Contig 009716:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029C12Sequence602006604 (4)ref|XP_007023462.1|3e-66Magnesium transporter 2 isoform 2 [Theobroma cacao] gb|EOY26084.1| Magnesium tra670009716 (5)ref|XP_009764804.1|4e-75PREDICTED: magnesium transporter MRS2-1, partial [Nicotiana sylvestris]
JMSF030B11Sequence113009716 (5)
JMSF030C11Sequence658006604 (4)ref|XP_011034560.1|3e-76PREDICTED: magnesium transporter MRS2-1 isoform X1 [Populus euphratica]811009716 (5)ref|XP_009764804.1|2e-95PREDICTED: magnesium transporter MRS2-1, partial [Nicotiana sylvestris]
JMSF031C11Sequence194009716 (5)ref|XP_006356254.1|3e-07PREDICTED: magnesium transporter MRS2-1-like [Solanum tuberosum]
JMSF032C21Sequence656006604 (4)ref|XP_011034560.1|1e-74PREDICTED: magnesium transporter MRS2-1 isoform X1 [Populus euphratica]673009716 (5)ref|XP_009764804.1|5e-80PREDICTED: magnesium transporter MRS2-1, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF030C11+ GTTCAAAAGGTTAGAGATGAGAT
                      ____________________________________________________________
consensus GTTCAAAAGGTTAGAGATGAGAT
 
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rJMSF030C11+ AGAGCCAACTTATGGATGATGATGGAGACATGGCTGAAATGTATCTTACAGAGAAGAAAA
                      ____________________________________________________________
consensus AGAGCCAACTTATGGATGATGATGGAGACATGGCTGAAATGTATCTTACAGAGAAGAAAA
 
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rJMSF030C11+ TGCGCATGGAATCATCATCACCATATGGTGATCATCAGTCTTTGATGGGGTTCAGGTCAA
                      ____________________________________________________________
consensus TGCGCATGGAATCATCATCACCATATGGTGATCATCAGTCTTTGATGGGGTTCAGGTCAA
 
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rJMSF030B11+ AAAGCN
rJMSF030C11+ ATGATGGCGCGCTATCTGTTTCTGCTCCAGTTTCTCCTGTTTCTTCACCTCCTGAAAGCA
rJMFF029C12+ AAAGCA
                      ____________________________________________________________
consensus ATGATGGCGCGCTATCTGTTTCTGCTCCAGTTTCTCCTGTTTCTTCACCTCCTGAAAGCA
 
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rJMSF030B11+ GGAAGCTCGAAAANAGTTCGAGCATTGTGAGAAGCNGACATGAGAGCACGAGAAGCTCAG
rJMSF030C11+ GGAAGCTTGAAAAAAGTTTGAGCATTGTGAGAAGCAGACATGAGAGCACGAGAAGCTCAG
rJMFF029C12+ GGAAGCTTGAAAAAAGTTTGAGCATTGTGAGAAGCAGACATGAGAGCACGAGAAGCTCAG
                      ____________________________________________________________
consensus GGAAGCTTGAAAAAAGTTTGAGCATTGTGAGAAGCAGACATGAGAGCACGAGAAGCTCAG
 
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rJMSF030B11+ AAANCCTCACAGAAGCTCAANGTATAGAAGAGC
rJMSF030C11+ AAAGCCTCACAGAAGCTCAAAGTATAGAAGAGCTTGAGATGCTGTTGGAGGCTTATTTTG
rJMFF029C12+ AAAGCCTCACAGAAGCTCAAAGTATAGAAGAGCTTGAGATGCTGTTGGAGGCTTATTTTG
                      ____________________________________________________________
consensus AAAGCCTCACAGAAGCTCAAAGTATAGAAGAGCTTGAGATGCTGTTGGAGGCTTATTTTG
 
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rJMSF030C11+ TCGTCATTGATAGCACCCTTAATAAGTTGACTTCGCTCAAGGAATATATTGATGACACGG
rJMFF029C12+ TCGTCATTGATAGCACCCTTAATAAGTTGACTTCGCTCAAGGAATATATTGATGACACGG
                      ____________________________________________________________
consensus TCGTCATTGATAGCACCCTTAATAAGTTGACTTCGCTCAAGGAATATATTGATGACACGG
 
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rJMSF030C11+ AAGACTTCATTAACATTCAACTGGACAATGTTCGGAACCAGCTGATACAGTTTGAGTTGA
rJMSF032C21+ GGACAATGTTCGGAACCAGCTGATACAGTTTGAGTTGA
rJMFF029C12+ AAGACTTCATTAACATTCAACTGGACAATGTTCGGAACCAGCTGATACAGTTTGAGTTGA
                      ____________________________________________________________
consensus AAGACTTCATTAACATTCAACTGGACAATGTTCGGAACCAGCTGATACAGTTTGAGTTGA
 
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rJMSF031C11+ CGTGGTAGCGGGGATATTTGGGA
rJMSF030C11+ TACTCACAACCGCGACGTTTGTAGTTGCAATCTTTGGCGTGGTAGCGGGGATATTTGGGA
rJMSF032C21+ TACTCACAACCGCGACGTTTGTAGTTGCAATCTTTGGCGTGGTAGCGGGGATATTTGGGA
rJMFF029C12+ TACTCACAACCGCGACGTTTGTAGTTGCAATCTTTGGCGTGGTAGCGGGGATATTTGGGA
                      ____________________________________________________________
consensus TACTCACAACCGCGACGTTTGTAGTTGCAATCTTTGGCGTGGTAGCGGGGATATTTGGGA
 
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rJMSF031C11+ TGAATNTTGAAATAGCATTGTTNGAAAAAANGANTNCATTCAAGGTGGGTGCTTATACTC
rJMSF030C11+ TGAATTTTGAAATAGCATTGTTTGAAAAAAAGAATGCATTCAA-GTGGGTGCTTATAATC
rJMSF032C21+ TGAATTTTGAAATAGCATTGTTTGAAAAAAAGAATGCATTCAA-GTGGGTGCTTATAATC
rJMFF029C12+ TGAATTTTGAAATAGCATTGTTTGAAAAAAAGAATGCATTCAA-GTGGGTGCTTATAATC
                      ____________________________________________________________
consensus TGAATTTTGAAATAGCATTGTTTGAAAAAAAGAATGCATTCAA-GTGGGTGCTTATAATC
 
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rJMSF031C11+ ACAGGAGTGAGTGGAATGGTTGTNTTCTTCTCATTTTTANGNTTCNTCAAGTACAAAAGA
rJMSF030C11+ ACAGGAGTGAGTGGAATGGTTGTTTTCTTTTCATTTTTATGGTTCTTCAAGTACAAAAGA
rJMSF032C21+ ACAGGAGTGAGTGGAATGGTTGTTTTCTTTTCATTTTTATGGTTCTTCAAGTACAAAAGA
rJMFF029C12+ ACAGGAGTGAGTGGAATGGTTGTTTTCTTTTCATTTTTATGGTTCTTCAAGTACAAAAGA
                      ____________________________________________________________
consensus ACAGGAGTGAGTGGAATGGTTGTTTTCTTTTCATTTTTATGGTTCTTCAAGTACAAAAGA
 
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rJMSF031C11+ NNGATGCCACTATAGATGGTTTCGNNTATCAAANTACGTACCCCATCCATC
rJMSF030C11+ CTGATGCCACTATAGATGGTTTCGTTTATCAAACTACGTACCCCATCCATCCATTATTGG
rJMSF032C21+ CTGATGCCACTATAGATGGTTTCGTTTATCAAACTACGTACCCCATCCATCCATTATTGG
rJMFF029C12+ CTGATGCCACTATAGATGGTTTCGTTTATCAAACTACGTACCCCATCCATCCATTATTGG
                      ____________________________________________________________
consensus CTGATGCCACTATAGATGGTTTCGTTTATCAAACTACGTACCCCATCCATCCATTATTGG
 
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rJMSF030C11+ CTCCTCACAAATATAAGTATAGTGATTCTAGGTAGAGTTCAGGAACATTTAAAATATTCA
rJMSF032C21+ CTCCTCACAAATATAAGTATAGTGATTCTAGGTAGAGTTCAGGAACATTTAAAATATTCA
rJMFF029C12+ CTCCTCACAAATATAAGTATAGTGATTCTAGGTAGAGTTCAGGAACATTTAAAATATTCA
                      ____________________________________________________________
consensus CTCCTCACAAATATAAGTATAGTGATTCTAGGTAGAGTTCAGGAACATTTAAAATATTCA
 
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rJMSF030C11+ CAGTATTTGACTTACTGTCAAATGTTTCAGTCATTGAAAACAATACTATTCCATGTATTA
rJMSF032C21+ CAGTATTTGACTTACTGTCAAATGTTTCAGTCATTGAAAACAATACTATTCCATGTATTA
rJMFF029C12+ CAGTATTTGACTTACTGTCAAATGTTTCAGTCATTGAAAACAATACTATTCCATGTATTA
                      ____________________________________________________________
consensus CAGTATTTGACTTACTGTCAAATGTTTCAGTCATTGAAAACAATACTATTCCATGTATTA
 
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rJMSF030C11+ TAAGACATT
rJMSF032C21+ TAAGACATTATATTCTGCAAACAT
rJMFF029C12+ TAAGACATTATATTCTGCAAACATTGTGATAAAATAAATATATATCCAATAAGAAAAAAG
                      ____________________________________________________________
consensus TAAGACATTATATTCTGCAAACATTGTGATAAAATAAATATATATCCAATAAGAAAAAAG