Contig 009851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017B12Sequence584009851 (6)ref|XP_010321914.1|7e-11PREDICTED: josephin-like protein [Solanum lycopersicum]605009851 (6)ref|XP_010321914.1|7e-11PREDICTED: josephin-like protein [Solanum lycopersicum]
JMFF018D23Sequence577009851 (6)ref|XP_010321914.1|7e-11PREDICTED: josephin-like protein [Solanum lycopersicum]670009851 (6)ref|XP_010321914.1|9e-11PREDICTED: josephin-like protein [Solanum lycopersicum]
JMFF049O11Sequence512009851 (6)ref|XP_010321914.1|5e-10PREDICTED: josephin-like protein [Solanum lycopersicum]383009851 (6)

Alignment

This contig is upended


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JMFF017B12-                                                                 AAGTAA
rJMFF017B12+                                                                AAGTAA
                      ____________________________________________________________
consensus                                                                   AAGTAA
 
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JMFF017B12-           TTACCACCATGTCCCATCCTACCTAGCTAGCTACCTCAATTTTCATCATTATTCTCTTCT
rJMFF017B12+          TTACCACCATGTCCCATCCTACCTAGCTAGCTACCTCAATTTTCATCATTATTCTCTTCT
JMFF049O11-                                                          ATTATTCTCTTCT
JMFF018D23-                                                          ATTATTCTCTTCT
rJMFF018D23+                                                         ATTATTCTCTTCT
                      ____________________________________________________________
consensus             TTACCACCATGTCCCATCCTACCTAGCTAGCTACCTCAATTTTCATCATTATTCTCTTCT
 
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JMFF017B12-           CTTCTATCTCATCTGCCTCTCTTCAAATTCCACCACCCAATAACATCCTTATATTGAAGC
rJMFF017B12+          CTTCTATCTCATCTGCCTCTCTTCAAATTCCACCACCCAATAACATCCTTATATTGAAGC
JMFF049O11-           CTTCTATCTCATCTGCCTCTCTTCAAATTCCACCACCCAATAACATCCTTATATTGAAGC
JMFF018D23-           CTTCTATCTCATCTGCCTCTCTTCAAATTCCACCACCCAATAACATCCTTATATTGAAGC
rJMFF018D23+          CTTCTATCTCATCTGCCTCTCTTCAAATTCCACCACCCAATAACATCCTTATATTGAAGC
                      ____________________________________________________________
consensus             CTTCTATCTCATCTGCCTCTCTTCAAATTCCACCACCCAATAACATCCTTATATTGAAGC
 
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JMFF017B12-           TGAGATATGGATCCAGATAGCAGAGGAGGAGGAGTAGCGTCGTCGTCACCCAAGTTCAGC
rJMFF017B12+          TGAGATATGGATCCAGATAGCAGAGGAGGAGGAGTAGCGTCGTCGTCACCCAAGTTCAGC
JMFF049O11-           TGAGATATGGATCCAGATAGCAGAGGAGGAGGAGTAGCGTCGTCGTCACCCAAGTTCAGC
JMFF018D23-           TGAGATATGGATCCAGATAGCAGAGGAGGAGGAGTAGCGTCGTCGTCACCCAAGTTCAGC
rJMFF018D23+          TGAGATATGGATCCAGATAGCAGAGGAGGAGGAGTAGCGTCGTCGTCACCCAAGTTCAGC
                      ____________________________________________________________
consensus             TGAGATATGGATCCAGATAGCAGAGGAGGAGGAGTAGCGTCGTCGTCACCCAAGTTCAGC
 
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JMFF017B12-           CGGAGTTGTAGCGGTTTCAGAAGATGGGAACTGTCTCCGATAAGATATCTCAAACTTGTC
rJMFF017B12+          CGGAGTTGTAGCGGTTTCAGAAGATGGGAACTGTCTCCGATAAGATATCTCAAACTTGTC
JMFF049O11-           CGGAGTTGTAGCGGTTTCAGAAGATGGGAACTGTCTCCGATAAGATATCTCAAACTTGTC
JMFF018D23-           CGGAGTTGTAGCGGTTTCAGAAGATGGGAACTGTCTCCGATAAGATATCTCAAACTTGTC
rJMFF018D23+          CGGAGTTGTAGCGGTTTCAGAAGATGGGAACTGTCTCCGATAAGATATCTCAAACTTGTC
                      ____________________________________________________________
consensus             CGGAGTTGTAGCGGTTTCAGAAGATGGGAACTGTCTCCGATAAGATATCTCAAACTTGTC
 
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JMFF017B12-           GGCGGAAAGGTGGTGGTAGCTGCTTTGCGGATCATGTATCCGGCGGCCAAGACTGGCGCC
rJMFF017B12+          GGCGGAAAGGTGGTGGTAGCTGCTTTGCGGATCATGTATCCGGCGGCCAAGACTGGCGCC
JMFF049O11-           GGCGGAAAGGTGGTGGTAGCTGCTTTGCGGATCATGTATCCGGCGGCCAAGACTGGCGCC
JMFF018D23-           GGCGGAAAGGTGGTGGTAGCTGCTTTGCGGATCATGTATCCGGCGGCCAAGACTGGCGCC
rJMFF018D23+          GGCGGAAAGGTGGTGGTAGCTGCTTTGCGGATCATGTATCCGGCGGCCAAGACTGGCGCC
                      ____________________________________________________________
consensus             GGCGGAAAGGTGGTGGTAGCTGCTTTGCGGATCATGTATCCGGCGGCCAAGACTGGCGCC
 
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JMFF017B12-           CGCAACCGGAAAGTTACTTCTTCTTCGTCGGAGAACGCAACCAAGACGCCGCCGCCGGCT
rJMFF017B12+          CGCAACCGGAAAGTTACTTCTTCTTCGTCGGAGAACGCAACCAAGACGCCGCCGCCGGCT
JMFF049O11-           CGCAACCGGAAAGTTACTTCTTCTTCGTCGGAGAACGCAACCAAGACGCCGCCGCCGGCT
JMFF018D23-           CGCAACCGGAAAGTTACTTCTTCTTCGTCGGAGAACGCAACCAAGACGCCGCCGCCGGCT
rJMFF018D23+          CGCAACCGGAAAGTTACTTCTTCTTCGTCGGAGAACGCAACCAAGACGCCGCCGCCGGCT
rJMFF049O11+                                               CAACCAAGACGCCGCCGCCGGCT
                      ____________________________________________________________
consensus             CGCAACCGGAAAGTTACTTCTTCTTCGTCGGAGAACGCAACCAAGACGCCGCCGCCGGCT
 
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JMFF017B12-           TCTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGAAGCCGTTAAAGATTGCATC
rJMFF017B12+          TCTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGAAGCCGTTAAAGATTGCATC
JMFF049O11-           TCTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGGAGCCGTTAAAGATTGCATC
JMFF018D23-           TCTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGAAGCCGTTAAAGATTGCATC
rJMFF018D23+          TCTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGAAGCCGTTAAAGATTGCATC
rJMFF049O11+          TTTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGGAGCCGTTAAAGATTGCATC
                      ____________________________________________________________
consensus             TCTGCTGTTCGTCTTGCCGTTGATGATTCCCACAGAGCGGAAGCCGTTAAAGATTGCATC
 
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JMFF017B12-           CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
rJMFF017B12+          CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
JMFF049O11-           CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
JMFF018D23-           CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
rJMFF018D23+          CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
rJMFF049O11+          CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
                      ____________________________________________________________
consensus             CACTTCATGAACAACATCTCCACCATCCCTAGATCCAATTCTCTCTCCTGCAAACCTTAA
 
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JMFF017B12-           TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTGTTCAATAAACTGGT
rJMFF017B12+          TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTGTTCAATAAACTGGT
JMFF049O11-           TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTGTTC-ATAAACTGGT
JMFF018D23-           TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTGTTCAATAAACTGGT
rJMFF018D23+          TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTGTTCAATAAACTGGT
rJMFF049O11+          TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTTTTCAATAAACTGGT
                      ____________________________________________________________
consensus             TTATTGCTAACTAGCTAGCTACTGGTAGGTGTATGAATTGTGTGTGTTCAATAAACTGGT
 
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JMFF017B12-           GCACGAAACCATAATATATGTAATGATCGATGAAACAA                      
rJMFF017B12+          GCACGAAACCATAATATATGTAATGATCGATGAAACAACAACAGGATAAGCTAAGTAGT 
JMFF049O11-           GCACGAAACCATAATATATG                                        
JMFF018D23-           GCACGAAACCATAATATATGTAATGATCGATGAAACAACAACAGGATAAGCTAAGTAGTT
rJMFF018D23+          GCACGAAACCATAATATATGTAATGATCGATGAAACAACAACAGGATAAGCTAAGTAGTT
rJMFF049O11+          GCACGAAACCATAATATATGTAATGATCGATGAAACAACAACAGGTTAAGCTTAGTAGTT
                      ____________________________________________________________
consensus             GCACGAAACCATAATATATGTAATGATCGATGAAACAACAACAGGATAAGCTAAGTAGTT
 
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JMFF018D23-           TGTGCTTTTATGGTTTCCTTCCTA                                    
rJMFF018D23+          TGTGCTTTTATGGTTTCCTTCCTATATTCCATGTTTTCGACAAGTACTAGGATTTTCTGG
rJMFF049O11+          TGTGTCTTTATGGTTTCCTTCCTATATTCCATGTTTTCGACAAGTACTAGGATTTTCTGG
                      ____________________________________________________________
consensus             TGTGCTTTTATGGTTTCCTTCCTATATTCCATGTTTTCGACAAGTACTAGGATTTTCTGG
 
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rJMFF018D23+          GCATGTTTTGTTTGTTTTCTTGGATTATTGTTCTTCCAACC                   
rJMFF049O11+          GCATGTTTTGTTTGTTTTCTTGGATTATTGTTCTTCCAACCATATATACACTTGAAACAT
                      ____________________________________________________________
consensus             GCATGTTTTGTTTGTTTTCTTGGATTATTGTTCTTCCAACCATATATACACTTGAAACAT