Contig 009807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013G15Sequence554004510 (3)ref|XP_009607456.1|3e-85PREDICTED: pyruvate decarboxylase 1 [Nicotiana tomentosiformis]724009807 (3)ref|XP_002305755.2|5e-67pyruvate decarboxylase family protein [Populus trichocarpa] gb|EEE86266.2| pyruv
JMFF045K22Sequence654004510 (3)ref|XP_009607456.1|4e-106PREDICTED: pyruvate decarboxylase 1 [Nicotiana tomentosiformis]654009807 (3)ref|XP_002305755.2|5e-43pyruvate decarboxylase family protein [Populus trichocarpa] gb|EEE86266.2| pyruv
JMFS070H09Sequence627009807 (3)gb|AAY86034.1|9e-109pyruvate decarboxylase, partial [Citrus sinensis]

Alignment

This contig is upended


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JMFS070H09-                                                              GACACTGCA
                      ____________________________________________________________
consensus                                                                GACACTGCA
 
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JMFS070H09-           GTGATTGCAGAGACGGGAGACTCGTGGTTCAACTGCCAAAAGCTCCGTCTCCCTGAGAAT
                      ____________________________________________________________
consensus             GTGATTGCAGAGACGGGAGACTCGTGGTTCAACTGCCAAAAGCTCCGTCTCCCTGAGAAT
 
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JMFS070H09-           TGCGGGTATGAATTCCAGATGCAGTTTGGATCAATTGGATGGTCTGTGGGTGCAACTCTT
rJMFF013G15+            CGGGTATGAATTCCAGATGCAGTTTGGATCAATTGGATGGTCTGTGGGTGCAACTCTT
                      ____________________________________________________________
consensus             TGCGGGTATGAATTCCAGATGCAGTTTGGATCAATTGGATGGTCTGTGGGTGCAACTCTT
 
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JMFS070H09-           GGCTATGCTCAGGCTGCAAAGCAGAAGCGCGTTATTGCCTGCATTGGAGATGGAAGTTTC
rJMFF013G15+          GGCTATGCTCAGGCTGCAAAGCAGAAGCGCGTTATTGCCTGCATTGGAGATGGAAGTTTC
                      ____________________________________________________________
consensus             GGCTATGCTCAGGCTGCAAAGCAGAAGCGCGTTATTGCCTGCATTGGAGATGGAAGTTTC
 
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JMFS070H09-           CAGGTGACAGCTCAAGATATATCAACCATGATGCGGTGTGGACAACGAAGTATCATATTT
rJMFF013G15+          CAGGTGACAGCTCAAGATATATCAACCATGATGCGGTGTGGACAACGAAGTATCATATTT
rJMFF045K22+                ACAGCTCAAGATATATCAACCATGATGCGGTGTGGACAACGAAGTATCATATTT
                      ____________________________________________________________
consensus             CAGGTGACAGCTCAAGATATATCAACCATGATGCGGTGTGGACAACGAAGTATCATATTT
 
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JMFS070H09-           CTCATCAACAATGGAGGCTACACAATTGAAGTGGAAATTCATGACGGTCCATATAACGTG
rJMFF013G15+          CTCATCAACAATGGAGGCTACACAATTGAAGTGGAAATTCATGACGGTCCATATAACGTG
rJMFF045K22+          CTCATCAACAATGGAGGCTACACAATTGAAGTGGAAATTCATGACGGTCCATATAACGTG
                      ____________________________________________________________
consensus             CTCATCAACAATGGAGGCTACACAATTGAAGTGGAAATTCATGACGGTCCATATAACGTG
 
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JMFS070H09-           ATCAAGAATTGGGACTACACCGGTCTTGTCAACGCTGTCCACAATGGACAGGGCAAATGT
rJMFF013G15+          ATCAAGAATTGGGACTACACCGGTCTTGTCAACGCTGTCCACAATGGACAGGGCAAATGT
rJMFF045K22+          ATCAAGAATTGGGACTACACCGGTCTTGTCAACGCTGTCCACAATGGACAGGGCAAATGT
                      ____________________________________________________________
consensus             ATCAAGAATTGGGACTACACCGGTCTTGTCAACGCTGTCCACAATGGACAGGGCAAATGT
 
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JMFS070H09-           TGGACC-AAAAAAGTAAAAACAGAGGAAGAATTAATAGAAGCAATTGCGACCGCGACGAG
rJMFF013G15+          TGGACCAAAAAAAGTAAAAACAGAGGAAGAATTAATAGAAGCAATTGCGACCGCGACGAG
rJMFF045K22+          TGGACCAAAAAAAGTAAAAACAGAGGAAGAATTAATAGAAGCAATTGCGACCGCGACGAG
                      ____________________________________________________________
consensus             TGGACCAAAAAAAGTAAAAACAGAGGAAGAATTAATAGAAGCAATTGCGACCGCGACGAG
 
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JMFS070H09-           TACACACAAGGACTCGTTATGCTTCATTGAAGTTATTGTGCACAAGGATGACACAAGCAA
rJMFF013G15+          TACACACAAGGACTCGTTATGCTTCATTGAAGTTATTGTGCACAAGGATGACACAAGCAA
rJMFF045K22+          TACACACAAGGACTCGTTATGCTTCATTGAAGTTATTGTGCACAAGGATGACACAAGCAA
                      ____________________________________________________________
consensus             TACACACAAGGACTCGTTATGCTTCATTGAAGTTATTGTGCACAAGGATGACACAAGCAA
 
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JMFS070H09-           AGAGCTATTGGAATGGGGTTCCCGCGTTTCTTCTGCTAATAGTCGCCCCCCTAATCCTCA
rJMFF013G15+          AGAGCTATTGGAATGGGGTTCCCGCGTTTCTTCTGCTAATAGTCGCCCCCCTAATCCTCA
rJMFF045K22+          AGAGCTATTGGAATGGGGTTCCCGCGTTTCTTCTGCTAATAGTCGCCCCCCTAATCCTCA
                      ____________________________________________________________
consensus             AGAGCTATTGGAATGGGGTTCCCGCGTTTCTTCTGCTAATAGTCGCCCCCCTAATCCTCA
 
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JMFS070H09-           ATAGCAACCCCAAGATGATGAAAATGTACAGTCCGACCAAACAGTTGGAGTTGATGATCC
rJMFF013G15+          ATAGCAACCCCAAGATGATGAAAATGTACAGTCCGACCAAACAGTTGGAGTTGATGATCC
rJMFF045K22+          ATAGCAACCCCAAGATGATGAAAATGTACAGTCCGACCAAACAGTTGGAGTTGATGATCC
                      ____________________________________________________________
consensus             ATAGCAACCCCAAGATGATGAAAATGTACAGTCCGACCAAACAGTTGGAGTTGATGATCC
 
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JMFS070H09-           ATCCACACATTCGGACCGT                                         
rJMFF013G15+          ATCCACACATTCGGACCGTAGAAATAATAACAATAATAATGTTAATTTTACCTTTGCCAT
rJMFF045K22+          ATCCACACATTCGGACCGTAGAAATAATAACAATAATAATGTTAATTTTACCTTTGCCAT
                      ____________________________________________________________
consensus             ATCCACACATTCGGACCGTAGAAATAATAACAATAATAATGTTAATTTTACCTTTGCCAT
 
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rJMFF013G15+          TGTTGTTGTGCTGTTCTCTTGTTTCCTGACCAGGAAGTTCAGCTTCCGAAAAATGTAATA
rJMFF045K22+          TGTTGTTGTGCTGTTCTCTTGTTTCCTGACCAGGAAGTTCAGCTTCCGAAAAATGTAATA
                      ____________________________________________________________
consensus             TGTTGTTGTGCTGTTCTCTTGTTTCCTGACCAGGAAGTTCAGCTTCCGAAAAATGTAATA
 
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rJMFF013G15+          CTACATCCGCTCATTTTTTTAGTACTATTTTAGTGGTCTATTATATT             
rJMFF045K22+          CTACATCCGCTCATTTTTTTAGTACTATTTTAGTGGTCTATTATATTTGAATAAAATTTT
                      ____________________________________________________________
consensus             CTACATCCGCTCATTTTTTTAGTACTATTTTAGTGGTCTATTATATTTGAATAAAATTTT
 
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rJMFF045K22+          AATGAAAATTTAATTTTCGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AATGAAAATTTAATTTTCGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG