Contig 009823:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034C10Sequence465003222 (3)ref|XP_009627792.1|3e-50PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis]681009823 (3)ref|XP_009796698.1|2e-49PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris]
JMFF047D09Sequence631003222 (3)ref|XP_009627792.1|7e-91PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis]602009823 (3)ref|XP_002511066.1|3e-19calnexin, putative [Ricinus communis] gb|EEF51668.1| calnexin, putative [Ricinus
JMFN008A14Sequence492009823 (3)ref|XP_009792195.1|4e-06PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF034C10+ TATTGCAGCAGTTGGAATTGAGATATGGACAATGCAAGATGGTATCTTGTTTGACAATA
                      ____________________________________________________________
consensus TATTGCAGCAGTTGGAATTGAGATATGGACAATGCAAGATGGTATCTTGTTTGACAATA
 
. : . : . : . : . : . :
rJMFF034C10+ TCCTGATCAGCAGTGACGAAAAAGTTGCAGAATCGTACAGAAAGACTGCATGGAAGCCTA
                      ____________________________________________________________
consensus TCCTGATCAGCAGTGACGAAAAAGTTGCAGAATCGTACAGAAAGACTGCATGGAAGCCTA
 
. : . : . : . : . : . :
rJMFF034C10+ AGTTTGATATAGAGAAAGAGAAACAGAAGGCTGAGGAAGATTCATCTTCTGATGGTCTAA
rJMFF047D09+ AA
                      ____________________________________________________________
consensus AGTTTGATATAGAGAAAGAGAAACAGAAGGCTGAGGAAGATTCATCTTCTGATGGTCTAA
 
. : . : . : . : . : . :
rJMFF034C10+ AAGGTTTCCAGAAGACAGTATTTGATCTCCTATACAAGATTACGGACCTCCCCGTCTTGG
JMFN008A14- TATACAAGATTACGGACCTCCCCGTCTTGG
rJMFF047D09+ AAGGTTTCCAGAAGACAGTATTTGATCTCCTATACAAGATTACGGACCTCCCCGTCTTGG
                      ____________________________________________________________
consensus AAGGTTTCCAGAAGACAGTATTTGATCTCCTATACAAGATTACGGACCTCCCCGTCTTGG
 
. : . : . : . : . : . :
rJMFF034C10+ GTGAACACAAGGGCAAAGTACTGGATCTACTGGAGAAGGCTGAGACGCAACCTAACCTCA
JMFN008A14- GTGAACACAAGGGCAAAGTACTGGATCTACTGGAGAAGGCTGAGACGCAACCTAACCTCA
rJMFF047D09+ GTGAACACAAGGGCAAAGTACTGGATCTACTGGAGAAGGCTGAGACGCAACCTAACCTCA
                      ____________________________________________________________
consensus GTGAACACAAGGGCAAAGTACTGGATCTACTGGAGAAGGCTGAGACGCAACCTAACCTCA
 
. : . : . : . : . : . :
rJMFF034C10+ CAATAGGAATTATCATCTCCATCATTGTAGTTGTCCTCACAATTCTATTCAAGCTTCTCT
JMFN008A14- CAATAGGAATTATCATCTCCATCATTGTAGTTGTCCTCACAATTCTATTCAAGCTTCTCT
rJMFF047D09+ CAATAGGAATTATCATCTCCATCATGGTAGTTGTCCTCACAATTCTATTCAAGCTTCTCT
                      ____________________________________________________________
consensus CAATAGGAATTATCATCTCCATCATTGTAGTTGTCCTCACAATTCTATTCAAGCTTCTCT
 
. : . : . : . : . : . :
rJMFF034C10+ TTGGTGGAAAGAAGGCAGAAGCTGCTGCAGCTGTTAAGGAAAGCAAGAAGAGTGATGGTG
JMFN008A14- TTGGTGGAAAGAAGGCAGAAGCTGCTGCAGCTGTTAAGGAAAGCAAGAAGAGTGATGGTG
rJMFF047D09+ TTGGTGGAAAGAAGGCAGAAGCTGCTGCAGCTGTTAAGGAAAGCAAGAAGAGTGATGGTG
                      ____________________________________________________________
consensus TTGGTGGAAAGAAGGCAGAAGCTGCTGCAGCTGTTAAGGAAAGCAAGAAGAGTGATGGTG
 
. : . : . : . : . : . :
rJMFF034C10+ AAGAGAGTTCAAAAGGTGGAGGAGTCACTGAAGAGAAGGAAGAGAAAGAAGAGAAAGGGG
JMFN008A14- AAGAGAGTTCAAAAGGTGGAGGAGTCACTGAAGAGAAGGAAGAGAAAGAAGAGAAAGGGG
rJMFF047D09+ AAGAGAGTTCAAAAGGTGGAGGAGTCACTGAAGAGAAGGAAGAGAAAGAAGAGAAAGGGG
                      ____________________________________________________________
consensus AAGAGAGTTCAAAAGGTGGAGGAGTCACTGAAGAGAAGGAAGAGAAAGAAGAGAAAGGGG
 
. : . : . : . : . : . :
rJMFF034C10+ ATGGTGGAGCTGCTCCTCGCCGGAGGAGCACTAGACGGGATAATTAGGATTGAAAGAAGT
JMFN008A14- ATGGTGGAGCTGCTCCTCGCCGGAGGAGCACTAGACGGGATAATTAGGATTGAAAGAAGT
rJMFF047D09+ ATGGTGGAGCTGCTCCTCGCCGGAGGAGCACTAGACGGGATAATTAGGATTGAAAGAAGT
                      ____________________________________________________________
consensus ATGGTGGAGCTGCTCCTCGCCGGAGGAGCACTAGACGGGATAATTAGGATTGAAAGAAGT
 
. : . : . : . : . : . :
rJMFF034C10+ GGTAGTATAAAGAGATTGATTTTTGAAATCCTATTTGTTTTCCATGCTTGATTTTTCAGT
JMFN008A14- GGTAGTATAAAGAGATTGATTTTTGAAATCCTATTTGTTTTCCATGCTTGATTTTTCAGT
rJMFF047D09+ GGTAGTATAAAGAGATTGATTTTTGAAATCCTATTTGTTTTCCATGCTTGATTTTTCAGT
                      ____________________________________________________________
consensus GGTAGTATAAAGAGATTGATTTTTGAAATCCTATTTGTTTTCCATGCTTGATTTTTCAGT
 
. : . : . : . : . : . :
rJMFF034C10+ GGATTAGCGGCCCGCAAATTTTTGCTTTCCCTCGTATCGTCTTGTTCGGAAACATGGAAT
JMFN008A14- GGATTAGCGGCCCGCAAATTTTTGCTTTCCCTCGTATCGTCTTGTTCGGAAACATGGAAT
rJMFF047D09+ GGATTAGCGGCCCGCAAATTTTTGCTTTCCCTCGTATCGTCTTGTTCGGAAACATGGAAT
                      ____________________________________________________________
consensus GGATTAGCGGCCCGCAAATTTTTGCTTTCCCTCGTATCGTCTTGTTCGGAAACATGGAAT
 
. : . : . : . : . : . :
rJMFF034C10+ GTAGGGCAATCAGTCAGCAATG
JMFN008A14- GTAGGGCAATCAGTCAGCAATGTGTAATGAGACTGTTCGGAC
rJMFF047D09+ GTAGGGCAATCAGTCAGCAATGTGTAATGAGACTGTTCGGACATGATCAANCGGATTATT
                      ____________________________________________________________
consensus GTAGGGCAATCAGTCAGCAATGTGTAATGAGACTGTTCGGACATGATCAANCGGATTATT
 
. : . : . : . : . : . :
rJMFF047D09+ TTTTTCACTAATXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TTTTTCACTAATNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG