| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007E10 | Sequence | 592 | 006224 (6) | ref|XP_009772957.1| | 7e-76 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Nicotiana sylvestris] | 752 | 009776 (5) | ref|XP_009607618.1| | 4e-80 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to |
| JMFF025P14 | Sequence | 576 | 006224 (6) | ref|XP_009772957.1| | 2e-75 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Nicotiana sylvestris] | 803 | 009776 (5) | ref|XP_009607618.1| | 6e-66 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to |
| JMFF037N07 | Sequence | 159 | 006224 (6) | 779 | 009776 (5) | ref|XP_009607618.1| | 1e-59 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to | |||
| JMFF042L16 | Sequence | 632 | 006224 (6) | ref|XP_009772957.1| | 8e-90 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Nicotiana sylvestris] | 559 | 009776 (5) | ref|XP_009607618.1| | 6e-12 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to |
| JMSF012E23 | Sequence | 216 | 006224 (6) | 721 | 009776 (5) | ref|XP_004303295.1| | 6e-52 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Fragaria vesca subsp. v | |||
This contig is upended
. : . : . : . : . : . :
rJMFF007E10+ ATGGCGCAACGCATGTGACCACC
____________________________________________________________
consensus ATGGCGCAACGCATGTGACCACC
. : . : . : . : . : . :
rJMFF007E10+ AGAGTAAAGGGCACGCTCGGTTATCTTGCCCCGGAATACGCAATGCTAGGGAAGGCATCA
rJMFF025P14+ CCGGAATACGCAATGCTAGGGAAGGCATCA
rJMFF037N07+ GGCATCA
____________________________________________________________
consensus AGAGTAAAGGGCACGCTCGGTTATCTTGCCCCGGAATACGCAATGCTAGGGAAGGCATCA
. : . : . : . : . : . :
rJMFF007E10+ GAAAGCTGCGATGTTTTCAGCTTTGGCATTCTTTTACTAGAGCTCGCTAGTGGCAAGAAA
rJMSF012E23+ GCATTCTTTTACTAGAGCTCGCTAGTGGCAAGAAA
rJMFF025P14+ GAAAGCTGCGATGTTTTCAGCTTTGGCATTCTTTTACTAGAGCTCGCTAGTGGCAAGAAA
rJMFF037N07+ GAAAGCTGCGATGTTTTCAGCTTTGGCATTCTTTTACTAGAGCTCGCTAGTGGCAAGAAA
____________________________________________________________
consensus GAAAGCTGCGATGTTTTCAGCTTTGGCATTCTTTTACTAGAGCTCGCTAGTGGCAAGAAA
. : . : . : . : . : . :
rJMFF007E10+ CCGATAGAGAAGGTGAGTGCAACGATGAAGCGCACGATCACGGACTGGGCCCTACCTTTG
rJMSF012E23+ CCGATAGAGAAGGTGAGTGCAACGATGAAGCGCACGATCACGGACTGGGCCCTACCTTTG
rJMFF025P14+ CCGATAGAGAAGGTGAGTGCAACGATGAAGCGCACGATCACGGACTGGGCCCTACCTTTG
rJMFF037N07+ CCGATAGAGAAGGTGAGTGCAACGATGAAGCGCACGATCACGGACTGGGCCCTACCTTTG
____________________________________________________________
consensus CCGATAGAGAAGGTGAGTGCAACGATGAAGCGCACGATCACGGACTGGGCCCTACCTTTG
. : . : . : . : . : . :
rJMFF007E10+ GCCTGCGAAAGAAAATTCAGCGAACTTGCAGACCAAAGGTTGAATGGAAACTACGTGGAA
rJMSF012E23+ GCCTGCGAAAGAAAATTCAGCGAACTTGCAGACCAAAGGTTGAATGGAAACTACGTGGAA
rJMFF025P14+ GCCTGCGAAAGAAAATTCAGCGAACTTGCAGACCAAAGGTTGAATGGAAACTACGTGGAA
rJMFF037N07+ GCCTGCGAAAGAAAATTCAGCGAACTTGCAGACCAAAGGTTGAATGGAAACTACGTGGAA
____________________________________________________________
consensus GCCTGCGAAAGAAAATTCAGCGAACTTGCAGACCAAAGGTTGAATGGAAACTACGTGGAA
. : . : . : . : . : . :
rJMFF007E10+ GAAGAGCTAAAAAGAGTGGTCTACGTGGCACTCGTTTGTGCTCAAAACCAAGCTGAGAAG
rJMSF012E23+ GAAGAGCTAAAAAGAGTGGTCTACGTGGCACTCGTTTGTGCTCAAAACCAAGCTGAGAAG
rJMFF025P14+ GAAGAGCTAAAAAGAGTGGTCTACGTGGCACTCGTTTGTGCTCAAAACCAAGCTGAGAAG
rJMFF037N07+ GAAGAGCTAAAAAGAGTGGTCTACGTGGCACTCGTTTGTGCTCAAAACCAAGCTGAGAAG
rJMFF042L16+ TCAAAACCAAGCTGAGAAG
____________________________________________________________
consensus GAAGAGCTAAAAAGAGTGGTCTACGTGGCACTCGTTTGTGCTCAAAACCAAGCTGAGAAG
. : . : . : . : . : . :
rJMFF007E10+ AGACCAACAATGCTCGAGGTGGTTGAGATCCTGAAAGGCGAATCGAAGGAGAAGTTTGCC
rJMSF012E23+ AGACCAACAATGCTCGAGGTGGTTGAGATCCTGAAAGGCGAATCGAAGGAGAAGTTTGCC
rJMFF025P14+ AGACCAACAATGCTCGAGGTGGTTGAGATCCTGAAAGGCGAATCGAAGGAGAAGTTTGCC
rJMFF037N07+ AGACCAACAATGCTCGAGGTGGTTGAGATCCTGAAAGGCGAATCGAAGGAGAAGTTTGCC
rJMFF042L16+ AGACCAACAATGCTCGAGGTGGTTGAGATCCTGAAAGGCGAATCGAAGGAGAAGTTTGCC
____________________________________________________________
consensus AGACCAACAATGCTCGAGGTGGTTGAGATCCTGAAAGGCGAATCGAAGGAGAAGTTTGCC
. : . : . : . : . : . :
rJMFF007E10+ GCTCTAGAGAACGATGAACTGTTCAAAAATCCTCAGGCTGCTGCTAAAGACGAGTTATCT
rJMSF012E23+ GCTCTAGAGAACGATGAACTGTTCAAAAATCCTCAGGCTGCTGCTAAAGACGAGTTATCT
rJMFF025P14+ GCTCTAGAGAACGATGAACTGTTCAAAAATCCTCAGGCTGCTGCTAAAGACGAGTTATCT
rJMFF037N07+ GCTCTAGAGAACGATGAACTGTTCAAAAATCCTCAGGCTGCTGCTAAAGACGAGTTATCT
rJMFF042L16+ GCTCTAGAGAACGATGAACTGTTCAAAAATCCTCAGGCTGCTGCTAAAGACGAGTTATCT
____________________________________________________________
consensus GCTCTAGAGAACGATGAACTGTTCAAAAATCCTCAGGCTGCTGCTAAAGACGAGTTATCT
. : . : . : . : . : . :
rJMFF007E10+ GGAGCAGAGGACAGTTCAGAGTTCATCTCGGAGGAAAAAGAGGAAAAGGTACCACCAAAA
rJMSF012E23+ GGAGCAGAGGACAGTTCAGAGTTCATCTCGGAGGAAAAAGAGGAAAAGGTACCACCAAAA
rJMFF025P14+ GGAGCAGAGGACAGTTCAGAGTTCATCTCGGAGGAAAAAGAGGAAAAGGTACCACCAAAA
rJMFF037N07+ GGAGCAGAGGACAGTTCAGAGTTCATCTCGGAGGAAAAAGAGGAAAAGGTACCACCAAAA
rJMFF042L16+ GGAGCAGAGGACAGTTCAGAGTTCATCTCGGAGGAAAAAGAGGAAAAGGTACCACCAAAA
____________________________________________________________
consensus GGAGCAGAGGACAGTTCAGAGTTCATCTCGGAGGAAAAAGAGGAAAAGGTACCACCAAAA
. : . : . : . : . : . :
rJMFF007E10+ CAAGAAATCGAGAGAGTTGAAATCGGTTCCCCTCAAGTGAACTGATTCCCGGGGATCGTG
rJMSF012E23+ CAAGAAATCGAGAGAGTTGAAATCGGTTCCCCTCAAGTGAACTGATTCCCGGGGATCGTG
rJMFF025P14+ CAAGAAATCGAGAGAGTTGAAATCGGTTCCCCTCAAGTGAACTGATTCCCGGGGATCGTG
rJMFF037N07+ CAAGAAATCGAGAGAGTTGAAATCGGTTCCCCTCAAGTGAACTGATTCCCGGGGATCGTG
rJMFF042L16+ CAAGAAATCGAGAGAGTTGAAATCGGTTCCCCTCAAGTGAACTGATTCCCGGGGATCGTG
____________________________________________________________
consensus CAAGAAATCGAGAGAGTTGAAATCGGTTCCCCTCAAGTGAACTGATTCCCGGGGATCGTG
. : . : . : . : . : . :
rJMFF007E10+ CTTTCTGGTTTTCTTGCCCGTCCTCTCATAGTCGATGAGGTATTGTTTGGATATCCACAG
rJMSF012E23+ CTTTCTGGTTTTCTTGCCCGTCCTCTCATAGTCGATGAGGTATTGTTTGGATATCCACAG
rJMFF025P14+ CTTTCTGGTTTTCTTGCCCGTCCTCTCATAGTCGATGAGGTATTGTTTGGATATCCACAG
rJMFF037N07+ CTTTCTGGTTTTCTTGCCCGTCCTCTCATAGTCGATGAGGTATTGTTTGGATATCCACAG
rJMFF042L16+ CTTTCTGGTTTTCTTGCCCGTCCTCTCATAGTCGATGAGGTATTGTTTGGATATCCACAG
____________________________________________________________
consensus CTTTCTGGTTTTCTTGCCCGTCCTCTCATAGTCGATGAGGTATTGTTTGGATATCCACAG
. : . : . : . : . : . :
rJMFF007E10+ AAGGCTGCGAGTTTACAGCAGCCTGTGGGACTTCATTGCTTGTTGAATTGAAAGGATGAT
rJMSF012E23+ AAGGCTGCGAGTTTACAGCAGCCTGTGGGACTTCATTGCTTGTTGAATTGAAAGGATGAT
rJMFF025P14+ AAGGCTGCGAGTTTACAGCAGCCTGTGGGACTTCATTGCTTGTTGAATTGAAAGGATGAT
rJMFF037N07+ AAGGCTGCGAGTTTACAGCAGCCTGTGGGACTTCATTGCTTGTTGAATTGAAAGGATGAT
rJMFF042L16+ AAGGCTGCGAGTTTACAGCAGCCTGTGGGACTTCATTGCTTGTTGAATTGAAAGGATGAT
____________________________________________________________
consensus AAGGCTGCGAGTTTACAGCAGCCTGTGGGACTTCATTGCTTGTTGAATTGAAAGGATGAT
. : . : . : . : . : . :
rJMFF007E10+ TTGAATGTGTTGTGTGTGTGTGTGTGAATATTCTTGTTGTATGCTATTTTTAGTTCTTTT
rJMSF012E23+ TTGAATGTGTTGTGTGTGTGTGTGTGAATATTCTTGTTGTATGCTATTTTTAGTTCTTTT
rJMFF025P14+ TTGAATGTGTTGTGTGTGTGTGTGTGAATATTCTTGTTGTATGCTATTTTTAGTTCTTTT
rJMFF037N07+ TTGAATGTGT--TGTGTGTGTGTGTGAATATTCTTGTTGTATGCTATTTTTAGTTCTTTT
rJMFF042L16+ TTGAATGTGTTGTGTGTGTGTGTGTGAATATTCTTGTTGTATGCTATTTTTAGTTCTTTT
____________________________________________________________
consensus TTGAATGTGTTGTGTGTGTGTGTGTGAATATTCTTGTTGTATGCTATTTTTAGTTCTTTT
. : . : . : . : . : . :
rJMFF007E10+ AATCAAAAC
rJMSF012E23+ AATCAAAACTTGAAAAATGTACAAGCTGTGCTGTGCTGTCATTGGATCATCATAGACAAG
rJMFF025P14+ AATCAAAACTTGAAAAATGTACAAGCTGTGCTGTGCTGTCATTGGATCATCATAGACAAG
rJMFF037N07+ AATCAAAACTTGAAAAATGTACAAGCTGTGCTGTGCTGTCATTGGATCATCATAGACAAG
rJMFF042L16+ AATCAAAACTTGAAAAATGTACAAGCTGTGCTGTGCTGTCATTGGATCATCATAGACAAG
____________________________________________________________
consensus AATCAAAACTTGAAAAATGTACAAGCTGTGCTGTGCTGTCATTGGATCATCATAGACAAG
. : . : . : . : . : . :
rJMSF012E23+ AGGATTATTATATCTT
rJMFF025P14+ AGGATTATTATATCTTTTTAGGGAATTTGGGTTGAAATTAATGG
rJMFF037N07+ AGGATTATTATATCTTTTTAGGGAATTTGGGTTGAAATTAATGG
rJMFF042L16+ AGGATTATTATATCTTTTTAGGGAATTTGGGTTGAAATTAATGGTGAAAACACATTTGGT
____________________________________________________________
consensus AGGATTATTATATCTTTTTAGGGAATTTGGGTTGAAATTAATGGTGAAAACACATTTGGT