Contig 009693:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M17Sequence689009693 (11)gb|AAF14242.1|AF110226_12e-13nuclear RNA binding protein [Nicotiana tabacum]
JMFF011E23Sequence551010722 (9)794009693 (11)gb|AAF14242.1|AF110226_16e-33nuclear RNA binding protein [Nicotiana tabacum]
JMFF013J11Sequence516010722 (9)794009693 (11)gb|AAF14242.1|AF110226_15e-33nuclear RNA binding protein [Nicotiana tabacum]
JMFF021G07Sequence489010722 (9)699009693 (11)gb|AAF14242.1|AF110226_11e-15nuclear RNA binding protein [Nicotiana tabacum]
JMFF026O15Sequence618009693 (11)ref|XP_006362472.1|4e-36PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum
JMFF028B10Sequence515010722 (9)756009693 (11)ref|XP_009613636.1|3e-29PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like isoform X2 [Nicotiana
JMFN007B14Sequence551009693 (11)ref|XP_007218155.1|9e-05hypothetical protein PRUPE_ppa007410mg [Prunus persica] gb|EMJ19354.1| hypotheti
JMSF009N13Sequence330010722 (9)765009693 (11)gb|AAF14242.1|AF110226_11e-33nuclear RNA binding protein [Nicotiana tabacum]
JMSF012I23Sequence358010722 (9)774009693 (11)gb|AAF14242.1|AF110226_17e-27nuclear RNA binding protein [Nicotiana tabacum]
JMSF025G12Sequence575010722 (9)799009693 (11)ref|XP_006362472.1|3e-38PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum
JMSF040B11Sequence643010722 (9)850009693 (11)gb|AAF14242.1|AF110226_13e-30nuclear RNA binding protein [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009N13+ TGTTAATG
rJMFF026O15+ CTGATGAGATAGCTCCGGAGACTGAAGAGTCTGTTAATG
rJMSF025G12+ CAACTGATGAGATAGCTCCGGAGACTGAAGAGTCTGTTAATG
rJMFF013J11+ TGTTAATG
rJMFF011E23+ GTTAATG
                      ____________________________________________________________
consensus CAACTGATGAGATAGCTCCGGAGACTGAAGAGTCTGTTAATG
 
. : . : . : . : . : . :
rJMSF009N13+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMFF026O15+ AAGTTGAGAAGTCTGTTGATGTTGACAANCAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMSF025G12+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMFF013J11+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAANCCGGGCATGAAGGTGCTGGAGATGCCA
rJMFF028B10+ GGGCATGAAGGTGCTGGAGATGCCA
rJMFF011E23+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMSF012I23+ CA
rJMSF040B11+ CCGGGCATGAAGGTGCTGGAGATGCCA
                      ____________________________________________________________
consensus AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
 
. : . : . : . : . : . :
rJMSF009N13+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF026O15+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMSF025G12+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF013J11+ GTAAGGATTTTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF028B10+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF011E23+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMSF012I23+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF004M17+ CGAGGATAAGGAGATGACCC
rJMSF040B11+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
                      ____________________________________________________________
consensus GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
 
. : . : . : . : . : . :
rJMSF009N13+ TTGAAGAGTATAAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF026O15+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMSF025G12+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF013J11+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF028B10+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGGGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF011E23+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGGGAAAGGCGTTGATGGCACTAAAGCCCG
rJMSF012I23+ NTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF004M17+ TTGAAGAGTATGAGAAGGTGCTNGAGGAGAAGGNAAAGGCGTTGATGGCACTAAAGCCCG
rJMSF040B11+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
                      ____________________________________________________________
consensus TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
 
. : . : . : . : . : . :
rJMSF009N13+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF026O15+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMSF025G12+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF013J11+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF028B10+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF011E23+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMSF012I23+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF004M17+ AGGAGAGAAAGGTTCGCTTNGACAAAGAATTTGCGTNTATGCAGGTGATATCAAGCAAGA
rJMSF040B11+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF021G07+ GGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
                      ____________________________________________________________
consensus AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
 
. : . : . : . : . : . :
rJMSF009N13+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF026O15+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMSF025G12+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF013J11+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF028B10+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF011E23+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMSF012I23+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF004M17+ AAAATGATGAATCTGTCTTTATTAAATTGGGATNTGAGAAGGATAAAAAGAAAGAAGCAG
rJMSF040B11+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
JMFN007B14- AAAAAGAAAGAAGCAG
rJMFF021G07+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
                      ____________________________________________________________
consensus AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
 
. : . : . : . : . : . :
rJMSF009N13+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF026O15+ GAGAAAAGGTCAAAAAGACCCAANCCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMSF025G12+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF013J11+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF028B10+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF011E23+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMSF012I23+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF004M17+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMSF040B11+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
JMFN007B14- GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF021G07+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
                      ____________________________________________________________
consensus GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
 
. : . : . : . : . : . :
rJMSF009N13+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF026O15+ GCTTCANCCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGNTATGGTGGAA
rJMSF025G12+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF013J11+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF028B10+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF011E23+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMSF012I23+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF004M17+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMSF040B11+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
JMFN007B14- GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF021G07+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
                      ____________________________________________________________
consensus GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
 
. : . : . : . : . : . :
rJMSF009N13+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF026O15+ GCAACATGAACACGANNTATGCTGAGGCTTCAGCCCCATCGATNGAAGATGTCGGGCAGT
rJMSF025G12+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF013J11+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF028B10+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF011E23+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMSF012I23+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF004M17+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMSF040B11+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
JMFN007B14- GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF021G07+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
                      ____________________________________________________________
consensus GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
 
. : . : . : . : . : . :
rJMSF009N13+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF026O15+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTNCCAGTCGAGCTCTCTTCTCTCCA
rJMSF025G12+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF013J11+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF028B10+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF011E23+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMSF012I23+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF004M17+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMSF040B11+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
JMFN007B14- TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF021G07+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
                      ____________________________________________________________
consensus TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
 
. : . : . : . : . : . :
rJMSF009N13+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF026O15+ ATTTTGCCACTTCATTTCGGNTNGAAAATGGCAGGATGT
rJMSF025G12+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF013J11+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF028B10+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF011E23+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMSF012I23+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF004M17+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMSF040B11+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
JMFN007B14- ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF021G07+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
                      ____________________________________________________________
consensus ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
 
. : . : . : . : . : . :
rJMSF009N13+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMSF025G12+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF013J11+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF028B10+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF011E23+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMSF012I23+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF004M17+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMSF040B11+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
JMFN007B14- GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF021G07+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
                      ____________________________________________________________
consensus GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
 
. : . : . : . : . : . :
rJMSF009N13+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCTTCCCCCTCCCCCCTTTTA
rJMSF025G12+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF013J11+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF028B10+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF011E23+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMSF012I23+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF004M17+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMSF040B11+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
JMFN007B14- CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF021G07+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
                      ____________________________________________________________
consensus CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
 
. : . : . : . : . : . :
rJMSF009N13+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGAT
rJMSF025G12+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGAT
rJMFF013J11+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMFF028B10+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATT
rJMFF011E23+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMSF012I23+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMFF004M17+ TATTTAGGCATTAATTTCATGATTTTACAACTTCCAGATTTTCTTAAGATTTTTAGTTTA
rJMSF040B11+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
JMFN007B14- TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMFF021G07+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
                      ____________________________________________________________
consensus TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
 
. : . : . : . : . : . :
rJMFF013J11+ TGGGATCA
rJMFF011E23+ TGGGATCAG
rJMSF012I23+ TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTT
rJMFF004M17+ NGGGATCAG
rJMSF040B11+ TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTTTGTTTC
JMFN007B14- TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTT
rJMFF021G07+ TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTTTGTTTC
                      ____________________________________________________________
consensus TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTTTGTTTC
 
. : . : . : . : . : . :
rJMSF040B11+ AAGATTATTGTTGTTGAAGTCTTCCAGTAGCTTTCTCATCT
rJMFF021G07+ AAGATTATTGTTGTTGAAGTCTTCCAGTAGCTTTCTCATCTTACTTGAGAGCATTCACAA
                      ____________________________________________________________
consensus AAGATTATTGTTGTTGAAGTCTTCCAGTAGCTTTCTCATCTTACTTGAGAGCATTCACAA