGCTTGGTCAGGAAGCATTAGT
                      ____________________________________________________________
consensus TTCTGAGTTATGGATGGAGAAGGCTATTCTTTACCGGAAGCTTGGTCAGGAAGCATTAGT
 
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rJMSF041I10+ CCTCCAAATTTTGGCATTAAAGCTAGAGGACTGTGAAGCTGCAGAACAGTATTGTGCAGA
                      ____________________________________________________________
consensus CCTCCAAATTTTGGCATTAAAGCTAGAGGACTGTGAAGCTGCAGAACAGTATTGTGCAGA
 
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rJMSF041I10+ GATTGGTAGACCAGATGCATATATGCAGTTGCTTGATATGTATTTGGATCCCATGAATGG
                      ____________________________________________________________
consensus GATTGGTAGACCAGATGCATATATGCAGTTGCTTGATATGTATTTGGATCCCATGAATGG
 
. : . : . : . : . : . :
rJMSF041I10+ CAAAGAGCCCATGTTTGCAGCTGCTGTTCGCCTTCTACACAACCATGGAGAAATGCTGGA
rJMSF003O01+ GAGAAATGCTGGA
                      ____________________________________________________________
consensus CAAAGAGCCCATGTTTGCAGCTGCTGTTCGCCTTCTACACAACCATGGAGAAATGCTGGA
 
. : . : . : . : . : . :
rJMSF041I10+ CCCATTACAAGTCTTGGAGAGGTTGTCACCTGATATGCCCCTTCAACTTGCTTCAGAGAC
rJMSF003O01+ CCCATTACAAGTCTTGGAGAGGTTGTCACCTGATATGCCCCTTCAACTTGCTTCAGAGAC
                      ____________________________________________________________
consensus CCCATTACAAGTCTTGGAGAGGTTGTCACCTGATATGCCCCTTCAACTTGCTTCAGAGAC
 
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rJMSF041I10+ AATGTTAAGAATGTTGAGAGCACGGCTCCATCATCATCATCAAGGCCAAATCGTACATAA
rJMSF003O01+ AATGTTAAGAATGTTGAGAGCACGGCTCCATCATCATCATCAAGGCCAAATCGTACATAA
                      ____________________________________________________________
consensus AATGTTAAGAATGTTGAGAGCACGGCTCCATCATCATCATCAAGGCCAAATCGTACATAA
 
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rJMSF041I10+ TCTATCTCGTGCTTTGGAAGTTGATGCAAGCTTGGCAAGATTGGAGGAAAGATCACGGCA
rJMSF003O01+ TCTATCTCGTGCTTTGGAAGTTGATGCAAGCTTGGCAAGATTGGAGGAAAGATCACGGCA
                      ____________________________________________________________
consensus TCTATCTCGTGCTTTGGAAGTTGATGCAAGCTTGGCAAGATTGGAGGAAAGATCACGGCA
 
. : . : . : . : . : . :
rJMSF041I10+ TGTTCTGATCAATGATGAGTCTGTATGTGATTCTTGCCATGCTCGCCTTGGAACCAAATT
rJMSF003O01+ TGTTCTGATCAATGATGAGTCTGTATGTGATTCTTGCCATGCTCGCCTTGGAACCAAATT
rJMFF051A16+ GAGTCTGTATGTGATTCTTGCCATGCTCGCCTTGAACCAAATTT
                      ____________________________________________________________
consensus TGTTCTGATCAATGATGAGTCTGTATGTGATTCTTGCCATGCTCGCCTTGGAACCAAATT
 
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rJMSF041I10+ ATTTGCTATGTACCCAGATGACACAATTGTT
rJMSF003O01+ ATTTGCTATGTACCCAGATGACACAATTGTTTGTTACAAGTGCTTTCGTCGCCAAGGTGA
rJMFF051A16+ ATTTGCTATGTACCCAGATGACACAATTG-TTGTTACAAGTGCTTTCGTCGCCAAGGTGA
                      ____________________________________________________________
consensus ATTTGCTATGTACCCAGATGACACAATTGTTTGTTACAAGTGCTTTCGTCGCCAAGGTGA
 
. : . : . : . : . : . :
rJMSF003O01+ GTCCACTTCAGTGACAGGTCGCAATTTTAAGGAAGATAGTTTATACAAACCTGGTTGGTT
rJMFF051A16+ GTCCACTTCAGTGACAGGTCGCAATTTTAAGGAAGATAGTTTATACAAACCTGGTTGGTT
                      ____________________________________________________________
consensus GTCCACTTCAGTGACAGGTCGCAATTTTAAGGAAGATAGTTTATACAAACCTGGTTGGTT
 
. : . : . : . : . : . :
rJMSF003O01+ GGTGACACGGTAACATCACTATTCCAACATTGGGATCTCCCTATTACCCTCTTCGGCTGT
rJMFF051A16+ GGTGACACGGTAACATCACTATTCCAACATTGGGATCTCCCTATTACCCTCTTCGGCTGT
                      ____________________________________________________________
consensus GGTGACACGGTAACATCACTATTCCAACATTGGGATCTCCCTATTACCCTCTTCGGCTGT
 
. : . : . : . : . : . :
rJMSF003O01+ TTTGCCAACCAGATGGTCAGAGAAAGGGTGAACAGTGTTTCTTGCGAGAACTCAGAACAA
rJMFF051A16+ TTTGCCAACCAGATGGTCAGAGAAAGGGTGAACAGTGTTTCTTGCGAGAACTCAGAACAA
                      ____________________________________________________________
consensus TTTGCCAACCAGATGGTCAGAGAAAGGGTGAACAGTGTTTCTTGCGAGAACTCAGAACAA
 
. : . : . : . : . : . :
rJMSF003O01+ ATTCATTGCCCATGAACAACCCGGGTCACACAATTATGTGGAATGTACTGTATTTAAAAA
rJMFF051A16+ ATTCATTGCCCATGAACAACCCGGGTCACACAATTATGTGGAATGTACTGTATTTAAAAA
                      ____________________________________________________________
consensus ATTCATTGCCCATGAACAACCCGGGTCACACAATTATGTGGAATGTACTGTATTTAAAAA
 
. : . : . : . : . : . :
rJMSF003O01+ CGAGTCTATGGTTGCCAAATGGAAGAGTACTTGGGTTCTTTTGAGCAAAACTTGAGAGAA
rJMFF051A16+ CGAGTCTATGGTTGCCAAATGGAAGAGTACTTGGGTTCTTTTGAGCAAAACTTGAGAGAA
                      ____________________________________________________________
consensus CGAGTCTATGGTTGCCAAATGGAAGAGTACTTGGGTTCTTTTGAGCAAAACTTGAGAGAA
 
. : . : . : . : . : . :
rJMSF003O01+ GAGAGATTGTTGTACACTGAGTAGTGTTTTTGGTAAAGATGTTTTAATAATCTTATAGTG
rJMFF051A16+ GAGAGATTGTTGTACACTGAGTAGTGTTTTTGGTAAAGATGTTTTAATAATCTTATAGTG
                      ____________________________________________________________
consensus GAGAGATTGTTGTACACTGAGTAGTGTTTTTGGTAAAGATGTTTTAATAATCTTATAGTG
 
. : . : . : . : . : . :
rJMSF003O01+ GTTGATTGATACTGTATGAAATTAGATAGCGATGTCAGATTGTGTTGCAATGTAAC
rJMFF051A16+ GTTGATTGATACTGTATGAAATTAGATAGCGATGTCAGATTGTGTTGCAATGTAACTGGA
                      ____________________________________________________________
consensus GTTGATTGATACTGTATGAAATTAGATAGCGATGTCAGATTGTGTTGCAATGTAACTGGA
 
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rJMFF051A16+ AATTGAAATTACATGCATTGTTAGAATGCGTTTTTCGAGTGAATTTTTGTTGCCCCTCGT
                      ____________________________________________________________
consensus AATTGAAATTACATGCATTGTTAGAATGCGTTTTTCGAGTGAATTTTTGTTGCCCCTCGT