| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003F23 | Sequence | 504 | 005983 (9) | emb|CAN61013.1| | 6e-57 | hypothetical protein VITISV_036738 [Vitis vinifera] | 653 | 009744 (4) | ref|XP_006341228.1| | 9e-82 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
| JMFF036H12 | Sequence | 577 | 005983 (9) | emb|CAN61013.1| | 1e-56 | hypothetical protein VITISV_036738 [Vitis vinifera] | 705 | 009744 (4) | ref|XP_006341228.1| | 1e-95 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
| JMSF026G15 | Sequence | 655 | 005983 (9) | ref|XP_009801420.1| | 2e-91 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Nicotiana sylvestris] | 731 | 009744 (4) | ref|XP_010093782.1| | 4e-103 | Lysosomal Pro-X carboxypeptidase [Morus notabilis] gb|EXB54615.1| Lysosomal Pro- |
| JMSF049E08 | Sequence | 700 | 005983 (9) | ref|XP_009801420.1| | 5e-104 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Nicotiana sylvestris] | 724 | 009744 (4) | ref|XP_010093782.1| | 7e-103 | Lysosomal Pro-X carboxypeptidase [Morus notabilis] gb|EXB54615.1| Lysosomal Pro- |
This contig is upended
. : . : . : . : . : . :
rJMFF036H12+ CGTCAAACAGATGTGTAAAGCAATTGATGATCCAAATCATGGGAG
____________________________________________________________
consensus CGTCAAACAGATGTGTAAAGCAATTGATGATCCAAATCATGGGAG
. : . : . : . : . : . :
rJMFF003F23+ CTGGGGAAGT
rJMFF036H12+ CGACCCATTGGCGAAACTGTATAGTGCAGTTAACATATACTACAACTACNCTGGGGAAGT
____________________________________________________________
consensus CGACCCATTGGCGAAACTGTATAGTGCAGTTAACATATACTACAACTACNCTGGGGAAGT
. : . : . : . : . : . :
rJMFF003F23+ CAACAACTGTTTCGATCTCGCAAGTTNTTNTGATCCACATGGTCTTAGTGGGTGGTCCTG
rJMFF036H12+ CAACAACTGTTTCGATCTCGCAAGTTNTTTTGATCCNCATGGTCTTAGTGGGTGGTCCTG
____________________________________________________________
consensus CAACAACTGTTTCGATCTCGCAAGTTNTTTTGATCCACATGGTCTTAGTGGGTGGTCCTG
. : . : . : . : . : . :
rJMSF026G15+ TTGTACGGAGATGATAATGCCNTTAGGTGGTAGCNATAAGGATAGCNTTTTTCC
rJMSF049E08+ TTGTACGGAGATGATAATGCCNTTAGGTGGTAGCNATAAGGATAGCNTTTTTCC
rJMFF003F23+ GCAGGCTTGTACGGAGATGATAATGCCATTAGGTGGTAGCAATAAGGATAGCATTTTTCC
rJMFF036H12+ GCAGGCTTGTACGGAGATGATAATGCCATTAGGTGGTAGCAATAAGGATAGCATTTTTCC
____________________________________________________________
consensus GCAGGCTTGTACGGAGATGATAATGCCATTAGGTGGTAGCAATAAGGATAGCATTTTTCC
. : . : . : . : . : . :
rJMSF026G15+ AGCTTCGGAATGGGACTATAATGAAAGGGCCCAATATTGTAAAGAAGCCTTCAAAATCGA
rJMSF049E08+ AGCTTCGGAATGGGACTATAATGAAAGGGCCCAATATTGTAAAGAAGCCTTCAAAATCGA
rJMFF003F23+ AGCTTCGGAATGGGACTATAATGAAAGGGCCCAATATTGTAAAGAAGCCTTCAAAATCGA
rJMFF036H12+ AGCTTCGGAATGGGACTATAATGAAAGGGCCCAATATTGTAAAGAAGCCTTCAAAATCGA
____________________________________________________________
consensus AGCTTCGGAATGGGACTATAATGAAAGGGCCCAATATTGTAAAGAAGCCTTCAAAATCGA
. : . : . : . : . : . :
rJMSF026G15+ GCCCCGGCCCAATTGGATTACCNCGGAGTTCGGGGGCCNCAACNTTGAGAGGGTTTTAAA
rJMSF049E08+ GCCCCGGCCCAATTGGATTACCNCGGAGTTCGGGGGCCNCAACNTTGAGAGGGTTTTAAA
rJMFF003F23+ GCCCCGGCCCAATTGGATTACCACGGAGTTCGGGGGCCACAACATTGAGAGGGTTTTAAA
rJMFF036H12+ GCCCCGGCCCAATTGGATTACCNCGGAGTTCGGGGGCCACAACATTGAGAGGGTTTTAAA
____________________________________________________________
consensus GCCCCGGCCCAATTGGATTACCACGGAGTTCGGGGGCCACAACATTGAGAGGGTTTTAAA
. : . : . : . : . : . :
rJMSF026G15+ AAGGTTTGGTAGCAACATCATCTTCTTTAACGGATTGAGGGATCCNTGGAGTGCGGGAGG
rJMSF049E08+ AAGGTTTGGTAGCAACATCATCTTCTTTAACGGATTGAGGGATCCNTGGAGTGCGGGAGG
rJMFF003F23+ AAGGTTTGGTAGCAACATCATNTTCTTTAACGGATTGAGGGATCCATGGAGTGCGGGAGG
rJMFF036H12+ AAGGTTTGGTAGCAACATCATNTTNTTTAACGGATTGAGGGATCCATGGAGTGCGGGAGG
____________________________________________________________
consensus AAGGTTTGGTAGCAACATCATCTTCTTTAACGGATTGAGGGATCCATGGAGTGCGGGAGG
. : . : . : . : . : . :
rJMSF026G15+ GGTGCTAAAAAATATCTCTAAATCTTTAGTTGCTATCNTTGCAAAAGAAGGTGCGCATCA
rJMSF049E08+ GGTGCTAAAAAATATCTCTAAATCTTTAGTTGCTATCNTTGCAAAAGAAGGTGCGCATCA
rJMFF003F23+ GGTGCTAAAAAATATCTNTAAATCTTTAGTTGCTATCATTGCAAAAGAAGGTGCGCATCA
rJMFF036H12+ GGTGCTAAAAAATATCTNTAAATCTTTAGTTGCTATCATTGCAAAAGAAGGTGCGCATCA
____________________________________________________________
consensus GGTGCTAAAAAATATCTCTAAATCTTTAGTTGCTATCATTGCAAAAGAAGGTGCGCATCA
. : . : . : . : . : . :
rJMSF026G15+ TGTGGACCTTAGATTCTCAACAAAGGAAGATCCAAAATGGCTAAAAGATGTGAGGAGGAA
rJMSF049E08+ TGTGGACCTTAGATTCTCAACAAAGGAAGATCCAAAATGGCTAAAAGATGTGAGGAGGAA
rJMFF003F23+ TGTGGACCTTAGATTNTCAACAAAGGAAGATCCAAAATGGCTAAAAGATGTGAGGAGGAA
rJMFF036H12+ TGTGGACCTTAGATTNTCAACAAAGGAAGATCCAAAATGGCTAAAAGATGTGAGGAGGAA
____________________________________________________________
consensus TGTGGACCTTAGATTCTCAACAAAGGAAGATCCAAAATGGCTAAAAGATGTGAGGAGGAA
. : . : . : . : . : . :
rJMSF026G15+ GGAGGTTGAAATCATACNGAAATGGATTTCTCAATATTATCAT
rJMSF049E08+ GGAGGTTGAAATCATACNGAAATGGATTTCTCAATATTATCATAGTTTAACNGATTTAAT
rJMFF003F23+ GGAGGTTGAAATCATACAGAAATGGATTTCTCAATATTATCAT
rJMFF036H12+ GGAGGTTGAAATCATACAGAAATGGATTTNTCAATATTATCATAGTTTAACAGATTTAAT
____________________________________________________________
consensus GGAGGTTGAAATCATACAGAAATGGATTTCTCAATATTATCATAGTTTAACAGATTTAAT
. : . : . : . : . : . :
rJMSF049E08+ TTAGAATTTTGATTGTTTAAA-TTTTTTTTTTGGGGGTTACGTAGAAACTCACAATAACT
rJMFF036H12+ TTAGAATTTTGATTGTTTAAATTTTTTTTTTTGGGGGTTACGTAGAAACTCACAATAACT
____________________________________________________________
consensus TTAGAATTTTGATTGTTTAAATTTTTTTTTTTGGGGGTTACGTAGAAACTCACAATAACT
. : . : . : . : . : . :
rJMSF049E08+ ATTCAAGATGTACACAAGTTGAACATTGCTCTTATGTAATATCCAACAATATAAT
rJMFF036H12+ ATTCAAGATGTACACAAGTTGAACATTGCTCTTATGTAATATCCAACAATATAATTACAC
____________________________________________________________
consensus ATTCAAGATGTACACAAGTTGAACATTGCTCTTATGTAATATCCAACAATATAATTACAC