| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005E24 | Sequence | 414 | 009727 (6) | ref|XP_004232700.1| | 80.5 | PREDICTED: uncharacterized protein LOC101249700 [Solanum lycopersicum] ref|XP_01 | 720 | 009727 (6) | ref|XP_006348133.1| | 1e-112 | PREDICTED: uncharacterized protein LOC102601382 isoform X2 [Solanum tuberosum] |
| JMFF033C11 | Sequence | 537 | 009727 (6) | ref|XP_004232700.1| | 156 | PREDICTED: uncharacterized protein LOC101249700 [Solanum lycopersicum] ref|XP_01 | 777 | 009727 (6) | ref|XP_006348133.1| | 1e-105 | PREDICTED: uncharacterized protein LOC102601382 isoform X2 [Solanum tuberosum] |
| JMFF033C12 | Sequence | 540 | 000004 (10) | 637 | 009727 (6) | ref|XP_009782827.1| | 212 | PREDICTED: uncharacterized protein LOC104231512 [Nicotiana sylvestris] | |||
| JMFS047D08 | Sequence | 628 | 009727 (6) | ref|XP_004232700.1| | 258 | PREDICTED: uncharacterized protein LOC101249700 [Solanum lycopersicum] ref|XP_01 | |||||
This contig is upended
. : . : . : . : . : . :
JMFF005E24- ATATCACTGTATCTATA
JMFF033C11- GTATATCACTGTATCTATA
____________________________________________________________
consensus GTATATCACTGTATCTATA
. : . : . : . : . : . :
JMFF005E24- TCTCTGTCGTTCATCATCTTCTTAATTCTGATTGAATTGTATTGCCTCTGAGCTATTCTG
JMFF033C11- TCTCTGTCGTTCATCATCTTCTTAATTCTGATTGAATTGTATTGCCTCTGAGCTATTCTG
JMFS047D08- CTG
____________________________________________________________
consensus TCTCTGTCGTTCATCATCTTCTTAATTCTGATTGAATTGTATTGCCTCTGAGCTATTCTG
. : . : . : . : . : . :
JMFF005E24- AATCGCATCGCTTCTGGTAAACGGTGAGCGGATCATGGTCCAACCATGCTAATTGTTCAG
JMFF033C11- AATCGCATCGCTTCTGGTAAACGGTGAGCGGATCATGGTCCAACCATGCTAATTGTTCAG
JMFS047D08- AATCGCATCGCTTCTGGTAAACGGTGAGCGGATCATGGTCCAACCATGCTAATTGTTCAG
____________________________________________________________
consensus AATCGCATCGCTTCTGGTAAACGGTGAGCGGATCATGGTCCAACCATGCTAATTGTTCAG
. : . : . : . : . : . :
JMFF005E24- ATTCCACGAGCCTCGAGTCATCAAACGACTTGGGATGTCAATGTGCTGCGTGAGACGTCT
JMFF033C11- ATTCCACGAGCCTCGAGTCATCAAACGACTTGGGATGTCAATGTGCTGCGTGAGACGTCT
JMFS047D08- ATTCCACGAGCCTCGAGTCATCAAACGACTTGGGATGTCAATGTGCTGCGTGAGACGTCT
____________________________________________________________
consensus ATTCCACGAGCCTCGAGTCATCAAACGACTTGGGATGTCAATGTGCTGCGTGAGACGTCT
. : . : . : . : . : . :
JMFF005E24- CCCTGCAAGTCAAAACGTGTTAATCCACTGATTAGTACTCACGGTTTTTCGAGCCTCCAC
JMFF033C11- CCCTGCAAGTCAAAACGTGTTAATCCACTGATTAGTACTCACGGTTTTTCGAGCCTCCAC
JMFS047D08- CCCTGCAAGTCAAAACGTGTTAATCCACTGATTAGTACTCACGGTTTTTCGAGCCTCCAC
____________________________________________________________
consensus CCCTGCAAGTCAAAACGTGTTAATCCACTGATTAGTACTCACGGTTTTTCGAGCCTCCAC
. : . : . : . : . : . :
JMFF005E24- TGTGGTCCCAATAACGGGGCTCGCAGTTGCCCTTTCTCGCTGAACTATGCTAATAAGTTC
JMFF033C11- TGTGGTCCCAATAACGGGGCTCGCAGTTGCCCTTTCTCGCTGAACTATGCTAATAAGTTC
JMFS047D08- TGTGGTCCCAATAACGGGGCTCGCAGTTGCCCTTTCTCGCTGAACTATGCTAATAAGTTC
____________________________________________________________
consensus TGTGGTCCCAATAACGGGGCTCGCAGTTGCCCTTTCTCGCTGAACTATGCTAATAAGTTC
. : . : . : . : . : . :
JMFF005E24- AAGCCTCTCTTCTATCTCTCGCAAAATTCCACTTTGAGGACATGGCTGTGTCATTCGCAA
JMFF033C11- AAGCCTCTCTTCTATCTCTCGCAAAATTCCACTTTGAGGACATGGCTGTGTCATTCGCAA
JMFS047D08- AAGCCTCTCTTCTATCTCTCGCAAAATTCCACTTTGAGGACATGGCTGTGTCATTCGCAA
____________________________________________________________
consensus AAGCCTCTCTTCTATCTCTCGCAAAATTCCACTTTGAGGACATGGCTGTGTCATTCGCAA
. : . : . : . : . : . :
JMFF005E24- GATGCTATATCGCCTGAGAACGAGTATCGATCCTCGA
JMFF033C11- GATGCTATATCGCCTGAGAACGAGTATCGATCCTCGAGGAACATAGCTATCAGCCTGCTC
JMFS047D08- GATGCTATATCGCCTGAGAACGAGTATCGATCCTCGAGGAACATAGCTATCAGCCTGCTC
rJMFF005E24+ TCGAGGAACATAGCTATCAGCCTGCTC
rJMFF033C11+ TGCTC
____________________________________________________________
consensus GATGCTATATCGCCTGAGAACGAGTATCGATCCTCGAGGAACATAGCTATCAGCCTGCTC
. : . : . : . : . : . :
JMFF033C11- AAACGATACAAGTATTTTGCTGAGCGTGGAGGAGGTGACAATCTAAAAGAGTTCATCAGT
JMFS047D08- AAACGATACAAGTATTTTGCTGAGCGTGGAGGAGGTGACAATCTAAAAGAGTTCATCAGT
rJMFF005E24+ AAACGATACAAGTATTTTGCTGAGCGTGGAGGAGGTGACAATCTAAAAGAGTTCATCAGT
rJMFF033C11+ AAACGATACAAGTATTTTGCTGAGCGTGGAGGAGGTGACAATNTAAAAGAGTTCATCAGT
____________________________________________________________
consensus AAACGATACAAGTATTTTGCTGAGCGTGGAGGAGGTGACAATCTAAAAGAGTTCATCAGT
. : . : . : . : . : . :
JMFF033C11- GCGGGAGTAAATGCATATGCACTGGGATGTACGGATGA
JMFS047D08- GCGGGAGTAAATGCATATGCACTGGGATGTACGGATGAAGGTTTAAGGAAAGAACTTACT
rJMFF005E24+ GCGGGAGTAAATGCATATGCACTGGGATGTACGGATGAAGGTTTAAGGAAAGAACTTACT
rJMFF033C11+ GCGGGAGTAAATGCATATGCACTGGGATGTACGGATGAAGGTTTAAGGAAAGAACTTACT
____________________________________________________________
consensus GCGGGAGTAAATGCATATGCACTGGGATGTACGGATGAAGGTTTAAGGAAAGAACTTACT
. : . : . : . : . : . :
JMFS047D08- GCTCTGAAGGAATCTGGGGTCGAGATTGAAGCAATGCAAACGTACGGTGGAAGTA-CGAG
rJMFF005E24+ GCTCTGAAGGAATCTGGGGTCGAGATTGAAGCAATGCAAACGTACGGTGGAAGTA-CGAG
rJMFF033C11+ GCTCTGAAGGAATCTGGGGTCGAGATTGAAGCAATGCAAACGTACGGTGGAAGTA-CGAG
rJMFF033C12+ GATTGAAGCAATGCAAACGTACGGTGGAAGTANCGAG
____________________________________________________________
consensus GCTCTGAAGGAATCTGGGGTCGAGATTGAAGCAATGCAAACGTACGGTGGAAGTA-CGAG
. : . : . : . : . : . :
JMFS047D08- TCTGAAGTCCAAAATTTTCTCGAGTGAGGTTGACGAGTGTATTTTGTGGTTGAGCATCAT
rJMFF005E24+ TCTGAAGTCCAAAATTTTCTCGAGTGAGGTTGACGAGTGTATTTTGTGGTTGAGCATCAT
rJMFF033C11+ TCTGAAGTCCAAAATTTTCTCGAGTGAGGTTGACGAGTGTATTTTGTGGTTGAGCATCAT
rJMFF033C12+ TCTGAAGTCCAAAATTTTCTCGAGTGAGGTTGACGAGTGTATTTTGTGGTTGAGCATCAT
____________________________________________________________
consensus TCTGAAGTCCAAAATTTTCTCGAGTGAGGTTGACGAGTGTATTTTGTGGTTGAGCATCAT
. : . : . : . : . : . :
JMFS047D08- ATTCATCACGATATTGTGTACGCCAC
rJMFF005E24+ ATTCATCACGATATTGTGTACGCCACAACCGACCATAGTTCGATGGTCGTCCACTCCTCC
rJMFF033C11+ ATTCATCACGATATTGTGTACGCCACAACCGACCATAGTTCGATGGTCGTCCACTCCTCC
rJMFF033C12+ ATTCATCACGATATTGTGTACGCCACAACCGACCATAGTTCGATGGTCGTCCACTCCTCC
____________________________________________________________
consensus ATTCATCACGATATTGTGTACGCCACAACCGACCATAGTTCGATGGTCGTCCACTCCTCC
. : . : . : . : . : . :
rJMFF005E24+ TGTTTCGGATGAAATGATGGTGCAGTGGAAAGGGTTTTGTGCAATTATAGCTAATGCATA
rJMFF033C11+ TGTTTCGGATGAAATGATGGTGCAGTGGAAAGGGTTTTGTGCAATTATAGCTAATGCATA
rJMFF033C12+ TGTTTCGGATGAAATGATGGTGCAGTGGAAAGGGTTTTGTGCAATTATAGCTAATGCATA
____________________________________________________________
consensus TGTTTCGGATGAAATGATGGTGCAGTGGAAAGGGTTTTGTGCAATTATAGCTAATGCATA
. : . : . : . : . : . :
rJMFF005E24+ TTTCATGAGAGGAATGGCGTGGCTTCCGGTTAAAACGCTTCAGCTAGAGCAAATGGCAGT
rJMFF033C11+ TTTCATGAGAGGAATGGCGTGGCTTCCGGTTAAAACGCTTCAGCTAGAGCAAATGGCAGT
rJMFF033C12+ TTTCATGAGAGGAATGGCGTGGCTTCCGGTTAAAACGCTTCAGCTAGAGCAAATGGCAGT
____________________________________________________________
consensus TTTCATGAGAGGAATGGCGTGGCTTCCGGTTAAAACGCTTCAGCTAGAGCAAATGGCAGT
. : . : . : . : . : . :
rJMFF005E24+ TGTGGGACAAGCCGAAGAGGCCTCAGTGGTGGCGAGCCGGATGAGACTGGTGTTTAGTAC
rJMFF033C11+ TGTGGGACAAGCCGAAGAGGCCTCAGTGGTGGCGAGCCGGATGAGACTGGTGTTTAGTAC
rJMFF033C12+ TGTGGGACAAGCCGAAGAGGCCTCAGTGGTGGCGAGCCGGATGAGACTGGTGTTTAGTAC
____________________________________________________________
consensus TGTGGGACAAGCCGAAGAGGCCTCAGTGGTGGCGAGCCGGATGAGACTGGTGTTTAGTAC
. : . : . : . : . : . :
rJMFF005E24+ ACTCGAGGTTGTGAGTCCACAATGGCCAAAAGTCTGACACAAGAAACTACACATAAAATA
rJMFF033C11+ ACTCGAGGTTGTGAGTCCACAATGGCCAAAAGTCTGACACAAGAAACTACACATAAAATA
rJMFF033C12+ ACTCGAGGTTGTGAGTCCACAATGGCCAAAAGTCTGACACAAGAAACTACACATAAAATA
____________________________________________________________
consensus ACTCGAGGTTGTGAGTCCACAATGGCCAAAAGTCTGACACAAGAAACTACACATAAAATA
. : . : . : . : . : . :
rJMFF005E24+ GAGGTTACCTGATTTGTATGGAGAAGCAGGAGATGTATTCATTTCATTACTAAGTGGAAA
rJMFF033C11+ GAGGTTACCTGATTTGTATGGAGAAGCAGGAGATGTATTCATTTCATTACTAAGTGGAAA
rJMFF033C12+ GAGGTTACCTGATTTGTATGGAGAAGCAGGAGATGTATTCATTTCATTACTAAGTGGAAA
____________________________________________________________
consensus GAGGTTACCTGATTTGTATGGAGAAGCAGGAGATGTATTCATTTCATTACTAAGTGGAAA
. : . : . : . : . : . :
rJMFF005E24+ TCATTTGTGAAAACTGTCCGTATTATGTAGTACAGGTGAACCAAAAGATTACATGAGTTT
rJMFF033C11+ TCATTTGTGAAAACTGTCCGTATTATGTAGTACAGGTGAACCAAAAGATTACATGAGTTT
rJMFF033C12+ TCATTTGTGAAAACTGTCCGTATTATGTAGTACAGGTGAACCAAAAGATTACATGAGTTT
____________________________________________________________
consensus TCATTTGTGAAAACTGTCCGTATTATGTAGTACAGGTGAACCAAAAGATTACATGAGTTT
. : . : . : . : . : . :
rJMFF005E24+ CATTTCTACCCTTCACTTTGAGACCTTTGAGTGT
rJMFF033C11+ CATTTCTACCCTTCACTTTGAGACCTTTGAGTGTACTTTTCTGTAATTTTAGAAAATATC
rJMFF033C12+ CATTTCTACCCTTCACTTTGAGACCTTTGAGTGTACTTTTCTGTAATTTTAGAAAATATC
____________________________________________________________
consensus CATTTCTACCCTTCACTTTGAGACCTTTGAGTGTACTTTTCTGTAATTTTAGAAAATATC
. : . : . : . : . : . :
rJMFF033C11+ CATAAGTTCCGGCAAGATATAGTTCAACTGGTCAACTAAATTAAAATAAGTTT
rJMFF033C12+ CATAAGTTCCGGCAAGATATAGTTCAACTGGTCAACTAAATTAAAATAAGTTTATAAACT
____________________________________________________________
consensus CATAAGTTCCGGCAAGATATAGTTCAACTGGTCAACTAAATTAAAATAAGTTTATAAACT