| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018C14 | Sequence | 519 | 009725 (11) | ref|XP_006338961.1| | 4e-44 | PREDICTED: uncharacterized protein LOC102600963 isoform X1 [Solanum tuberosum] | 736 | 009725 (11) | ref|XP_004249637.1| | 5e-69 | PREDICTED: prosaposin [Solanum lycopersicum] |
| JMFF025I04 | Sequence | 600 | 009725 (11) | ref|XP_009590658.1| | 1e-52 | PREDICTED: prosaposin-like isoform X2 [Nicotiana tomentosiformis] | 792 | 009725 (11) | ref|XP_006338961.1| | 6e-74 | PREDICTED: uncharacterized protein LOC102600963 isoform X1 [Solanum tuberosum] |
| JMFF031P24 | Sequence | 622 | 009725 (11) | ref|XP_006338961.1| | 1e-61 | PREDICTED: uncharacterized protein LOC102600963 isoform X1 [Solanum tuberosum] | 772 | 009725 (11) | ref|XP_004249637.1| | 8e-72 | PREDICTED: prosaposin [Solanum lycopersicum] |
| JMFF032O11 | Sequence | 192 | 000573 (73) | pdb|1ZEQ|X | 9e-06 | Chain X, 1.5 A Structure Of Apo-Cusf Residues 6-88 From Escherichia Coli | 205 | 009725 (11) | |||
| JMFF032O12 | Sequence | 547 | 009725 (11) | ref|XP_009774594.1| | 1e-50 | PREDICTED: prosaposin-like [Nicotiana sylvestris] | |||||
| JMFN009L05 | Sequence | 626 | 009725 (11) | ref|XP_006338961.1| | 2e-66 | PREDICTED: uncharacterized protein LOC102600963 isoform X1 [Solanum tuberosum] | |||||
| JMSF013D08 | Sequence | 497 | 009725 (11) | ref|XP_006338961.1| | 4e-38 | PREDICTED: uncharacterized protein LOC102600963 isoform X1 [Solanum tuberosum] | 777 | 009725 (11) | ref|XP_004249637.1| | 1e-71 | PREDICTED: prosaposin [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF013D08- GGCTAATTT
JMFN009L05- CTTTGTGGCTAATTT
____________________________________________________________
consensus CTTTGTGGCTAATTT
. : . : . : . : . : . :
JMSF013D08- CTCTCACTCTCTGAAGCATGGATAGAAGGCTTTGTTTCGTTCTTCTTGTACTTGCTATTA
JMFN009L05- CTCTCACTCTCTGAAGCATGGATAGAAGGCTTTGTTTCGTTCTTCTTGTACTTGCTATTA
JMFF018C14- A
JMFF031P24- A
JMFF025I04- A
rJMFF025I04+ GTACTTGCTATTA
____________________________________________________________
consensus CTCTCACTCTCTGAAGCATGGATAGAAGGCTTTGTTTCGTTCTTCTTGTACTTGCTATTA
. : . : . : . : . : . :
JMSF013D08- GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
JMFN009L05- GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
rJMSF013D08+ AGAGAGAATCCTTAGATG
rJMFF031P24+ G
JMFF018C14- GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
JMFF031P24- GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
JMFF025I04- GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
rJMFF025I04+ GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
____________________________________________________________
consensus GCTGGTGCTGTAGTGCAAAAGATTTAGCAACTGCTGACCTTAAGAGAGAATCCTTAGATG
. : . : . : . : . : . :
JMSF013D08- TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
JMFN009L05- TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
rJMSF013D08+ TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
rJMFF031P24+ TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
JMFF018C14- TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
JMFF031P24- TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
rJMFF018C14+ GGAATGAACAAGTGTGCTTAT
JMFF025I04- TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
rJMFF025I04+ TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
____________________________________________________________
consensus TCTCAGAGAAAGAAGTTCAAGCCACAAAACTAGTCAGCAGGAATGAACAAGTGTGCTTAT
. : . : . : . : . : . :
JMSF013D08- TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
JMFN009L05- TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
rJMSF013D08+ TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
rJMFF031P24+ TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
JMFF018C14- TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
JMFF031P24- TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
rJMFF018C14+ TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
JMFF025I04- TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
rJMFF025I04+ TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
____________________________________________________________
consensus TGTGTGAACAATATGCATCTGAGGCACTCGCTTACCTTTCTAATGAGCAGAACCAAAGAG
. : . : . : . : . : . :
JMSF013D08- AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
JMFN009L05- AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
rJMSF013D08+ AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
rJMFF031P24+ AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
JMFF018C14- AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
JMFF031P24- AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
rJMFF018C14+ AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
rJMFF032O12+ TCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGNG
JMFF025I04- AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
rJMFF025I04+ AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
____________________________________________________________
consensus AGATAACTGAGTTCCTTCTCAAGACCTGCTATAAGTTGCCTGTGTACAAGCAAGAGTGCG
. : . : . : . : . : . :
JMSF013D08- TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
JMFN009L05- TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
rJMSF013D08+ TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
rJMFF031P24+ TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
JMFF018C14- TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
JMFF031P24- TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
rJMFF018C14+ TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
rJMFF032O12+ TTGGATTGGTGAATCAATATGCTACTNTTTTCTTCTTAGAGATNTCCTCCTTACAGCCTG
JMFF025I04- TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
rJMFF025I04+ TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
____________________________________________________________
consensus TTGGATTGGTGAATCAATATGCTACTCTTTTCTTCTTAGAGATCTCCTCCTTACAGCCTG
. : . : . : . : . : . :
JMSF013D08- AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
JMFN009L05- AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
rJMSF013D08+ AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
rJMFF031P24+ AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
JMFF018C14- AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
JMFF031P24- AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
rJMFF018C14+ AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
rJMFF032O12+ AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
JMFF025I04- AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
rJMFF025I04+ AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
____________________________________________________________
consensus AAAACTTGTGCCAAGAGATTGACCTCTGTGAAAAAGTTGTTTCCATTTCTCAATATGTAT
. : . : . : . : . : . :
JMSF013D08- CCNATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
JMFN009L05- CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
rJMSF013D08+ CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
rJMFF031P24+ CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
JMFF018C14- CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
JMFF031P24- CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
rJMFF018C14+ CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
rJMFF032O12+ CCAATAGTAGNTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
JMFF025I04- CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
rJMFF025I04+ CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
____________________________________________________________
consensus CCAATAGTAGCTGTGATTTATGCCATCGTGCTGTTATGGAGGCCATACAGCAGTTGAAAA
. : . : . : . : . : . :
JMSF013D08- ATCCAGA
JMFN009L05- ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
rJMSF013D08+ ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
rJMFF031P24+ ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
JMFF018C14- ATCCAGA
JMFF031P24- ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
rJMFF018C14+ ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
rJMFF032O12+ ATCCAGACNCACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
JMFF025I04- ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
rJMFF025I04+ ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
____________________________________________________________
consensus ATCCAGACACACAGGTTGAAGTACTTCAGCTGCTCCTGAAGGCTTGTGATTCTGCTGAAA
. : . : . : . : . : . :
JMFN009L05- TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTCTGGTGAACG
rJMSF013D08+ TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTCTGGTGAACG
rJMFF031P24+ TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTCTGGTGAACG
JMFF031P24- TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATT
rJMFF018C14+ TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTCTGGTGAACG
rJMFF032O12+ TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTNTGGTGAACG
JMFF025I04- TTTTTTCAGCAA
rJMFF025I04+ TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTCTGGTGAACG
____________________________________________________________
consensus TTTTTTCAGCAAAGTGCAAGAAGCTTGTTTTCGAATATGCCCCTCTGATTCTGGTGAACG
. : . : . : . : . : . :
JMFN009L05- CCGAGCAGTTC
rJMSF013D08+ CCGAGCAGTTCCTAGAAACAAATGACGTCTGCACTTTGCTACATGTTTGCCCCTCGCCAA
rJMFF031P24+ CCGAGCAGTTCCTAGAAACAAATGACGTCTGCACTTTGCTACATGTTTGCCCCTCGCCAA
rJMFF018C14+ CCGAGCAGTTCCTAGAAACAAATGACGTCTGCACTTTGCTACATGTTTGCCCCTCGCCAA
rJMFF032O12+ CCGAGCAGTTCNTAGAAACAAATGACGTNTGCACTTTGCTACATGTTTGCCCCTCGCCAA
rJMFF025I04+ CCGAGCAGTTCCTAGAAACAAATGACGTCTGCACTTTGCTACATGTTTGCCCCTCGCCAA
rJMFF032O11+ TACATGTTTGCCCNTCGCCAA
____________________________________________________________
consensus CCGAGCAGTTCCTAGAAACAAATGACGTCTGCACTTTGCTACATGTTTGCCCCTCGCCAA
. : . : . : . : . : . :
rJMSF013D08+ CTATTGGAATTGA
rJMFF031P24+ CTATTGGAATTGA
rJMFF018C14+ CTATTGGAATTGA
rJMFF032O12+ CTATTGGAATNGATTTAGCATTACNTAGGATGGAGGAGTCGAGGGGACTCGAGGCATTCT
rJMFF025I04+ CTATTGGAATTGATTTAGCATTACCTAGGATGGAGGAGTCGAGGGGACTCGAGGCATTCT
rJMFF032O11+ CTATTGGAATTGANTTAGCATTACNTAGGATGGAGGAGTCGAGGGGACTCGAGGCATTCT
____________________________________________________________
consensus CTATTGGAATTGATTTAGCATTACCTAGGATGGAGGAGTCGAGGGGACTCGAGGCATTCT
. : . : . : . : . : . :
rJMFF032O12+ CCATNTTAAGGAAGAAAACCAGTGGAGACCTTGTTCACATGTNGTAGACTGTGGTTTGCT
rJMFF025I04+ CCATCTTAAGGAAGAAAACCAGTGGAGACCTTGTTCACATGTTGTAGACTGTGGTTTGCT
rJMFF032O11+ CCATNTTAAGGAAGAAAACCAGTGGAGNCCTTGTTCACATGTTGTAGACTGTGGTTTGCT
____________________________________________________________
consensus CCATCTTAAGGAAGAAAACCAGTGGAGACCTTGTTCACATGTTGTAGACTGTGGTTTGCT
. : . : . : . : . : . :
rJMFF032O12+ TTCTTTTACTGGTGTGAGGGAGA
rJMFF025I04+ TTCTTTTACTGGTGTGAGGGAGATGAATTGCGACTTTGGCTTATATACTTACTATAT
rJMFF032O11+ TTCTTTTACTGGTGTGAGGGAGANGAATTGCGACTTTGNCTTATATACTTNCTATATAGT
____________________________________________________________
consensus TTCTTTTACTGGTGTGAGGGAGATGAATTGCGACTTTGGCTTATATACTTACTATATAGT