Contig 009850:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF031H16-                                                                     CT
                      ____________________________________________________________
consensus                                                                       CT
 
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JMFF031H16-           CACTTTCTCAATTCTCACCGTCAACGGAGACAGTCATTCAAAGCGAAACATCGTCGGAGA
JMFF049N14-                                                               GTCGGAGA
                      ____________________________________________________________
consensus             CACTTTCTCAATTCTCACCGTCAACGGAGACAGTCATTCAAAGCGAAACATCGTCGGAGA
 
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JMFF031H16-           AATCATTTTCTGAAAAAAACAGAAAAAAAAATCGTTTTTTCGATCAATTAAGAAGAAAGA
JMFF049N14-           AATCATTTTCTGAAAAAAACAGAAAAAAAAATCGTTTTTTCGATCAATTAAGAAGAAAGA
                      ____________________________________________________________
consensus             AATCATTTTCTGAAAAAAACAGAAAAAAAAATCGTTTTTTCGATCAATTAAGAAGAAAGA
 
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JMFF031H16-           AATGTCTGGGTGCAGCAGAATCCAGCACATTGTGAGGCTCCGGCAGATGATCCGGTGGTG
JMFF049N14-           AATGTCTGGGTGCAGCAGAATCCAGCACATTGTGAGGCTCCGGCAGATGATCCGGTGGTG
                      ____________________________________________________________
consensus             AATGTCTGGGTGCAGCAGAATCCAGCACATTGTGAGGCTCCGGCAGATGATCCGGTGGTG
 
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JMFF031H16-           GCGCAAGAAGGCGGCAATGGCGGCCCGCAGCCGCGTCCCGGCCGATGTCCCCGCCGGACA
JMFF049N14-           GCGCAAGAAGGCGGCAATGGCGGCCCGCAGCCGCGTCCCGGCCGATGTCCCCGCCGGACA
                      ____________________________________________________________
consensus             GCGCAAGAAGGCGGCAATGGCGGCCCGCAGCCGCGTCCCGGCCGATGTCCCCGCCGGACA
 
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JMFF031H16-           CGTGGCGATCACGGTCGGGACGAACAGCAAACGGTTCGTGGTCCGCGCCACGTACCTGAA
JMFF049N14-           CGTGGCGATCACGGTCGGGACGAACAGCAAACGGTTCGTGGTCCGCGCCACGTACCTGAA
                      ____________________________________________________________
consensus             CGTGGCGATCACGGTCGGGACGAACAGCAAACGGTTCGTGGTCCGCGCCACGTACCTGAA
 
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JMFF031H16-           CCACCCGGTCTTCAAGAAGCTACTGTCGCAGGCGGAAGAAGAGTACGGGTTTACCAACTC
JMFF049N14-           CCACCCGGTCTTCAAGAAGCTACTGTCGCAGGCGGAAGAAGAGTACGGGTTTACCAACTC
rJMFF031H16+                                             AAGAAGAGTACGGGTTTACCAACTC
                      ____________________________________________________________
consensus             CCACCCGGTCTTCAAGAAGCTACTGTCGCAGGCGGAAGAAGAGTACGGGTTTACCAACTC
 
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JMFF031H16-           CGGGCCGTTAGCCATTCCCTGCGACGAGTCGGTGTTCGAGGAAATTCTCCGGTATTTGAC
JMFF049N14-           CGGGCCGTTAGCCATTCCCTGCGACGAGTCGGTGTTCGAGGAAATTCTCCGGTATTTGAC
rJMFF031H16+          CGGGCCGTTAGCCATTCCCTGCGACGAGTCGGTGTTCGAGGAAATTCTCCGGTATTTGAC
                      ____________________________________________________________
consensus             CGGGCCGTTAGCCATTCCCTGCGACGAGTCGGTGTTCGAGGAAATTCTCCGGTATTTGAC
 
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JMFF031H16-           CCGATCCGAATCCGATCACAAGACCCGGTTCATGAACTACGAGGACTTCCAGAGATACTG
JMFF049N14-           CCGATCCGAATCCGATCACAAGACCCGGTTCATGAACTACGAGGACTTCCAGAGATACTG
rJMFF031H16+          CCGATCCGAATCCGATCACAAGACCCGGTTCATGAACTACGAGGACTTCCAGAGATACTG
                      ____________________________________________________________
consensus             CCGATCCGAATCCGATCACAAGACCCGGTTCATGAACTACGAGGACTTCCAGAGATACTG
 
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JMFF031H16-           CCACGTCGGCATCCGAAGCAACCTTGAATTCTGGGGCGAGTCACGCCCGCTCTTACATGG
JMFF049N14-           CCACGTCGGCATCCGAAGCAACCTTGAATTCTGGGGCGAGTCACGCCCGCTCTTACATGG
rJMFF031H16+          CCACGTCGGCATCCGAAGCAACCTTGAATTCTGGGGCGAGTCACGCCCGCTCTTACATGG
                      ____________________________________________________________
consensus             CCACGTCGGCATCCGAAGCAACCTTGAATTCTGGGGCGAGTCACGCCCGCTCTTACATGG
 
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JMFF031H16-           CGTTTCCGGTAAATCGATATGCTAATGCCCCGGGGGGTCGTTTG                
JMFF049N14-           CGTTTCCGGTAAATCGATATGCTAATGCCCCGGGGGGTCGTTTGGTTCCGAGTTTAGGAA
rJMFF031H16+          CGTTTCCGGTAAATCGATATGCTAATGCCCCGGGGGGTCGTTTGGTTCCGAGTTTAGGAA
                      ____________________________________________________________
consensus             CGTTTCCGGTAAATCGATATGCTAATGCCCCGGGGGGTCGTTTGGTTCCGAGTTTAGGAA
 
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JMFF049N14-           TCGGCAGTGATTTAAGTCAGATAACCGGAATTCGTGATTTCATTTTGCGGAAAC      
rJMFF031H16+          TCGGCAGTGATTTAAGTCAGATAACCGGAATTCGTGATTTCATTTTGCGGAAACCAAACG
                      ____________________________________________________________
consensus             TCGGCAGTGATTTAAGTCAGATAACCGGAATTCGTGATTTCATTTTGCGGAAACCAAACG
 
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rJMFF031H16+          CGTACTATAGGACAAGTATATGATATGATATGACAGACATTATTGGATGGAGAAAATAAA
                      ____________________________________________________________
consensus             CGTACTATAGGACAAGTATATGATATGATATGACAGACATTATTGGATGGAGAAAATAAA
 
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rJMFF031H16+          GAAACACTGCAACACTATCGGTGCTCCGATTTGACTCGTCCGAGTTGCACTGCCGGCACG
                      ____________________________________________________________
consensus             GAAACACTGCAACACTATCGGTGCTCCGATTTGACTCGTCCGAGTTGCACTGCCGGCACG
 
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rJMFF031H16+          GCGGTCAACGCGCTTGACTCGGTTGACTACTCCGTTTTAGGACGGTGATACATTTTTCTT
rJMFF049N14+                  CGCGCTTGACTCGGTTGACTACTCCGTTTTAGGACGGTGATACATTTTTCTT
                      ____________________________________________________________
consensus             GCGGTCAACGCGCTTGACTCGGTTGACTACTCCGTTTTAGGACGGTGATACATTTTTCTT
 
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rJMFF031H16+          ACCATATTGGTAAGTGGGAAATGAAGTAATTTTTGTATTTATCTCTTTTTCTTTTTTTAT
rJMFF049N14+          ACCATATTGGTAAGTGGGAGATGAAGTAATTTTGGTATTTATCTCTTTTTCTTTTTTTAT
                      ____________________________________________________________
consensus             ACCATATTGGTAAGTGGGAGATGAAGTAATTTTTGTATTTATCTCTTTTTCTTTTTTTAT
 
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rJMFF031H16+          TTTCGGTGAATACTCCGGAGAATGTGATGGAGATGGCAACCGAGTCGTCCCGAGTTCGAA
rJMFF049N14+          TTTCGGGGAATACTCCGGAGAATGTGATGGAGATGGCAACCGAGTCGTCCCGAGTTCGAA
                      ____________________________________________________________
consensus             TTTCGGTGAATACTCCGGAGAATGTGATGGAGATGGCAACCGAGTCGTCCCGAGTTCGAA
 
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rJMFF031H16+          TCTGATGGAGTCAAGAAAATCAAAGACTCCACGGCGGCGGCAAGAAGCGGCGGAGATGAT
rJMFF049N14+          TCTGATGGAGTCAAGAAAATCAAAGACTCCCCGGCGGCGGCAAGAAGCGGCGGAGATGAT
                      ____________________________________________________________
consensus             TCTGATGGAGTCAAGAAAATCAAAGACTCCCCGGCGGCGGCAAGAAGCGGCGGAGATGAT
 
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rJMFF031H16+          CTGATCTGATGACTGTAATGGCCATATTCCATCGTCTTGTAAATTGATGATTGGAAAATA
rJMFF049N14+          CTGATCTGATGACTGTAATGGCCATATTCCATCGTCTTGTAAATTGATGATTGGAAAATA
                      ____________________________________________________________
consensus             CTGATCTGATGACTGTAATGGCCATATTCCATCGTCTTGTAAATTGATGATTGGAAAATA
 
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rJMFF031H16+          TGTAGAAATCGAGATATTT                                         
rJMFF049N14+          TGTAGAAATCGAGATATTTTGTAATTTTTTTCTTGTTGGAATTCATTGTTATTGATAATT
                      ____________________________________________________________
consensus             TGTAGAAATCGAGATATTTTGTAATTTTTTTCTTGTTGGAATTCATTGTTATTGATAATT
 
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rJMFF049N14+          CTTCTCCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAG
                      ____________________________________________________________
consensus             CTTCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAG