| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001G01 | Sequence | 453 | 009671 (7) | emb|CDX83938.1| | 1e-38 | BnaC08g17070D [Brassica napus] | |||||
| JMFF016F24 | Sequence | 519 | 002059 (7) | ref|XP_009762267.1| | 144 | PREDICTED: uncharacterized protein LOC104214314 [Nicotiana sylvestris] | 749 | 009671 (7) | ref|XP_007205230.1| | 6e-98 | hypothetical protein PRUPE_ppa006017mg [Prunus persica] gb|EMJ06429.1| hypotheti |
| JMFF022L09 | Sequence | 461 | 002059 (7) | ref|XP_009762267.1| | 116 | PREDICTED: uncharacterized protein LOC104214314 [Nicotiana sylvestris] | 726 | 009671 (7) | ref|XP_007205230.1| | 3e-97 | hypothetical protein PRUPE_ppa006017mg [Prunus persica] gb|EMJ06429.1| hypotheti |
| JMFF028B22 | Sequence | 516 | 002059 (7) | ref|XP_009762267.1| | 147 | PREDICTED: uncharacterized protein LOC104214314 [Nicotiana sylvestris] | 699 | 009671 (7) | ref|XP_007205230.1| | 1e-95 | hypothetical protein PRUPE_ppa006017mg [Prunus persica] gb|EMJ06429.1| hypotheti |
| JMSF003K07 | Sequence | 339 | 002059 (7) | 766 | 009671 (7) | ref|XP_007205230.1| | 4e-103 | hypothetical protein PRUPE_ppa006017mg [Prunus persica] gb|EMJ06429.1| hypotheti | |||
| JMSF006J01 | Sequence | 397 | 002059 (7) | ref|XP_009762267.1| | 88.2 | PREDICTED: uncharacterized protein LOC104214314 [Nicotiana sylvestris] | 451 | 009671 (7) | ref|XP_007205230.1| | 4e-38 | hypothetical protein PRUPE_ppa006017mg [Prunus persica] gb|EMJ06429.1| hypotheti |
| JMSF042O13 | Sequence | 766 | 002059 (7) | ref|XP_009762267.1| | 305 | PREDICTED: uncharacterized protein LOC104214314 [Nicotiana sylvestris] | 642 | 009671 (7) | ref|XP_009621895.1| | 276 | PREDICTED: uncharacterized protein LOC104113438 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF003K07+ TGGAGAGGGGCAGGTGTTGGACTCCCAAAAGGTG
____________________________________________________________
consensus TGGAGAGGGGCAGGTGTTGGACTCCCAAAAGGTG
. : . : . : . : . : . :
rJMSF003K07+ ATCAAACTATGGCAATACCTGAGGGTCTCACTCTATTTGATCTTGGTGAAAGTGGTATTA
rJMFF028B22+ GTTGAAAGTGGTATTA
rJMFF022L09+ CTCTATTTGATCTTGTTGAAAGTGGTATTA
rJMFF016F24+ CTCTATTTGATCTNGTTGAAAGTGGTATTA
____________________________________________________________
consensus ATCAAACTATGGCAATACCTGAGGGTCTCACTCTATTTGATCTTGTTGAAAGTGGTATTA
. : . : . : . : . : . :
rJMSF003K07+ GCAACACAAACGCATCTGTTGGAGTGGTTGTTCGTTTGAGGCAAGAATTGTCTCTTGTGA
rJMFF028B22+ GCAACACAAACGCATCTGTTGGAGTGGTTGTTCGTTTGAGGCAAGAATTGTCTCTTGTGA
rJMSF042O13+ GTTCGTTTGAGGCAAGAATTGTCTCTTGTGA
rJMFF022L09+ GCAACACAAACGCATCTGTTGGAGTGGTTGTTCGTTTGAGGCAAGAATTGTCTCTTGTGA
rJMFF016F24+ GCAACACAAACGCATCTGTTGGAGTGGTTGTTCGTTTGAGGCAAGAATTGTCTCTTGTGA
____________________________________________________________
consensus GCAACACAAACGCATCTGTTGGAGTGGTTGTTCGTTTGAGGCAAGAATTGTCTCTTGTGA
. : . : . : . : . : . :
rJMSF003K07+ AAGATATGCCTGTTCTTATTGCAATTGACCAATATAACAATTGGTTTACATTCAGCGAGT
rJMFF028B22+ AAGATATGCCTGTTCTTATTGCAATTGACCAATATAACAATTGGTTTACATTCAGCGAGT
rJMSF042O13+ AAGATATGCCTGTTCTTATTGCAATTGACCAATATAACAATTGGTTTACATTCAGCGAGT
rJMFF022L09+ AAGATATGCCTGTTCTTATTGCAATTGACCAATATAACAATTGGTTTACATTCAGCGAGT
rJMFF016F24+ AAGATATGCCTGTTCTTATTGCAATTGACCAATATAACAATTGGTTTACATTCAGCGAGT
____________________________________________________________
consensus AAGATATGCCTGTTCTTATTGCAATTGACCAATATAACAATTGGTTTACATTCAGCGAGT
. : . : . : . : . : . :
rJMSF003K07+ ACGAGGAACCAGTAACAGTACGGTCTTGCAAACCCATCCATGCTAGGGAACTTACAACTG
rJMFF028B22+ ACGAGGAACCAGTAACAGTACGGTCTTGCAAACCCATCCATGCTAGGGAACTTACAACTG
rJMSF042O13+ ACGAGGAACCAGTAACAGTACGGTCTTGCAAACCCATCCATGCTAGGGAACTTACAACTG
rJMFF022L09+ ACGAGGAACCAGTAACAGTACGGTCTTGCAAACCCATCCATGCTAGGGAACTTACAACTG
rJMFF016F24+ ACGAGGAACCAGTAACAGTACGGTCTNGCAAACCCATCCATGCTAGGGAACTTACAACTG
____________________________________________________________
consensus ACGAGGAACCAGTAACAGTACGGTCTTGCAAACCCATCCATGCTAGGGAACTTACAACTG
. : . : . : . : . : . :
rJMSF003K07+ TCAATGCATTTAGGTCCATGCTTCACAATGACATGATGGTTGGTGCTTTCTCTCATTCAA
rJMFF028B22+ TCAATGCATTTAGGTCCATGCTTCACAATGACATGATGGTTGGTGCTTTCTCTCATTCAA
rJMSF006J01+ TGGTGCTTTCTCTCATTCAA
rJMFF001G01+ ACATGATGGNTGGTGCTTTCTNTCATTCAN
rJMSF042O13+ TCAATGCATTTAGGTCCATGCTTCACAATGACATGATGGTTGGTGCTTTCTCTCATTCAA
rJMFF022L09+ TCAATGCATTTAGGTCCATGCTTCACAATGACATGATGGTTGGTGCTTTCTCTCATTCAA
rJMFF016F24+ TCAATGCATTTAGGTCCATGCTTCACAATGACATGATGGTTGGTGCTTTCTCTCATTCAA
____________________________________________________________
consensus TCAATGCATTTAGGTCCATGCTTCACAATGACATGATGGTTGGTGCTTTCTCTCATTCAA
. : . : . : . : . : . :
rJMSF003K07+ CTGCAGTA-GGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
rJMFF028B22+ CTGCAGTA-GGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
rJMSF006J01+ CTGCAGTAGGGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
rJMFF001G01+ NTGCAGTA-GGGAAANTGNGTCAAGANTTACCAAATGTTCCCCCTGATGCCCGATTAAAT
rJMSF042O13+ CTGCAGTA-GGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
rJMFF022L09+ CTGCAGTA-GGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
rJMFF016F24+ CTGCAGTA-GGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
____________________________________________________________
consensus CTGCAGTA-GGGAAACTGCGTCAAGACTTACCAAATGTTCCCACTGATGCCCGATTAAAT
. : . : . : . : . : . :
rJMSF003K07+ TTTCCTCGATATACTTTGGACGAAGCTGCTGCTGTTTGTCATTACTATCTCAGGCAAAGG
rJMFF028B22+ TTTCCTCGATATACTTTGGACGAAGCTGCTGCTGTTTGTCATTACTATCTCAGGCAAAGG
rJMSF006J01+ TTTCCTCGATATACTTTGGACGAAGCTGCTGCTGTTTGTCATTACTATCTCAGGCAAAGG
rJMFF001G01+ TTTCCGCGATATACTTTGGNCGAAGCTGNTGCTGTTTGTCATTNCTATCTCAGGCAAAGG
rJMSF042O13+ TTTCCTCGATATACTTTGGACGAAGCTGCTGCTGTTTGTCATTACTATCTCAGGCAAAGG
rJMFF022L09+ TTTCCTCGATATACTTTGGACGAAGCTGCTGCCGTTTGTCATTACTATCTCAGGCAAAGG
rJMFF016F24+ TTTCCTCGATATACTTTGGACGAAGCTGCTGCTGTTTGTCATTACTATCTCAGGCAAAGG
____________________________________________________________
consensus TTTCCTCGATATACTTTGGACGAAGCTGCTGCTGTTTGTCATTACTATCTCAGGCAAAGG
. : . : . : . : . : . :
rJMSF003K07+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
rJMFF028B22+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
rJMSF006J01+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
rJMFF001G01+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
rJMSF042O13+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
rJMFF022L09+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
rJMFF016F24+ CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
____________________________________________________________
consensus CTTATACGTCGAGAATCATTCTCAGAAGAAAACTGGAAGAAGATCTACTACCTGTCCAAT
. : . : . : . : . : . :
rJMSF003K07+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
rJMFF028B22+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
rJMSF006J01+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
rJMFF001G01+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
rJMSF042O13+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
rJMFF022L09+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
rJMFF016F24+ GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
____________________________________________________________
consensus GGAAATGGAGCAGAGCTGAGATGGCTGGTACCCTTCATGAGATGATGCTTCGAACATTAA
. : . : . : . : . : . :
rJMSF003K07+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
rJMFF028B22+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
rJMSF006J01+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
rJMFF001G01+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
rJMSF042O13+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
rJMFF022L09+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
rJMFF016F24+ AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
____________________________________________________________
consensus AATACAAGCAAATATTTAGTGTGATTCAAACACGGAAGAGGTTTGGTCTAACTATCAACT
. : . : . : . : . : . :
rJMSF003K07+ TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
rJMFF028B22+ TTTCATCAGCTTTGATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
rJMSF006J01+ TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
rJMFF001G01+ TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
rJMSF042O13+ TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
rJMFF022L09+ TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
rJMFF016F24+ TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
____________________________________________________________
consensus TTTCATCAGCTTTAATAAGGTTGTGCTGTTCTTTCAAGTACTTGATCTTTACATAGGAAT
. : . : . : . : . : . :
rJMSF003K07+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAACCATTGTAT
rJMFF028B22+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATTGTAT
rJMSF006J01+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATTGTAT
rJMFF001G01+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATTGTAT
rJMSF042O13+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATTGTAT
rJMFF022L09+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATTGTAT
rJMFF016F24+ TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATNGTAT
____________________________________________________________
consensus TGCCAAGGTTGGTAAAATTTTGTCCAGTCTGGTGATATTTACTCCCTTAAA-CATTGTAT
. : . : . : . : . : . :
rJMSF003K07+ TATCTTGAGGATG
rJMFF028B22+ TATCTTGAGGATGTGAATTAT
rJMSF006J01+ TATCT
rJMFF001G01+ TATCT
rJMSF042O13+ TATCTTGAGGATG
rJMFF022L09+ TATCTTGAGGATGTGAATTATTGAGTATTAATTACTAC
rJMFF016F24+ TATCTTGAGGATGTGAATTATTGAGTATTAATTACTACCTTAAAGCATTGTCACCCAACT
____________________________________________________________
consensus TATCTTGAGGATGTGAATTATTGAGTATTAATTACTACCTTAAAGCATTGTCACCCAACT