Contig 009697:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022L14Sequence536009697 (3)ref|XP_009803173.1|2e-32PREDICTED: protein WVD2-like 1 [Nicotiana sylvestris]716009697 (3)ref|XP_009803173.1|6e-36PREDICTED: protein WVD2-like 1 [Nicotiana sylvestris]
JMSF030G17Sequence694009697 (3)ref|XP_009803173.1|3e-60PREDICTED: protein WVD2-like 1 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF022L14-                                                                   AGCA
                      ____________________________________________________________
consensus                                                                     AGCA
 
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JMFF022L14-           GAAAGGCAAAATCTTTATGGGGAGGGAGGTTGCCAGTTTACGTATCGACAAGAAAGCCAA
                      ____________________________________________________________
consensus             GAAAGGCAAAATCTTTATGGGGAGGGAGGTTGCCAGTTTACGTATCGACAAGAAAGCCAA
 
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JMFF022L14-           TTTAAAACCAAATTGTAATGGCTCAGAGGCACTTGGAAGAGACGCGAATATTGAGGATTG
                      ____________________________________________________________
consensus             TTTAAAACCAAATTGTAATGGCTCAGAGGCACTTGGAAGAGACGCGAATATTGAGGATTG
 
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JMFF022L14-           CGGTGAGAAGCAAGATGTGCTATCTGTTAAGATCACGAATTGTGAGGCCGGGGAGGGAAA
                      ____________________________________________________________
consensus             CGGTGAGAAGCAAGATGTGCTATCTGTTAAGATCACGAATTGTGAGGCCGGGGAGGGAAA
 
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JMFF022L14-           AGTTGTGAAAGCTGACACTCTAAAGTCGAGTGACAAGAAGTCGAACTCAACCGTGAAGCC
                      ____________________________________________________________
consensus             AGTTGTGAAAGCTGACACTCTAAAGTCGAGTGACAAGAAGTCGAACTCAACCGTGAAGCC
 
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JMFF022L14-           TGCCTCGGAGTCCCCCGGCACTGGTCTTGTTGCCAAGCATAGTGCTAACGGTGTTGAGAC
                      ____________________________________________________________
consensus             TGCCTCGGAGTCCCCCGGCACTGGTCTTGTTGCCAAGCATAGTGCTAACGGTGTTGAGAC
 
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JMFF022L14-           TACTGATACTGGTTCGAACTGCTCTTTGAAATCGAACGATCTGCACTCCCCGTTGAGTGT
                      ____________________________________________________________
consensus             TACTGATACTGGTTCGAACTGCTCTTTGAAATCGAACGATCTGCACTCCCCGTTGAGTGT
 
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JMFF022L14-           AAAAAGATCACAGCAAATTCCTCTGGTGTCAAGAAATGATAGGAAACACCATGACGAAGA
                      ____________________________________________________________
consensus             AAAAAGATCACAGCAAATTCCTCTGGTGTCAAGAAATGATAGGAAACACCATGACGAAGA
 
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JMFF022L14-           AGATAGTTGGTCCTTGGCTTCTTCTGCTGCAGCATCTGTGAGAACTCTCAGATCTAAAAT
rJMSF030G17+                                                                 AAAAT
                      ____________________________________________________________
consensus             AGATAGTTGGTCCTTGGCTTCTTCTGCTGCAGCATCTGTGAGAACTCTCAGATCTAAAAT
 
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JMFF022L14-           TACTGTTCCAGTTGCTCCGACTTTTAAATCTGCAGATCGAGCTGCAAGACGC        
rJMSF030G17+          TACTGTTCCAGTTGCTCCGACTTTTAAATNTGCAGATCGAGCTGCAAGACGCAGAGAGTT
                      ____________________________________________________________
consensus             TACTGTTCCAGTTGCTCCGACTTTTAAATCTGCAGATCGAGCTGCAAGACGCAGAGAGTT
 
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rJMSF030G17+          TTACTCAAAGTTGGGGGAAAAACACAAAGCTTTGGAAGCAGAGAAACAAAAATGTGCTGC
                      ____________________________________________________________
consensus             TTACTCAAAGTTGGGGGAAAAACACAAAGCTTTGGAAGCAGAGAAACAAAAATGTGCTGC
 
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rJMSF030G17+          CAGAACTAAGGAAGAAGAGGAAGCAGTTATAAAGCAGATTAGAAAGAACATGGTCTATAA
rJMFF022L14+              ACTAAGGAAGAAGAGGAAGCAGTTATAAAGCAGATTAGAAAGAACATGGTCTATAA
                      ____________________________________________________________
consensus             CAGAACTAAGGAAGAAGAGGAAGCAGTTATAAAGCAGATTAGAAAGAACATGGTCTATAA
 
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rJMSF030G17+          GGCAAATCCAGTTCCAAGCTTTTACCATGAAGGGCCTCCACCAAAAGCCAAACTTAAGAA
rJMFF022L14+          GGCAAATCCAGTTCCAAGCTTTTACCATGAAGGGCCTCCACCAAAAGCCAAACTTAAGAA
                      ____________________________________________________________
consensus             GGCAAATCCAGTTCCAAGCTTTTACCATGAAGGGCCTCCACCAAAAGCCAAACTTAAGAA
 
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rJMSF030G17+          ACTACCTCTCACTCGTGCAAAATCACCCAACCTTTCACGGAGAAAAAGCTGCAGTGATGC
rJMFF022L14+          ACTACCTCTCACTCGTGCAAAATCACCCAACCTTTCACGGAGAAAAAGCTGCAGTGATGC
                      ____________________________________________________________
consensus             ACTACCTCTCACTCGTGCAAAATCACCCAACCTTTCACGGAGAAAAAGCTGCAGTGATGC
 
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rJMSF030G17+          TGTTGTTTCTCCAGAAGTGAAGCAAGTTTATGGTCGGGGTCGTCACAGCATTGGCGCTTA
rJMFF022L14+          TGTTGTTTCTCCAGAAGTGAAGCAAGTTTATGGTCGGGGTCGTCACAGCATTGGCGCTTA
                      ____________________________________________________________
consensus             TGTTGTTTCTCCAGAAGTGAAGCAAGTTTATGGTCGGGGTCGTCACAGCATTGGCGCTTA
 
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rJMSF030G17+          CAGGCAAGGGAATACGAGCGCCATAACTCCCAAAAGTAAAGCCCTGGTGAACCGGGAGAA
rJMFF022L14+          CAGGCAAGGGAATACGAGCGCCATAACTCCCAAAAGTAAAGCCCTGGTGAACCGGGAGAA
                      ____________________________________________________________
consensus             CAGGCAAGGGAATACGAGCGCCATAACTCCCAAAAGTAAAGCCCTGGTGAACCGGGAGAA
 
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rJMSF030G17+          TGTTAATGGAACTAGCAGTGCGAAACCAGTAAACGTTACAAGGAAAACTCCACCAAACCA
rJMFF022L14+          TGTTAATGGAACTAGCAGTGCGAAACCAGTAAACGTTACAAGGAAAACTCCACCAAACCA
                      ____________________________________________________________
consensus             TGTTAATGGAACTAGCAGTGCGAAACCAGTAAACGTTACAAGGAAAACTCCACCAAACCA
 
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rJMSF030G17+          GGCAAAGGAAGCTCCTGCAAACGACTCGTCAGTGAAGGAGACGAATGCAAGTCCAACTAA
rJMFF022L14+          GGCAAAGGAAGCTCCTGCAAACGACTCGTCAGTGAAGGAGACGAATGCAAGTCCAACTAA
                      ____________________________________________________________
consensus             GGCAAAGGAAGCTCCTGCAAACGACTCGTCAGTGAAGGAGACGAATGCAAGTCCAACTAA
 
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rJMSF030G17+          TGACGTAAAGGAAACTCCAGCCGAAGAGGTTAAGGAAAGTAATCGTACTATTATAGATTT
rJMFF022L14+          TGACGTAAAGGAAACTCCAGCCGAAGAGGTTAAGGAAAGTAATCGTACTATTATAGATTT
                      ____________________________________________________________
consensus             TGACGTAAAGGAAACTCCAGCCGAAGAGGTTAAGGAAAGTAATCGTACTATTATAGATTT
 
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rJMSF030G17+          TCAGCCGAGCGGGCATATTGCTGCTCAATCATGAAGCAGTTTAGCTCC-TTTTTTTTGTG
rJMFF022L14+          TCAGCCGAGCGGGCATATTGCTGCTCAATCATGAAGCAGTTTAGCTCCTTTTTTTTTGTG
                      ____________________________________________________________
consensus             TCAGCCGAGCGGGCATATTGCTGCTCAATCATGAAGCAGTTTAGCTCCTTTTTTTTTGTG
 
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rJMSF030G17+          TTTTTTATTGTACTTTTAGAGGAAAACGAA                              
rJMFF022L14+          TTTTTTATTGTACTTTTAGAGGAAAACGAACTGGACTCCTTAAAATGGTCATTTCCTTGG
                      ____________________________________________________________
consensus             TTTTTTATTGTACTTTTAGAGGAAAACGAACTGGACTCCTTAAAATGGTCATTTCCTTGG
 
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rJMFF022L14+          TTGTTGGCAATGACTTGTTGATCAATCTGTGTTGTAAATTGTGTAGCAGTTTGTGTTTTT
                      ____________________________________________________________
consensus             TTGTTGGCAATGACTTGTTGATCAATCTGTGTTGTAAATTGTGTAGCAGTTTGTGTTTTT
 
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rJMFF022L14+          TGGGTACATATTTGATGAAGAAGAGAGGCATGGAGGCATGGACTGACTTGTTTATAAACG
                      ____________________________________________________________
consensus             TGGGTACATATTTGATGAAGAAGAGAGGCATGGAGGCATGGACTGACTTGTTTATAAACG