Contig 009770:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042A17Sequence609003256 (2)ref|XP_009610155.1|218PREDICTED: A/G-specific adenine DNA glycosylase [Nicotiana tomentosiformis]607009770 (2)ref|XP_009769615.1|160PREDICTED: A/G-specific adenine DNA glycosylase [Nicotiana sylvestris]
JMSF036K14Sequence671003256 (2)ref|XP_009610155.1|273PREDICTED: A/G-specific adenine DNA glycosylase [Nicotiana tomentosiformis]717009770 (2)ref|XP_004246789.2|8e-74PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


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rJMSF036K14+          GTCAGTTGTAGTTACAGATTTCCCGACAAAAGTAGTCAAGGCCAAACAGAGGCATGATTA
                      ____________________________________________________________
consensus             GTCAGTTGTAGTTACAGATTTCCCGACAAAAGTAGTCAAGGCCAAACAGAGGCATGATTA
 
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rJMSF036K14+          TTCTGCCGTGACTGTAGTGGAAATACTAGAAAGCCAGGACATGGAAGAACACGAATCTAA
                      ____________________________________________________________
consensus             TTCTGCCGTGACTGTAGTGGAAATACTAGAAAGCCAGGACATGGAAGAACACGAATCTAA
 
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rJMSF036K14+          CAGTAAGTTTCTCATTGTAAAGAGACCAAACGAGGGTTTGCTCGCTGGGCTCTGGGAGTT
rJMFF042A17+                                                               GGGAGTT
                      ____________________________________________________________
consensus             CAGTAAGTTTCTCATTGTAAAGAGACCAAACGAGGGTTTGCTCGCTGGGCTCTGGGAGTT
 
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rJMSF036K14+          TCCGTCCGTCTTGTTAGATGGAGAAGCTGACTTGACCTCGAGAAGAAAGGCTACAGACAA
rJMFF042A17+          TCCGTCCGTCTTGTTAGATGGAGAAGCTGACTTGACCTCGAGAAGAAAGGCTACAGACAA
                      ____________________________________________________________
consensus             TCCGTCCGTCTTGTTAGATGGAGAAGCTGACTTGACCTCGAGAAGAAAGGCTACAGACAA
 
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rJMSF036K14+          TCTTCTCAGATCCTCATTCAACTTAGACACTAAAAGGTTATACAGTGTAAATTCAAGGGA
rJMFF042A17+          TCTTCTCAGATCCTCATTCAACTTAGACACTAAAAGGTTATACAGTGTAAATTCAAGGGA
                      ____________________________________________________________
consensus             TCTTCTCAGATCCTCATTCAACTTAGACACTAAAAGGTTATACAGTGTAAATTCAAGGGA
 
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rJMSF036K14+          ACATGTTGGAGAATATGTTCACATCTTCACTCATATTCGTCTTAAGATGTACATAGAGCT
rJMFF042A17+          ACATGTTGGAGAATATGTTCACATCTTCACTCATATTCGTCTTAAGATGTACATAGAGCT
                      ____________________________________________________________
consensus             ACATGTTGGAGAATATGTTCACATCTTCACTCATATTCGTCTTAAGATGTACATAGAGCT
 
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rJMSF036K14+          GTTGGTCCTGTGTCCAAAAGGAACAAGAAATGTGCCTGGTAGGAAAGAAGGTAAGGAGGA
rJMFF042A17+          GTTGGTCCTGTGTCCAAAAGGAACAAGAAATGTGCCTGGTAGGAAAGAAGGTAAGGAGGA
                      ____________________________________________________________
consensus             GTTGGTCCTGTGTCCAAAAGGAACAAGAAATGTGCCTGGTAGGAAAGAAGGTAAGGAGGA
 
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rJMSF036K14+          GACTGCAATGTGGAAATATGTTGACAAAAAGGAACTTTCTACCATGGGATTAACATCTGG
rJMFF042A17+          GACTGCAATGTGGAAATATGTTGACAAAAAGGAACTTTCTACCATGGGATTAACATCTGG
                      ____________________________________________________________
consensus             GACTGCAATGTGGAAATATGTTGACAAAAAGGAACTTTCTACCATGGGATTAACATCTGG
 
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rJMSF036K14+          AGTTAGAAAAGTGTATGACATGATTCAGAAGTACAAACAAAGTAAATTGGATTCAATCTC
rJMFF042A17+          AGTTAGAAAAGTGTATGACATGATTCAGAAGTACAAACAAAGTAAATTGGATTCAATCTC
                      ____________________________________________________________
consensus             AGTTAGAAAAGTGTATGACATGATTCAGAAGTACAAACAAAGTAAATTGGATTCAATCTC
 
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rJMSF036K14+          AGAGAAACAAAGACTGAGAAAGTAGATTGTAGTGCCACTTGAAGCACACCAATTGAGAAA
rJMFF042A17+          AGAGAAACAAAGACTGAGAAAGTAGATTGTAGTGCCACTTGAAGCACACCAATTGAGAAA
                      ____________________________________________________________
consensus             AGAGAAACAAAGACTGAGAAAGTAGATTGTAGTGCCACTTGAAGCACACCAATTGAGAAA
 
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rJMSF036K14+          GTATTTTGGCTCAAGAAAAACCATAACAATTTTTTTTGGGGTGACGAGGGAAACAAGTAA
rJMFF042A17+          GTATTTTGGCTCAAGAAAAACCATAACAATTTTTTTTGGGGTGACGAGGGAAACAAGTAA
                      ____________________________________________________________
consensus             GTATTTTGGCTCAAGAAAAACCATAACAATTTTTTTTGGGGTGACGAGGGAAACAAGTAA
 
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rJMSF036K14+          GCACTACTGGGATATGTACTGAGTAAACGAGAGAAATTAGCAGGCACTATTGAA      
rJMFF042A17+          GCACTACTGGGATATGTACTGAGTAAACGAGAGAAATTAGCAGGCACTATTGAAGGTGTA
                      ____________________________________________________________
consensus             GCACTACTGGGATATGTACTGAGTAAACGAGAGAAATTAGCAGGCACTATTGAAGGTGTA
 
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rJMFF042A17+          GACTGTTCTTGTGTTTGATTGAAAAAGTATTTATAAAAATGGAACTCAAATATTTCACTC
                      ____________________________________________________________
consensus             GACTGTTCTTGTGTTTGATTGAAAAAGTATTTATAAAAATGGAACTCAAATATTTCACTC