Contig 009743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP015A02Sequence586009743 (6)ref|XP_009773188.1|5e-72PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris]
JMFF030P14Sequence433009743 (6)ref|XP_009773188.1|1e-41PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris]715009743 (6)ref|XP_009773188.1|5e-85PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris]
JMFF036F24Sequence535009743 (6)ref|XP_009773188.1|7e-62PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris]667009743 (6)ref|XP_009588605.1|1e-77PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana tomentosiformis]
JMFF037G01Sequence716009743 (6)ref|XP_009773188.1|6e-85PREDICTED: fasciclin-like arabinogalactan protein 9 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF036F24- ACCATCACCGC
JMFF030P14- ACCATCACCGC
rJMCP015A02- ACCATCACCGC
                      ____________________________________________________________
consensus ACCATCACCGC
 
. : . : . : . : . : . :
JMFF036F24- CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
JMFF030P14- CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
rJMCP015A02- CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
                      ____________________________________________________________
consensus CGCCGCCACCGCGACCATCACCGCCGCCATTACCGCCGCCGGCACTCTCTAGTATAGGCC
 
. : . : . : . : . : . :
JMFF036F24- AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
JMFF030P14- AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
rJMCP015A02- AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
                      ____________________________________________________________
consensus AAGAATGGCTAAAGCTGCTGTTTCTTTCATTGTTCTATCATTTTTGTTGGTGGGGTTGGC
 
. : . : . : . : . : . :
JMFF036F24- TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
JMFF030P14- TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
rJMCP015A02- TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
                      ____________________________________________________________
consensus TGAGGTGAAAGCCCAAGCTCCGGCGCCGTCCCCCGGCGGGCCAGTGGACATCTTCGCCGT
 
. : . : . : . : . : . :
JMFF036F24- GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
JMFF030P14- GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMCP015A02- GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMFF030P14+ TGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMFF037G01+ TGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
rJMFF036F24+ CCCAAGT
                      ____________________________________________________________
consensus GTTGAAAAAGGCCGGCGGGCAATTTGGCATCTTCATCAAGTTCCTGAACACTACCCAAGT
 
. : . : . : . : . : . :
JMFF036F24- GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
JMFF030P14- GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMCP015A02- GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMFF030P14+ GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMFF037G01+ GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
rJMFF036F24+ GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
                      ____________________________________________________________
consensus GGGGAACCAGGTCAACATCCAAGTCAACAGCCCCACTGATGGGATGACTGTGTTTGCCCC
 
. : . : . : . : . : . :
JMFF036F24- CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
JMFF030P14- CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMCP015A02- CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMFF030P14+ CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMFF037G01+ CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
rJMFF036F24+ CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
                      ____________________________________________________________
consensus CACTGATAATGCCTTCAACAATCTCCCTTCCGGCACCCTCAACAAGCTCTCCGACCAGCA
 
. : . : . : . : . : . :
JMFF036F24- GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
JMFF030P14- GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMCP015A02- GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMFF030P14+ GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMFF037G01+ GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
rJMFF036F24+ GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
                      ____________________________________________________________
consensus GAAAATCTTGCTCATTCAGTACCATGTTATCCCTAAATTCTACTCCTTTGAAGATCTTCA
 
. : . : . : . : . : . :
JMFF036F24- GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
JMFF030P14- GA
rJMCP015A02- GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
rJMFF030P14+ GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
rJMFF037G01+ GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
rJMFF036F24+ GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
                      ____________________________________________________________
consensus GACCGTCAGCAACCCCGTCAGAACTCAGGCTAACGGGCCAGATGGAAAGACATACGGGCT
 
. : . : . : . : . : . :
JMFF036F24- GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGG
rJMCP015A02- GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
rJMFF030P14+ GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
rJMFF037G01+ GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
rJMFF036F24+ GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
                      ____________________________________________________________
consensus GAACTTCACCGGCCAGAACAACCAAGTGAACGTGTCTTCCGGGGCGGTGGAGACTCAAGT
 
. : . : . : . : . : . :
rJMCP015A02- TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTG
rJMFF030P14+ TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
rJMFF037G01+ TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
rJMFF036F24+ TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
                      ____________________________________________________________
consensus TTATAACCCTTTGAGAAAAGACCCTCCGTTGGCTGTTTATCATGTTGATAAGGTTTTGGT
 
. : . : . : . : . : . :
rJMFF030P14+ GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
rJMFF037G01+ GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
rJMFF036F24+ GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
                      ____________________________________________________________
consensus GCCGCTGGACTTCACTGCCGATCATCCGGCGGCGAAGGCTCCCACCGGATCCGCCTCATC
 
. : . : . : . : . : . :
rJMFF030P14+ TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
rJMFF037G01+ TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
rJMFF036F24+ TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
                      ____________________________________________________________
consensus TACGCCTGCCGGCAAGAGCAACGACGGGAAGAATGCGACGGCAGCCAAAGAGCCGTCTCC
 
. : . : . : . : . : . :
rJMFF030P14+ TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
rJMFF037G01+ TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
rJMFF036F24+ TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
                      ____________________________________________________________
consensus TGCTCCAAACGGTGCCGGAAAGATGAGCTTGGAGCTGGGTTTGGTTACTGGAATCTTGGT
 
. : . : . : . : . : . :
rJMFF030P14+ GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
rJMFF037G01+ GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
rJMFF036F24+ GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
                      ____________________________________________________________
consensus GTTTTGTATGGGATTGCTTTCTTGAGGAGATAAGATGGATATGCATGTACGTTATTGATT
 
. : . : . : . : . : . :
rJMFF030P14+ ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTA
rJMFF037G01+ ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTA
rJMFF036F24+ ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTATCT
                      ____________________________________________________________
consensus ATTCTGTATGTTTGTTCTTGTAGAACATTATTTAATTTCATCATTGTTTTCTTTTTATCT