Contig 009691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021B17Sequence511013327 (5)ref|XP_009606335.1|1e-66PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tomentosiformis]698009691 (4)ref|XP_006361008.1|1e-72PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]
JMFF038J21Sequence452013327 (5)ref|XP_009606335.1|9e-40PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tomentosiformis]746009691 (4)ref|XP_006361008.1|1e-79PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]
JMSF008O19Sequence617009691 (4)ref|XP_006361008.1|1e-75PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]
JMSF018J22Sequence202013327 (5)707009691 (4)ref|XP_006361008.1|1e-77PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF038J21+                                                                    CC
                      ____________________________________________________________
consensus                                                                       CC
 
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rJMFF038J21+          AAAGAGAAGACGAACAAGGAGTCGTCGGAGTTTCCCTCGCTCGGGAACTCATGGCCGTCG
                      ____________________________________________________________
consensus             AAAGAGAAGACGAACAAGGAGTCGTCGGAGTTTCCCTCGCTCGGGAACTCATGGCCGTCG
 
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rJMFF038J21+          CCGGCGACGCTCTGAAGACGAACATAACCACCCTTGGGCCCACTCGTCCTCCCACTTTCC
rJMSF008O19+                                                                    CC
rJMSF018J22+                                                                    CC
                      ____________________________________________________________
consensus             CCGGCGACGCTCTGAAGACGAACATAACCACCCTTGGGCCCACTCGTCCTCCCACTTTCC
 
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rJMFF038J21+          GAGCAGTTCAAGTTCCTCGTCACGCTGATCAAGAGAAAAGCCCTGAAGAATTCCAAGGTG
rJMSF008O19+          GAGCAGTTCAAGTTCCTCGTCACGCTGATCAAGAGAAAAGCCCTGAAGAATTCCAAGGTG
rJMSF018J22+          GAGCAGTTCAAGTTCCTCGTCACGCTGATCAAGAGAAAAGCCCTGAAGAATTCCAAGGTG
rJMFF021B17+                                CGCTGATCAAGAGAAAAGCCCTGAAGAATTCCAAGGTG
                      ____________________________________________________________
consensus             GAGCAGTTCAAGTTCCTCGTCACGCTGATCAAGAGAAAAGCCCTGAAGAATTCCAAGGTG
 
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rJMFF038J21+          AAGCCGTACATCCCGGACTTCAAGAGAGCGTTTGAGCACTTCTGCATCCACGCCGGCGGG
rJMSF008O19+          AAGCCGTACATCCCGGACTTCAAGAGAGCGTTTGAGCACTTCTGCATCCACGCCGGCGGG
rJMSF018J22+          AAGCCGTACATCCCGGACTTCAAGAGAGCGTTTGAGCACTTCTGCATCCACGCCGGCGGG
rJMFF021B17+          AAGCCGTACATCCCGGACTTCAAGAGAGCGTTTGAGCACTTCTGCATCCACGCCGGCGGG
                      ____________________________________________________________
consensus             AAGCCGTACATCCCGGACTTCAAGAGAGCGTTTGAGCACTTCTGCATCCACGCCGGCGGG
 
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rJMFF038J21+          AGGGCGGTGCTGGACGCGCTGCAGAACAACCTTAATCTAACCGAGTGGCACATGGAGCCG
rJMSF008O19+          AGGGCGGTGCTGGACGCGCTGCAGAACAACCTTAATCTAACCGAGTGGCACATGGAGCCG
rJMSF018J22+          AGGGCGGTGCTGGACGCGCTGCAGAACAACCTTAATCTAACCGAGTGGCACATGGAGCCG
rJMFF021B17+          AGGGCGGTGCTGGACGCGCTGCAGAACAACCTTAATCTAACCGAGTGGCACATGGAGCCG
                      ____________________________________________________________
consensus             AGGGCGGTGCTGGACGCGCTGCAGAACAACCTTAATCTAACCGAGTGGCACATGGAGCCG
 
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rJMFF038J21+          TCGAGAATGACGCTCCACCGCTTCGGCAACACCTCCAGTAGCTCTCTCTGGTACGAGCTG
rJMSF008O19+          TCGAGAATGACGCTCCNCCGCTTCGGCAACACCTCCAGTAGCTCTCTCTGGTACGAGCTG
rJMSF018J22+          TCGAGAATGACGCTCCACCGCTTCGGCAACACCTCCAGTAGCTCTCTCTGGTACGAGCTG
rJMFF021B17+          TCGAGAATGACGCTCCACCGCTTCGGCAACACCTCCAGTAGCTCTCTCTGGTACGAGCTG
                      ____________________________________________________________
consensus             TCGAGAATGACGCTCCACCGCTTCGGCAACACCTCCAGTAGCTCTCTCTGGTACGAGCTG
 
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rJMFF038J21+          GCTTACACGGAAGCCAAAGGGAGGGTGAGGAAGGGGGACCGGGTTTGGCAGATCGCATTC
rJMSF008O19+          GCTTACACGGAAGCCAAAGGGAGGGTGAGGAAGGGGGACCGGGTTTGGCAGATCGCATTC
rJMSF018J22+          GCTTACACGGAAGCCAAAGGGAGGGTGAGGAAGGGGGACCGGGTTTGGCAGATCGCATTC
rJMFF021B17+          GCTTACACGGAAGCCAAAGGGAGGGTGAGGAAGGGGGACCGGGTTTGGCAGATCGCATTC
                      ____________________________________________________________
consensus             GCTTACACGGAAGCCAAAGGGAGGGTGAGGAAGGGGGACCGGGTTTGGCAGATCGCATTC
 
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rJMFF038J21+          GGGTCGGGCTTCAAGTGTAATAGCGCCGTGTGGAGAGCCCTAAAGACTGTTCACAACACA
rJMSF008O19+          GGGTCGGGCTTCAAGTGTAATAGCGCCGTGTGGAGAGCCNTAAAGACTGTTCACAACACA
rJMSF018J22+          GGGTCGGGCTTCAAGTGTAATAGCGCCGTGTGGAGAGCCCTAAAGACTGTTCACAACACA
rJMFF021B17+          GGGTCGGGCTTCAAGTGTAATAGCGCCGTGTGGAGAGCCCTAAAGACTGTTCACAACACA
                      ____________________________________________________________
consensus             GGGTCGGGCTTCAAGTGTAATAGCGCCGTGTGGAGAGCCCTAAAGACTGTTCACAACACA
 
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rJMFF038J21+          GAGGCTTCTCTCAAGGGGAACCCATGGGCGGACTGTGTCCACCGCTACCCAGTCAAGATT
rJMSF008O19+          GAGGCTTCTCTCAAGGGGAACCCATGGGCGGACTGTGTCCACCGCTACCCAGTCAAGATT
rJMSF018J22+          GAGGCTTCTCTCAAGGGGAACCCATGGGCGGACTGTGTCCACCGCTACCCAGTCAAGATT
rJMFF021B17+          GAGGCTTCTCTCAAGGGGAACCCATGGGCGGACTGTGTCCACCGCTACCCAGTCAAGATT
                      ____________________________________________________________
consensus             GAGGCTTCTCTCAAGGGGAACCCATGGGCGGACTGTGTCCACCGCTACCCAGTCAAGATT
 
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rJMFF038J21+          GATATTAGTTGATCAGCTCAGCTCACCTCATAAATAAGTCATGATTCTATTTATTATATA
rJMSF008O19+          GATATTAGTTGATCAGCTCAGCTCACCTCATAAATAAGTCATGATTCTATTTATTATATA
rJMSF018J22+          GATATTAGTTGATCAGCTCAGCTCACCTCATAAATAAGTCATGATTCTATTTATTATATA
rJMFF021B17+          GATATTAGTTGATCAGCTCAGCTCACCTCATAAATAAGTCATGATTCTATTTATTATATA
                      ____________________________________________________________
consensus             GATATTAGTTGATCAGCTCAGCTCACCTCATAAATAAGTCATGATTCTATTTATTATATA
 
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rJMFF038J21+          TACATATATGTTATTATTGTTGTCATCCGCTACTAGCTTCTCCCAAAAGGTTAAATCCCG
rJMSF008O19+          TACATATATGTTATTATTGTTGTCATCCGCTACTAGCTTCTCCCAAAAGGTTAAATCCCG
rJMSF018J22+          TACATATATGTTATTATTGTTGTCATCCGCTACTAGCTTCTCCCAAAAGGTTAAATCCCG
rJMFF021B17+          TACATATATGTTATTATTGTTGTCATCCGCTACTAGCTTCTCCCAAAAGGTTAAATCCCG
                      ____________________________________________________________
consensus             TACATATATGTTATTATTGTTGTCATCCGCTACTAGCTTCTCCCAAAAGGTTAAATCCCG
 
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rJMFF038J21+          ACCTGACTGATCATTTGGGTGGATGCTCAGCTCCTAGCTAGCTAGCTTGCTAGTCATACA
rJMSF008O19+          ACCTGACTGATCATTTGGGTGGATGCTCAGCTCCTAGCTAGCTAGCTTGCTAGTCATACA
rJMSF018J22+          ACCTGACTGATCATTTGGGTGGATGCTCAGCTCCTAGCTAGCTAGCTTGCTAGTCATACA
rJMFF021B17+          ACCTGACTGATCATTTGGGTGGATGCTCAGCTCCTAGCTAGCTAGCTTGCTAGTCATACA
                      ____________________________________________________________
consensus             ACCTGACTGATCATTTGGGTGGATGCTCAGCTCCTAGCTAGCTAGCTTGCTAGTCATACA
 
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rJMFF038J21+          TGCATGAGTGATTGTTGTTATTAT                                    
rJMSF008O19+          TGCATGAGTGATTGT                                             
rJMSF018J22+          TGCATGAGTGATTGTTGTTATTATTGTTGTTGTTAGTGGCCAATACATCTATTATACTGC
rJMFF021B17+          TGCATGAGTGATTGTTGTTATTATTGTTGTTGTTAGTGGCTAATACATCTATTATACTGC
                      ____________________________________________________________
consensus             TGCATGAGTGATTGTTGTTATTATTGTTGTTGTTAGTGGCTAATACATCTATTATACTGC
 
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rJMSF018J22+          AGCCGAGTTAAGTTGTCAAACAATTAAGAAAGTG                          
rJMFF021B17+          AGCCGAGTTAAGTTGTCAAACAATTAAGAAAGTGTACTTGAAAGTGATTAATTCAGAGAT
                      ____________________________________________________________
consensus             AGCCGAGTTAAGTTGTCAAACAATTAAGAAAGTGTACTTGAAAGTGATTAATTCAGAGAT