Contig 009755:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039M09Sequence578009755 (2)ref|XP_009798156.1|120PREDICTED: gibberellin-regulated protein 9-like [Nicotiana sylvestris]587009755 (2)ref|XP_009798156.1|120PREDICTED: gibberellin-regulated protein 9-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF039M09- ATCTTTCTTCTCCAAACATGAAAATCTTCTCAATCTTCTTCATCGCC
rJMFF039M09+ ATCTTTCTTCTCCAAACATGAAAATCTTCTCAATCTTCTTCATCGCC
                      ____________________________________________________________
consensus ATCTTTCTTCTCCAAACATGAAAATCTTCTCAATCTTCTTCATCGCC
 
. : . : . : . : . : . :
JMFF039M09- ATTCTCCTCATACAGGGGTTTGGAGAGGCATTGCTCATGGATGACTTCAATAATTCTGTG
rJMFF039M09+ ATTCTCCTCATACAGGGGTTTGGAGAGGCATTGCTCATGGATGACTTCAATAATTCTGTG
                      ____________________________________________________________
consensus ATTCTCCTCATACAGGGGTTTGGAGAGGCATTGCTCATGGATGACTTCAATAATTCTGTG
 
. : . : . : . : . : . :
JMFF039M09- ACCCAAATCAATGAAGACGGTAGAGACGGAGCCCTTTTCAAAAAAAGTCATCATCCAAAA
rJMFF039M09+ ACCCAAATCAATGAAGACGGTAGAGACGGAGCCCTTTTCAAAAAAAGTCATCATCCAAAA
                      ____________________________________________________________
consensus ACCCAAATCAATGAAGACGGTAGAGACGGAGCCCTTTTCAAAAAAAGTCATCATCCAAAA
 
. : . : . : . : . : . :
JMFF039M09- ATAAATTGTGGACATGCATGCGCAAGAAGATGTAGGAAAGCATCAAGAAAGAATGTGTGC
rJMFF039M09+ ATAAATTGTGGACATGCATGCGCAAGAAGATGTAGGAAAGCATCAAGAAAGAATGTGTGC
                      ____________________________________________________________
consensus ATAAATTGTGGACATGCATGCGCAAGAAGATGTAGGAAAGCATCAAGAAAGAATGTGTGC
 
. : . : . : . : . : . :
JMFF039M09- AGCAGGGCATGCAAGACATGCTGCCGAAGATGCAACTGCGTCCCGCCGGGAACTTACGGC
rJMFF039M09+ AGCAGGGCATGCAAGACATGCTGCCGAAGATGCAACTGCGTCCCGCCGGGAACTTACGGC
                      ____________________________________________________________
consensus AGCAGGGCATGCAAGACATGCTGCCGAAGATGCAACTGCGTCCCGCCGGGAACTTACGGC
 
. : . : . : . : . : . :
JMFF039M09- AACAAGCATCTTTGCCCTTGCTATGCCCGCCTTAAGACTCATGGAAACAAGCTTAAGTGT
rJMFF039M09+ AACAAGCATCTTTGCCCTTGCTATGCCCGCCTTAAGACTCATGGAAACAAGCTTAAGTGT
                      ____________________________________________________________
consensus AACAAGCATCTTTGCCCTTGCTATGCCCGCCTTAAGACTCATGGAAACAAGCTTAAGTGT
 
. : . : . : . : . : . :
JMFF039M09- CCATGATTTGTCTTGACAAATAACAAACTATCAGGCTGGGGTGTGAGGGAGTTTAAGATG
rJMFF039M09+ CCATGATTTGTCTTGACAAATAACAAACTATCAGGCTGGGGTGTGAGGGAGTTTAAGATG
                      ____________________________________________________________
consensus CCATGATTTGTCTTGACAAATAACAAACTATCAGGCTGGGGTGTGAGGGAGTTTAAGATG
 
. : . : . : . : . : . :
JMFF039M09- GGCGATTCTACCTTTTGTCACAAGCATGTTATCAACCTAATAAGACGGATCGGATAATAT
rJMFF039M09+ GGCGATTCTACCTTTTGTCACAAGCATGTTATCAACCTAATAAGACGGATCGGATAATAT
                      ____________________________________________________________
consensus GGCGATTCTACCTTTTGTCACAAGCATGTTATCAACCTAATAAGACGGATCGGATAATAT
 
. : . : . : . : . : . :
JMFF039M09- ATTATTAACATGACAATGTAATAATTAAAAGAATAAATAGACTTCCATCATTCGTTATTG
rJMFF039M09+ ATTATTAACATGACAATGTAATAATTAAAAGAATAAATAGACTTCCATCATTCGTTATTG
                      ____________________________________________________________
consensus ATTATTAACATGACAATGTAATAATTAAAAGAATAAATAGACTTCCATCATTCGTTATTG
 
. : . : . : . : . : . :
JMFF039M09- TTGTCTAAAATTTAAAATACTTTTAAAACATTGCATTTTCCAATCTTGGTA
rJMFF039M09+ TTGTCTAAAATTTAAAATACTTTTAAAACATTGCATTTTCCAATCTTGGTAATAAAGGTA
                      ____________________________________________________________
consensus TTGTCTAAAATTTAAAATACTTTTAAAACATTGCATTTTCCAATCTTGGTAATAAAGGTA