Contig 009806:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017D05+                                                         AATCATCCATAAC
                      ____________________________________________________________
consensus                                                            AATCATCCATAAC
 
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rJMSF017D05+          TCTCAAGGTCCATCACCTCGCTTCTATTGCCTAATGTCCATTCTGCTATTACTGAAGAGC
                      ____________________________________________________________
consensus             TCTCAAGGTCCATCACCTCGCTTCTATTGCCTAATGTCCATTCTGCTATTACTGAAGAGC
 
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rJMSF017D05+          AGAATGTAATCCCGGGTATGCATGATATTGTAGGCATCCTTTTAATGCCGAAGACTCATT
                      ____________________________________________________________
consensus             AGAATGTAATCCCGGGTATGCATGATATTGTAGGCATCCTTTTAATGCCGAAGACTCATT
 
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rJMSF017D05+          CTCCTCCAGCTCTTCATTGTTTCCATATTCCTGTCCCCGTCCTTTTTCCTCCTCTCCTTG
                      ____________________________________________________________
consensus             CTCCTCCAGCTCTTCATTGTTTCCATATTCCTGTCCCCGTCCTTTTTCCTCCTCTCCTTG
 
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rJMSF017D05+          TTATTAATTTTCCCGTTCTCAGTTTCTATTTCTGCTCTTTAGTTCCGAAAATGTGGTATC
rJMFF045J24+                                                   GTTCCGAAAATGTGGTATC
                      ____________________________________________________________
consensus             TTATTAATTTTCCCGTTCTCAGTTTCTATTTCTGCTCTTTAGTTCCGAAAATGTGGTATC
 
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rJMSF017D05+          TTTGTGGCAATGTTTTACATAACTTTGTATTGTGTCAAAACGTGACAAGATGTGTCACTT
rJMFF045J24+          TTTGTGGCAATGTTTTACATAACTTTGTATTGTGTCAAAACGTGACAAGATGTGTCACTT
                      ____________________________________________________________
consensus             TTTGTGGCAATGTTTTACATAACTTTGTATTGTGTCAAAACGTGACAAGATGTGTCACTT
 
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rJMSF017D05+          GAACTGATCTTCTTTCTTCACAAGAGCTTTATTTTTTATGCTCTTCTGTAAACATGGATA
rJMFF045J24+          GAACTGATCTTCTTTCTTCACAAGAGCTTTATTTTTTATGCTCTTCTGTAAACATGGATA
                      ____________________________________________________________
consensus             GAACTGATCTTCTTTCTTCACAAGAGCTTTATTTTTTATGCTCTTCTGTAAACATGGATA
 
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rJMSF017D05+          TAAGCTCAGGGTATGTACAGGTCTACCATGGAAAGTTTCAGTAACTGCTGTTTCACCCCC
rJMFF045J24+          TAAGCTCAGGGTATGTACAGGTCTACCATGGAAAGTTTCAGTAACTGCTGTTTCACCCCC
                      ____________________________________________________________
consensus             TAAGCTCAGGGTATGTACAGGTCTACCATGGAAAGTTTCAGTAACTGCTGTTTCACCCCC
 
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rJMSF017D05+          GTTCTTCTCTCCACCTTTGGGGAAAAAAGAGAAGAAAAACGCATCTTATTCACCTGCAGA
rJMFF045J24+          GTTCTTCTCTCCACCTTTGGGGAAAAAAGAGAAGAAAAACGCATCTTATTCACCTGCAGA
                      ____________________________________________________________
consensus             GTTCTTCTCTCCACCTTTGGGGAAAAAAGAGAAGAAAAACGCATCTTATTCACCTGCAGA
 
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rJMSF017D05+          GATGTGGCTGTGTTTCGGGAGAAGATGATTTAGTTCCGAGTTCTGCAGGTTCCATACGAA
rJMFF045J24+          GATGTGGCTGTGTTTCGGGAGAAGATGATTTAGTTCCGAGTTCTGCAGGTTCCATACGAA
                      ____________________________________________________________
consensus             GATGTGGCTGTGTTTCGGGAGAAGATGATTTAGTTCCGAGTTCTGCAGGTTCCATACGAA
 
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rJMSF017D05+          GACATTCTCTAGGCTGGCTTTTAACTCTTGACGACAGATTTATAATAATCAGATGTCATT
rJMFF045J24+          GACATTCTCTAGGCTGGCTTTTAACTCTTGACGACAGATTTATAATAATCAGATGTCATT
                      ____________________________________________________________
consensus             GACATTCTCTAGGCTGGCTTTTAACTCTTGACGACAGATTTATAATAATCAGATGTCATT
 
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rJMSF017D05+          GTTTCTCTAGGATTCCTGGATTACATTATGCCGAATTTTTTTTCGCAAGCTTAATTTGCA
rJMFF045J24+          GTTTCTCTAGGATTCCTGGATTACATTATGCCGAA-TTTTTTTCGCAAGCTTAATTTGCA
                      ____________________________________________________________
consensus             GTTTCTCTAGGATTCCTGGATTACATTATGCCGAATTTTTTTTCGCAAGCTTAATTTGCA
 
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rJMSF017D05+          TTACCATGTGTTGTAAATTTGGTGAAGGATGCATCCCTGCAGATATTGTGCTCTGCTTCT
rJMFF045J24+          TTACCATGTGTTGTAAATTTGGTGAAGGATGCATCCCTGCAGATATTGTGCTCTGCTTCT
                      ____________________________________________________________
consensus             TTACCATGTGTTGTAAATTTGGTGAAGGATGCATCCCTGCAGATATTGTGCTCTGCTTCT
 
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rJMSF017D05+          CCATGCATTCTGAACTGT                                          
rJMFF045J24+          CCATGCATTCTGAACTGTTAACATTTATGTTGAATGTCAGATCTCTATTAGTTTTGCTGG
                      ____________________________________________________________
consensus             CCATGCATTCTGAACTGTTAACATTTATGTTGAATGTCAGATCTCTATTAGTTTTGCTGG