Contig 009714:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F21Sequence470009714 (4)649009714 (4)
JMFF027P19Sequence561009714 (4)661009714 (4)

Alignment

This contig is upended


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rJMFF005F21-                                                                    TT
rJMFF027P19-                                                                    TT
                      ____________________________________________________________
consensus                                                                       TT
 
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rJMFF005F21-          TTGTCTACATAAGAAGCCAAGAATATATAGGGAAGAGAAACAGAAAAAGAAACGGAAACC
rJMFF027P19-          TTGTCTACATAAGAAGCCAAGAATATATAGGGAAGAGAAACAGAAAAAGAAACGGAAACC
                      ____________________________________________________________
consensus             TTGTCTACATAAGAAGCCAAGAATATATAGGGAAGAGAAACAGAAAAAGAAACGGAAACC
 
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rJMFF005F21-          GAAAAGTTGAACAAAAGTATACATTCATAATTCATGAACCATGAATGTTTCCCATCATTG
JMFF027P19+                                                ACCATGAATGTTTCCCATCATTG
rJMFF027P19-          GAAAAGTTGAACAAAAGTATACATTCATAATTCATGAACCATGAATGTTTCCCATCATTG
                      ____________________________________________________________
consensus             GAAAAGTTGAACAAAAGTATACATTCATAATTCATGAACCATGAATGTTTCCCATCATTG
 
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rJMFF005F21-          CAAAAGAGGGCTCGTACTTTCAAAATATTCTACATTAGCCCCACACCATTCCCATCTTCA
JMFF027P19+           CAAAAGAGGGCTCGTACTTTCAAAATATTCTACATTAGCCCCACACCATTCCCATCTTCA
rJMFF027P19-          CAAAAGAGGGCTCGTACTTTCAAAATATTCTACATTAGCCCCACACCATTCCCATCTTCA
                      ____________________________________________________________
consensus             CAAAAGAGGGCTCGTACTTTCAAAATATTCTACATTAGCCCCACACCATTCCCATCTTCA
 
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rJMFF005F21-          ACCTCCTCGCGGCTGTACACAGTAGATCCAATCACCAAACCCAACTGATCTTGTAAGTAC
JMFF027P19+           ACCTCCTCGCGGCTGTACACAGTAGATCCAATCACCAAACCCAACTGATCTTGTAAGTAC
JMFF005F21+                   GCGGCTGTACACAGTAGATCCAATCACCAAACCCAACTGATCTTGTAAGTAC
rJMFF027P19-          ACCTCCTCGCGGCTGTACACAGTAGATCCAATCACCAAACCCAACTGATCTTGTAAGTAC
                      ____________________________________________________________
consensus             ACCTCCTCGCGGCTGTACACAGTAGATCCAATCACCAAACCCAACTGATCTTGTAAGTAC
 
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rJMFF005F21-          CGGTGCAACAGCGGCTTCTCGTTGCATCGGCCCTCCTCGCAGCGGCACAACCCATCTCCG
JMFF027P19+           CGGTGCAACAGCGGCTTCTCGTTGCATCGGCCCTCCTCGCAGCGGCACAACCCATCTCCG
JMFF005F21+           CGGTGCAACAGCGGCTTCTCGTTGCATCGGCCCTCCTCGCAGCGGCACAACCCATCTCCG
rJMFF027P19-          CGGTGCAACAGCGGCTTCTCGTTGCATCGGCCCTCCTCGCAGCGGCACAACCCATCTCCG
                      ____________________________________________________________
consensus             CGGTGCAACAGCGGCTTCTCGTTGCATCGGCCCTCCTCGCAGCGGCACAACCCATCTCCG
 
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rJMFF005F21-          CCGTGTCCGTCAAAACCCTCCGGCGATCTCAACTTCCCTCGGCGACGGCGGCAGAAACGG
JMFF027P19+           CCGTGTCCGTCAAAACCCTCCGGCGATCTCAACTTCCCTCGGCGACGGCGGCAGAAACGG
JMFF005F21+           CCGTGTCCGTCAAAACCCTCCGGCGATCTCAACTTCCCTCGGCGACGGCGGCAGAAACGG
rJMFF027P19-          CCGTGTCCGTCAAAACCCTCCGGCGATCTCAACTTCCCTCGGCGACGGCGGCAGAAACGG
                      ____________________________________________________________
consensus             CCGTGTCCGTCAAAACCCTCCGGCGATCTCAACTTCCCTCGGCGACGGCGGCAGAAACGG
 
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rJMFF005F21-          AAGTAAATTTCGAGGGATAAAATTAACGGGCACGTAGCGCAGAGCAGCGGGAGAAGAAGG
JMFF027P19+           AAGTAAATTTCGAGGGATAAAATTAACGGGCACGTAGCGCAGAGCAGCGGGAGAAGAAGG
JMFF005F21+           AAGTAAATTTCGAGGGATAAAATTAACGGGCACGTAGCGCAGAGCAGCGGGAGAAGAAGG
rJMFF027P19-          AAGTAAATTTCGAGGGATAAAATTAACGGGCACGTAGCGCAGAGCAGCGGGAGAAGAAGG
                      ____________________________________________________________
consensus             AAGTAAATTTCGAGGGATAAAATTAACGGGCACGTAGCGCAGAGCAGCGGGAGAAGAAGG
 
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rJMFF005F21-          GGAGAGCAGAAGAGGAGGAAGAGGCAGCGACTGAGACGGCGGCGATTGAGCCAAGAAGCG
JMFF027P19+           GGAGAGCAGAAGAGGAGGAAGAGGCAGCGACTGAGACGGCGGCGATTGAGCCAAGAAGCG
JMFF005F21+           GGAGAGCAGAAGAGGAGGAAGAGGCAGCGACTGAGACGGCGGCGATTGAGCCAAGAAGCG
rJMFF027P19-          GGAGAGCAGAAGAGGAGGAAGAGGCAGCGACTGAGACGGCGGCGATTGAGCCAAGAAGCG
                      ____________________________________________________________
consensus             GGAGAGCAGAAGAGGAGGAAGAGGCAGCGACTGAGACGGCGGCGATTGAGCCAAGAAGCG
 
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rJMFF005F21-          AAGATCATCCCGAGGAAATGAATCGGCGAGGAACAGATGGAGACGGAGGCCGAAGACGCG
JMFF027P19+           AAGATCATCCCGAGGAAATGAATCGGCGAGGAACAGATGGAGACGGAGGCCGAAGACGCG
JMFF005F21+           AAGATCATCCCGAGGAAATGAATCGGCGAGGAACAGATGGAGACGGAGGCCGAAGACGCG
rJMFF027P19-          AAGATCATCCCGAGGAAATGAATCGGCGAGGAACAGATGGAGACGGAGGCCGAAGACGCG
                      ____________________________________________________________
consensus             AAGATCATCCCGAGGAAATGAATCGGCGAGGAACAGATGGAGACGGAGGCCGAAGACGCG
 
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rJMFF005F21-          GCGTCGTCATCGTTGCGATCAGCGGGCGCGAGGAGCGGATTGGAGGTTTGGGTTTGTTGG
JMFF027P19+           GCGTCGTCATCGTTGCGATCAGCGGGCGCGAGGAGCGGATT-GAGGTTTGGGTTTGTTGG
JMFF005F21+           GCGTCGTCATCGTTGCGATCAGCGGGCGCGAGGAGCGGATT-GAGGTTTGGGTTTGTTGG
rJMFF027P19-          GCGTCGTCATCGTTGCGATCAGCGGGCGCGAGGAGCGGATT-GAGGTTTGGGTTTGTTGG
                      ____________________________________________________________
consensus             GCGTCGTCATCGTTGCGATCAGCGGGCGCGAGGAGCGGATT-GAGGTTTGGGTTTGTTGG
 
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rJMFF005F21-          TAAAGCAGCATACGCAGGCCCGTGTGATTGCGTACACATAATCAACG             
JMFF027P19+           TAAAGCAGCATACGCAGGCCCGTGTGATTGCGTACACATAATCAACG             
JMFF005F21+           TAAAGCAGCATACGCAGGCCCGTGTGATTGCGTACACATAATCAACG             
rJMFF027P19-          TAAAGCAGCATACGCAGGCCCGTGTGATTGCGTACACATAATCAACGGTGTGGGGAAGAT
                      ____________________________________________________________
consensus             TAAAGCAGCATACGCAGGCCCGTGTGATTGCGTACACATAATCAACGGTGTGGGGAAGAT