| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF049L18 | Sequence | 628 | 009424 (3) | dbj|BAC53892.1| | 3e-70 | cytochrome P450 [Petunia x hybrida] | 612 | 009849 (3) | ref|XP_009589554.1| | 1e-55 | PREDICTED: cytochrome P450 76A2-like [Nicotiana tomentosiformis] |
| JMSF019J01 | Sequence | 509 | 009424 (3) | emb|CDP15344.1| | 1e-62 | unnamed protein product [Coffea canephora] | 746 | 009849 (3) | ref|XP_009589554.1| | 2e-95 | PREDICTED: cytochrome P450 76A2-like [Nicotiana tomentosiformis] |
| JMSF031P23 | Sequence | 661 | 009424 (3) | emb|CDP15344.1| | 1e-72 | unnamed protein product [Coffea canephora] | 611 | 009849 (3) | ref|XP_009589554.1| | 2e-79 | PREDICTED: cytochrome P450 76A2-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF019J01+ TTCTCATATTTATCTTGGAAATGTTTTTTGCTGGTACAGAGACAAGTA
____________________________________________________________
consensus TTCTCATATTTATCTTGGAAATGTTTTTTGCTGGTACAGAGACAAGTA
. : . : . : . : . : . :
rJMSF031P23+ AATCAGAAGCATTTGCCAAAG
rJMSF019J01+ GCAGCACAGTGGAGTGGGCAATGACTGAGCTTCTACGCAAATCAGAAGCATTTGCCAAAG
____________________________________________________________
consensus GCAGCACAGTGGAGTGGGCAATGACTGAGCTTCTACGCAAATCAGAAGCATTTGCCAAAG
. : . : . : . : . : . :
rJMSF031P23+ CGAAAGCCGAGATCTCAGAGGTTGTAGGATCAACCAGGAAGCTTGAGGAGAGTGATATTA
rJMSF019J01+ CGAAAGCCGAGATCTCAGAGGTTGTAGGATCAACCAGGAAGCTTGAGGAGAGTGATATTA
____________________________________________________________
consensus CGAAAGCCGAGATCTCAGAGGTTGTAGGATCAACCAGGAAGCTTGAGGAGAGTGATATTA
. : . : . : . : . : . :
rJMSF031P23+ AAAATTTACCATATCTCCAAGCTGTGATCAAAGAAACCCTTCGTTTGCACCCTCCGGTTC
rJMSF019J01+ AAAATTTACCATATCTCCAAGCTGTGATCAAAGAAGCCCTTCGTTTGCACCCTCCGGTTC
____________________________________________________________
consensus AAAATTTACCATATCTCCAAGCTGTGATCAAAGAAGCCCTTCGTTTGCACCCTCCGGTTC
. : . : . : . : . : . :
rJMSF031P23+ CATTGTTGGTTCCAAGAAAAGGATATGAAGACATCAAATTCATGGGATATGACATACCCC
rJMSF019J01+ CATTGTTGGTTCCAAGAAAAGGATATGAAGACATCAAATTCATGGGATATGACATACCCC
rJMFF049L18+ TTGGTTCCGAGAAAAGGATATGAAGACATCAAATTCATGGGATATGACATACCCC
____________________________________________________________
consensus CATTGTTGGTTCCAAGAAAAGGATATGAAGACATCAAATTCATGGGATATGACATACCCC
. : . : . : . : . : . :
rJMSF031P23+ AAGGCACTCAAGTTTACATCAATGCTTGGGCAATCGGAAGAGATCCCCAGTATTGGGAAG
rJMSF019J01+ AAGGCACTCAAGTTTACATCAATGCTTGGGCAATCGGAAGAGATCCCCAGTATTGGGAAG
rJMFF049L18+ AAGGCACTCAAGTTTACATCAATGCTTGGGCAATTGGAAGAGATCCCTAATGCTGGGAAG
____________________________________________________________
consensus AAGGCACTCAAGTTTACATCAATGCTTGGGCAATCGGAAGAGATCCCCAGTATTGGGAAG
. : . : . : . : . : . :
rJMSF031P23+ ATCCATTAGAGTTTAAGCCTGAAAGGTTCCTGGATTCCAAGATCGATTTTAAGGGTCAGC
rJMSF019J01+ ATCCATTAGAGTTTAAGCCTGAAAGGTTCCTGGATTCCAAGATCGATTTTAAGGGTCAGC
rJMFF049L18+ ATCCATTAGAGTTTAAGCCTGAAAGGTTCCTGGATTCCAAGATTGATTTCAAGGGTCAGC
____________________________________________________________
consensus ATCCATTAGAGTTTAAGCCTGAAAGGTTCCTGGATTCCAAGATCGATTTTAAGGGTCAGC
. : . : . : . : . : . :
rJMSF031P23+ ACTTTGAGTTGATACCATTTGGTTCAGGGAGGAGGGTTTGTGTTGGGCTTTCTTTGGGGA
rJMSF019J01+ ACTTTGAGTTGATACCATTTGGTTCAGGGAGGAGGGTTTGTGTTGGGCTTTCTTTGGGGA
rJMFF049L18+ ACTTTGAGTTGATACCATTTGGTTCAGGTAGGAGGGTCTGTGTTGGGCTTCCTTTGG---
____________________________________________________________
consensus ACTTTGAGTTGATACCATTTGGTTCAGGGAGGAGGGTTTGTGTTGGGCTTTCTTTGGGGA
. : . : . : . : . : . :
rJMSF031P23+ ACCGCATGGCACACTTTGTTTTGGGTTCACTGCTCCGGGAGTTTGACTGGGAATTGGATC
rJMSF019J01+ ACCGCATGGCACACTTTGTTTTGGGTTCACTGCTCCGGGAGTTTGACTGGGAATTGGATC
rJMFF049L18+ ---GCATGATACACTTTGTTTTGGGTTCACTGCTCCGGGAGTTTGACTGGGAACTGGATC
____________________________________________________________
consensus ACCGCATGGCACACTTTGTTTTGGGTTCACTGCTCCGGGAGTTTGACTGGGAATTGGATC
. : . : . : . : . : . :
rJMSF031P23+ ATGCAATTGATCCCAAAAATATGGATATGCGTGAAAGGATGGGCTCAACTGTGAGAAAAC
rJMSF019J01+ ATGCAATTGATCCCAAAAATATGGATATGCGTGAAAGGATGGGCTCAACTGTGAGAAAAC
rJMFF049L18+ ATGCAATTGATCCCAAAAACATGGATATGCATGAAAGGATGGGCTCAATTGTGAAAAAGC
____________________________________________________________
consensus ATGCAATTGATCCCAAAAATATGGATATGCGTGAAAGGATGGGCTCAACTGTGAGAAAAC
. : . : . : . : . : . :
rJMSF031P23+ TCCAGCCATTGCAAGCAATACCAAAAAGGAAATGCTAACCAGCCCTGATTATACTATTCA
rJMSF019J01+ TCCAGCCATTGCAAGCAATACCAAAAAGGAAATGCTAACCAGCCCTGATTATACTATTCA
rJMFF049L18+ TCCAACCATTGCAAGCAATATCAAAAAGGAAGTGCTAACCAACCCTGATTATACTATTCA
____________________________________________________________
consensus TCCAGCCATTGCAAGCAATACCAAAAAGGAAATGCTAACCAGCCCTGATTATACTATTCA
. : . : . : . : . : . :
rJMSF031P23+ CAAGCCAATCACTTTATGATG
rJMSF019J01+ CAAGCCAATCACTTTATGATG
rJMFF049L18+ CAAGCCAACCACTTTATGATGCAATTGTTATATCGTGCACCAGGGCACACAATGCATTGA
____________________________________________________________
consensus CAAGCCAATCACTTTATGATGCAATTGTTATATCGTGCACCAGGGCACACAATGCATTGA
. : . : . : . : . : . :
rJMFF049L18+ GTGCCTGGCCTAAAACGACGTCGTTTTTTATGTTAAGATTTTATGTGTATTATGTTAAGA
____________________________________________________________
consensus GTGCCTGGCCTAAAACGACGTCGTTTTTTATGTTAAGATTTTATGTGTATTATGTTAAGA
. : . : . : . : . : . :
rJMFF049L18+ GTTTATGTGTATTATGTAATTATGTTAAGCGTTTATGTATATTATGTTATGAGTTTATGT
____________________________________________________________
consensus GTTTATGTGTATTATGTAATTATGTTAAGCGTTTATGTATATTATGTTATGAGTTTATGT