Contig 009745:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036J13Sequence154009745 (3)ref|XP_008787030.1|5e-08PREDICTED: putative lysozyme-like protein [Phoenix dactylifera]683009745 (3)ref|XP_009773555.1|2e-25PREDICTED: putative DNA-binding protein ESCAROLA [Nicotiana sylvestris]
JMSF048N10Sequence325022257ref|XP_009773555.1|2e-05PREDICTED: putative DNA-binding protein ESCAROLA [Nicotiana sylvestris]760009745 (3)ref|XP_009773555.1|2e-55PREDICTED: putative DNA-binding protein ESCAROLA [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF048N10+                        GGAGAGGATGTGCAGGCAAAATTAATGTCGTTTTCTCAGAATACCT
                      ____________________________________________________________
consensus                           GGAGAGGATGTGCAGGCAAAATTAATGTCGTTTTCTCAGAATACCT
 
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JMFF036J13-                    TCTGTATTCTGTCAGCAAACGGTGCCATATCTAATGTAACACTTCGCCAAG
rJMSF048N10+          CGCAAGCCATCTGTATTCTGTCAGCAAACGGTGCCATATCTAATGTAACACTTCGCCAAG
                      ____________________________________________________________
consensus             CGCAAGCCATCTGTATTCTGTCAGCAAACGGTGCCATATCTAATGTAACACTTCGCCAAG
 
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JMFF036J13-           CAGCAACGTCTGGTGGGACTGTGACCTATGAG                            
rJMSF048N10+          CAGCAACGTCTGGTGGGACTGTGACCTATGAGGGACGATTCGAGATCCTGTCTCTATCGG
rJMFF036J13+                                        AGGGACGATTCGAGATCCTGTCTCTATCGG
                      ____________________________________________________________
consensus             CAGCAACGTCTGGTGGGACTGTGACCTATGAGGGACGATTCGAGATCCTGTCTCTATCGG
 
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rJMSF048N10+          GATCCTTTCTACTCTCGGAACTGGGTGGTCAGCGCAGCAGAACGGGTGGTTTGAGCGTGT
rJMFF036J13+          GATCCTTTNTACTCTCGGAACTGGGTGGTCAGCGCAGCAGAACGGGTGGTTTGAGCGTGT
                      ____________________________________________________________
consensus             GATCCTTTCTACTCTCGGAACTGGGTGGTCAGCGCAGCAGAACGGGTGGTTTGAGCGTGT
 
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rJMSF048N10+          CCCTAGCCGGACCAGATGGTCACGTTTTAGGCGGTTGCGTTGCAGGTCTTCTAACCGCTG
rJMFF036J13+          CCCTAGCCGGACCAGATGGTCACGTTTTAGGCGGTTGCGTTGCAAGTCTTCTAACCGCTG
                      ____________________________________________________________
consensus             CCCTAGCCGGACCAGATGGTCACGTTTTAGGCGGTTGCGTTGCAGGTCTTCTAACCGCTG
 
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rJMSF048N10+          CATCTCCCGTTCAGGTTATTGTTGGAAGTTTCAGCATTGAAGTTCATCAACAGCAAGCAG
rJMFF036J13+          CATCTCCCGTTCAGGTTATTGTTGGAAGTTTCAGCATTGAAGTTCATCAACAGCAAGCAG
                      ____________________________________________________________
consensus             CATCTCCCGTTCAGGTTATTGTTGGAAGTTTCAGCATTGAAGTTCATCAACAGCAAGCAG
 
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rJMSF048N10+          GCAATTGTGAAGGGCTAGCCAGTCCAGGCATGCTCATTTCAGGAGGAGCCGCCAAAAGCC
rJMFF036J13+          GCAATTGTGAAGGGCTAGCCAGTCCAGGCATGCTCATTTCAGGAGGAGCCGCCAAAAGCC
                      ____________________________________________________________
consensus             GCAATTGTGAAGGGCTAGCCAGTCCAGGCATGCTCATTTCAGGAGGAGCCGCCAAAAGCC
 
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rJMSF048N10+          CACCTTCGCTTGGAACCCTAAGCGCGTCCAGTGGTGGCGGCCCCGTCAGCCCTCATAACC
rJMFF036J13+          CACCTTCGCTCGGAACCCTAAGCGCATCCAGTGGTGGCGGCCCCGTCAGCCCTCATAACC
                      ____________________________________________________________
consensus             CACCTTCGCTTGGAACCCTAAGCGCGTCCAGTGGTGGCGGCCCCGTCAGCCCTCATAACC
 
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rJMSF048N10+          ACCACCTCGAAACTTCAAATAGCAGTCCGTCTGGAATCGCGAGCATCCAGTGGAGGTAGA
rJMFF036J13+          ACCACCTCGAAACTTCAAATAGCAGTCCGTCTGGAATCGCGAGCATCCAGTGGAGGTAGA
                      ____________________________________________________________
consensus             ACCACCTCGAAACTTCAAATAGCAGTCCGTCTGGAATCGCGAGCATCCAGTGGAGGTAGA
 
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rJMSF048N10+          ACAACTCAAAATGTAACTGGGGATCGCCCCCCGGNCCCGCCCTCCACCCCACCCCCTCCT
rJMFF036J13+          ACAACTCAAAATGTAACTCGGGATCGCCCCCCGGCCCCGCCCTCCACCCCACCCCCTCCT
                      ____________________________________________________________
consensus             ACAACTCAAAATGTAACTGGGGATCGCCCCCCGGCCCCGCCCTCCACCCCACCCCCTCCT
 
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rJMSF048N10+          AACTCTGTTCTAGGAAAACCTNTCATCNTAATTCTCTAGGAACCTTAGCAATCTAGTTTA
rJMFF036J13+          AACTCTGTTCTAGGAAAACCTGTCATCATAATTCTCTAGGAACCTTAGCAATCTAGTTTA
                      ____________________________________________________________
consensus             AACTCTGTTCTAGGAAAACCTGTCATCATAATTCTCTAGGAACCTTAGCAATCTAGTTTA
 
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rJMSF048N10+          TTATGTAGTATGTAGGACTCAGCTTNNTGTGTGTGTGTAATGAATGTGTGCAATTTAGGT
rJMFF036J13+          TTATGTAGTATGTAGGACTCAGCTTTGTGTGTGTGTGTAATGAA-GTGTGCAATTTAGGT
                      ____________________________________________________________
consensus             TTATGTAGTATGTAGGACTCAGCTTTGTGTGTGTGTGTAATGAATGTGTGCAATTTAGGT
 
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rJMSF048N10+          TAAGTGACACCTTACAAC                                          
rJMFF036J13+          TAAGTGACACCTTACAACTGCCTGTGTGATTTGCATTTTACAATGTCAAACCACTTATAT
                      ____________________________________________________________
consensus             TAAGTGACACCTTACAACTGCCTGTGTGATTTGCATTTTACAATGTCAAACCACTTATAT