| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011B02 | Sequence | 462 | 006067 (4) | 757 | 009786 (3) | ref|XP_006348324.1| | 1e-127 | PREDICTED: uncharacterized protein LOC102585938 isoform X1 [Solanum tuberosum] | |||
| JMFF043M19 | Sequence | 630 | 006067 (4) | ref|XP_009768996.1| | 5e-15 | PREDICTED: uncharacterized protein LOC104219927 isoform X1 [Nicotiana sylvestri | 658 | 009786 (3) | ref|XP_006348324.1| | 6e-72 | PREDICTED: uncharacterized protein LOC102585938 isoform X1 [Solanum tuberosum] |
| JMSF048B10 | Sequence | 649 | 006067 (4) | ref|XP_011098193.1| | 118 | PREDICTED: uncharacterized protein LOC105176924 [Sesamum indicum] ref|XP_0110981 | 792 | 009786 (3) | ref|XP_006348324.1| | 4e-139 | PREDICTED: uncharacterized protein LOC102585938 isoform X1 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF048B10+ CAGCTGGACCAGTTCTATTTGT
____________________________________________________________
consensus CAGCTGGACCAGTTCTATTTGT
. : . : . : . : . : . :
rJMSF048B10+ TCGTGATTCNACACTCCTTTTGCCTGTTCACTTGTCAAAACAACATTTNGCTTGGTATGG
rJMFF011B02+ GTCAAAACAACATTTGCTTTGGTATGG
____________________________________________________________
consensus TCGTGATTCNACACTCCTTTTGCCTGTTCACTTGTCAAAACAACATTTGGTTTGGTATGG
. : . : . : . : . : . :
rJMSF048B10+ CTATGACAGAAAGCATGGAATGCATTCTCTTTGTCCGGCTGTGTGGTCAAAACAGCGAAA
rJMFF011B02+ CTATGACAGAAAGCATGGAATGCATTCTCTTTGTCCGGCTGTGTGGTCAAAACAGCGAAA
____________________________________________________________
consensus CTATGACAGAAAGCATGGAATGCATTCTCTTTGTCCGGCTGTGTGGTCAAAACAGCGAAA
. : . : . : . : . : . :
rJMSF048B10+ GTGGCTGTGTATGTCAATGATCTGTCTCAGTCCTTTGTCTTGTTCATTTATGGACTTGCA
rJMFF011B02+ GTGGCTGTGTATGTCAATGATCTGTCTCAGTCCTTTGTCTTGTTCATTTATGGACTTGCA
____________________________________________________________
consensus GTGGCTGTGTATGTCAATGATCTGTCTCAGTCCTTTGTCTTGTTCATTTATGGACTTGCA
. : . : . : . : . : . :
rJMSF048B10+ GTTTCCAAATGGTCAAATAACCTATATATCTGGAGAGGGCCTATCCACCAGTGCTTTTGT
rJMFF011B02+ GTTTCCAAATGGTCAAATAACCTATATATCTGGAGAGGGCCTATCCACCAGTGCCTTTGT
rJMFF043M19+ GTTTCCAAATGGTCAAATAACCTATATATCTGGAGAGGGCCTATCCACCAGTGCC-TTGT
____________________________________________________________
consensus GTTTCCAAATGGTCAAATAACCTATATATCTGGAGAGGGCCTATCCACCAGTGCCTTTGT
. : . : . : . : . : . :
rJMSF048B10+ ACCTCTGTGTGGAGGTTTACTTCAAGCCCAGGGCCAATATCCAGGAGACATCAAGCTCAG
rJMFF011B02+ ACCTCTGTGTGGAGGTTTACTTCAAGCCCAGGGCCAATATCCAGGAGACATCAAGCTCAG
rJMFF043M19+ ACCTCTGTGTGGAGG-TTACTTCAAGCCCAGGGCCAATATCCAGGAGACATCAAGCTCAG
____________________________________________________________
consensus ACCTCTGTGTGGAGGTTTACTTCAAGCCCAGGGCCAATATCCAGGAGACATCAAGCTCAG
. : . : . : . : . : . :
rJMSF048B10+ TTTCTCTTGCAAGACTAACTGGGGGACAAGCATCACACCCACACTACAGTGGCCTGACAA
rJMFF011B02+ TTTCTCTTGCAAGACTAACTGGGGGACAAGCATCACACCCACACTACAGTGGCCTGACAA
rJMFF043M19+ TTTCTCTTGCAAGACTAACTGGGGGACAAGCATCACACCCACACTACAGTGGCCTGACAA
____________________________________________________________
consensus TTTCTCTTGCAAGACTAACTGGGGGACAAGCATCACACCCACACTACAGTGGCCTGACAA
. : . : . : . : . : . :
rJMSF048B10+ GTCATTTACCCTGGGCCTTGCACAGCCATTGGCGTGGAAGAGATCTGGTCTCATGTATAG
rJMFF011B02+ GTCATTTACCCTGGGCCTTGCACAGCCATTGGCGTGGAAGAGATCTGGTCTCATGTATAG
rJMFF043M19+ GTCATTTACCCTGGGCCTTGCACAGCCATTGGCGTGGAAGAGATCTGGTCTCATGTATAG
____________________________________________________________
consensus GTCATTTACCCTGGGCCTTGCACAGCCATTGGCGTGGAAGAGATCTGGTCTCATGTATAG
. : . : . : . : . : . :
rJMSF048B10+ ACCTACTGTTCAGTTGAGTTTATATCCCACATATGGCGGAAGTAACCCCGGGGTGCAGGC
rJMFF011B02+ ACCTACTGTTCAGTTGAGTTTATATCCCACATATGGCGGAAGTAACCCCGGGGTGCAGGC
rJMFF043M19+ ACCTACTGTTCAGTTGAGTTTATATCCCACATATGGCGGAAGTAACCCCGGGGTGCAGGC
____________________________________________________________
consensus ACCTACTGTTCAGTTGAGTTTATATCCCACATATGGCGGAAGTAACCCCGGGGTGCAGGC
. : . : . : . : . : . :
rJMSF048B10+ TGAAATTACACATTCTCTTAAGAAAGAGCTAAATCTCATCTGCGGATGTGCGCTTGCAAG
rJMFF011B02+ TGAAATTACACATTCTCTTAAGAAAGAGCTAAATCTCATCTGCGGATGTGCGCTTGCAAG
rJMFF043M19+ TGAAATTACACATTCTCTTAAGAAAGAGCTAAATCTCATCTGCGGATGTGCGCTTGCAAG
____________________________________________________________
consensus TGAAATTACACATTCTCTTAAGAAAGAGCTAAATCTCATCTGCGGATGTGCGCTTGCAAG
. : . : . : . : . : . :
rJMSF048B10+ GCATTCTTCTGCATTTGCATCATTATCTCTTGGGAGGTCCAAGTGGAATGGAAATGTTGG
rJMFF011B02+ GCATTCTTCTGCATTTGCATCATTATCTCTTGGGAGGTCCAAGTGGAATGGAAATGTTGG
rJMFF043M19+ GCATTCTTCTGCATTTGCATCATTATCTCTTGGGAGGTCCAAGTGGAATGGAAATGTTGG
____________________________________________________________
consensus GCATTCTTCTGCATTTGCATCATTATCTCTTGGGAGGTCCAAGTGGAATGGAAATGTTGG
. : . : . : . : . : . :
rJMSF048B10+ GAGCTCAGGGATGGTTTTCAAGGTTGAAACTCCGATTGGGCGAGCTGGCAACCCTTCCTT
rJMFF011B02+ GAGCTCAGGGATGGTTTTCAAGGTTGAAACTCCGATTGGGCGAGCTGGCAACCCTTCCTT
rJMFF043M19+ GAGCTCAGGGATGGTTTTCAAGGTTGAAACTCCGATTGGGCGAGCTGGCAACCCTTCCTT
____________________________________________________________
consensus GAGCTCAGGGATGGTTTTCAAGGTTGAAACTCCGATTGGGCGAGCTGGCAACCCTTCCTT
. : . : . : . : . : . :
rJMSF048B10+ CTCAGTACAGTTCAATAGTGGATTTGAGCTTTGAATTGTGGTGTTTTGTTTTCTTTGGTG
rJMFF011B02+ CTCAGTACAGTTCAATAGTGGATTTGAGCTTTGAATTGTGGTGTTTTGTTTTCTTTGGTG
rJMFF043M19+ CTCAGTACAGTTCAATAGTGGATTTGAGCTTTGAATTGTGGTGTTTTGTTTTCTTTGGTG
____________________________________________________________
consensus CTCAGTACAGTTCAATAGTGGATTTGAGCTTTGAATTGTGGTGTTTTGTTTTCTTTGGTG
. : . : . : . : . : . :
rJMSF048B10+ CTGGTGCTGTCAAAATGTTAATAGCTTGATGTCATAGCATCATTAAAACA
rJMFF011B02+ CTGGTGCTGTCAAAATGTTTATAGCTTGATGTCATAGCATCATTAAAACATATATTTTG
rJMFF043M19+ CTGGTGCTGTCAAAATGTTAATAGCTTGATGTCATAGCATCATTAAAACATATATTTTGT
____________________________________________________________
consensus CTGGTGCTGTCAAAATGTTAATAGCTTGATGTCATAGCATCATTAAAACATATATTTTGT
. : . : . : . : . : . :
rJMFF043M19+ GAATAACAACAATATTTTGCAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus GAATAACAACAATATTTTGCAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG