Contig 009668:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015L09Sequence658011511 (2)ref|XP_011087756.1|5e-121PREDICTED: lariat debranching enzyme [Sesamum indicum] ref|XP_011087765.1| PREDI740009668 (2)emb|CDP20997.1|3e-42unnamed protein product [Coffea canephora]
JMSF038F15Sequence679011511 (2)ref|XP_011087756.1|1e-129PREDICTED: lariat debranching enzyme [Sesamum indicum] ref|XP_011087765.1| PREDI885009668 (2)ref|XP_009786408.1|275PREDICTED: lariat debranching enzyme isoform X4 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038F15+ CTCCGTCAAAAACCTTTTTTCGAGCAAGAGATTCAA
                      ____________________________________________________________
consensus CTCCGTCAAAAACCTTTTTTCGAGCAAGAGATTCAA
 
. : . : . : . : . : . :
rJMSF038F15+ GAAGGAACTCTGGGAAGTAAACCTGCTGCAGAATTATTGGAGAAGTTGAGGCCATCCTAC
                      ____________________________________________________________
consensus GAAGGAACTCTGGGAAGTAAACCTGCTGCAGAATTATTGGAGAAGTTGAGGCCATCCTAC
 
. : . : . : . : . : . :
rJMSF038F15+ TGGTTTTCTGCTCATCTACACTGCAAATTTGCTGCTTTGGTTCAACATGGTGAGGGCTCC
                      ____________________________________________________________
consensus TGGTTTTCTGCTCATCTACACTGCAAATTTGCTGCTTTGGTTCAACATGGTGAGGGCTCC
 
. : . : . : . : . : . :
rJMSF038F15+ GTCACCAAATTTCTTGCTCTTGATAAATGCCTCCCTGGTCGGAACTTTTTGCAAGTTATT
rJMFF015L09+ GGAACTTTTTGCAAGTTATT
                      ____________________________________________________________
consensus GTCACCAAATTTCTTGCTCTTGATAAATGCCTCCCTGGTCGGAACTTTTTGCAAGTTATT
 
. : . : . : . : . : . :
rJMSF038F15+ GAAGTTGAGTCAGAGCCAGGACCATATGAACTCCAGTATGATGAAGAATGGCTAGCAATT
rJMFF015L09+ GAAGTTGAGTCAGAGCCAGGACCATATGAACTCCAGTATGATGAAGAATGGCTAGCAATT
                      ____________________________________________________________
consensus GAAGTTGAGTCAGAGCCAGGACCATATGAACTCCAGTATGATGAAGAATGGCTAGCAATT
 
. : . : . : . : . : . :
rJMSF038F15+ ATGAGGAAGTTTAACTCTATCTTACCTCTGACAATTAGGCATGCAGATTATAGCAATGTA
rJMFF015L09+ ATGAGGAAGTTTAACTCTATCTTACCTCTGACAATTAGGCATGCAGATTATAGCAATGTA
                      ____________________________________________________________
consensus ATGAGGAAGTTTAACTCTATCTTACCTCTGACAATTAGGCATGCAGATTATAGCAATGTA
 
. : . : . : . : . : . :
rJMSF038F15+ CAGCTTGACCTGCAAGAATGCCGTCATTTTGTAAGGAATAAACTTCAATCAAGAGGGGCC
rJMFF015L09+ CAGCTTGACCTGCAAGAATGCCGTCATTTTGTAAGGAATAAACTTCAATCAAGAGGGGCC
                      ____________________________________________________________
consensus CAGCTTGACCTGCAAGAATGCCGTCATTTTGTAAGGAATAAACTTCAATCAAGAGGGGCC
 
. : . : . : . : . : . :
rJMSF038F15+ AAACCTTTTGATTTTGTGCGCACTGTGCCATGCCACGATCCTCGTCAACCTCTTGCTAAT
rJMFF015L09+ AAACCTTTTGATTTTGTGCGCACTGTGCCATGCCACGATCCTCGTCAACCTCTTGCTAAT
                      ____________________________________________________________
consensus AAACCTTTTGATTTTGTGCGCACTGTGCCATGCCACGATCCTCGTCAACCTCTTGCTAAT
 
. : . : . : . : . : . :
rJMSF038F15+ GGTGTCTTTTCTGGTCACTGCCGAAATCCCCAAACAGAAGCCTTATTACAGCTCCTTGAA
rJMFF015L09+ GGTGTCTTTTCTGGTCACTGCCGAAATCCCCAAACAGAAGCCTTATTACAGCTCCTTGAA
                      ____________________________________________________________
consensus GGTGTCTTTTCTGGTCACTGCCGAAATCCCCAAACAGAAGCCTTATTACAGCTCCTTGAA
 
. : . : . : . : . : . :
rJMSF038F15+ CTTGAATATCTTCTTGATAACATGTCAGAATCAAGGGAGTTTTCTGGAAGTCCAGCTTCA
rJMFF015L09+ CTTGAATATCTTCTTGATAACATGTCAGAATCAAGGGAGTTTTCTGGAAGTCCAGCTTCA
                      ____________________________________________________________
consensus CTTGAATATCTTCTTGATAACATGTCAGAATCAAGGGAGTTTTCTGGAAGTCCAGCTTCA
 
. : . : . : . : . : . :
rJMSF038F15+ TTTATTTCTAGTTCGTTTGGCTATGGTACTGAAGATATCCCCATTGATGATGTGGATGAT
rJMFF015L09+ TTTATTTCTAGTTCGTTTGGCTATGGTACTGAAGATATCCCCATTGATGATGTGGATGAT
                      ____________________________________________________________
consensus TTTATTTCTAGTTCGTTTGGCTATGGTACTGAAGATATCCCCATTGATGATGTGGATGAT
 
. : . : . : . : . : . :
rJMSF038F15+ ATTGATGAACCAAAAGAGGCTGATGCCAGTGAAACTGAAAATGAACAAATATAGAACTTG
rJMFF015L09+ ATTGATGAACCAAAAGAGGCTGATGCCAGTGAAACTGAAAATGAACAAATATAGAACTTG
                      ____________________________________________________________
consensus ATTGATGAACCAAAAGAGGCTGATGCCAGTGAAACTGAAAATGAACAAATATAGAACTTG
 
. : . : . : . : . : . :
rJMSF038F15+ TTTATTGGTAATCCAGCTGCAATGGAAGTTCAACCAGAAGAATGTATTGTTTGTAATATG
rJMFF015L09+ TTTATTGGTAATCCAGCTGCAATGGAAGTTCAACCAGAAGAATGTATTGTTTGTAATATG
                      ____________________________________________________________
consensus TTTATTGGTAATCCAGCTGCAATGGAAGTTCAACCAGAAGAATGTATTGTTTGTAATATG
 
. : . : . : . : . : . :
rJMSF038F15+ ATTGTAGTACTTAGATTGGTTACTAGTCTAAAATTCAGGAACTCACCTGTCACATTGATT
rJMFF015L09+ ATTGTAGTACTTAGATTGGTTACTAGTCTAAAATTCAGGAACTCACCTGTCACATTGATT
                      ____________________________________________________________
consensus ATTGTAGTACTTAGATTGGTTACTAGTCTAAAATTCAGGAACTCACCTGTCACATTGATT
 
. : . : . : . : . : . :
rJMSF038F15+ GAATACCTATTGCAGCAGCAATAGTAGGTAGAATGCAAAGGCTGAGTATGCTCTGTAAAG
rJMFF015L09+ GAATACCTATTGCAGCAGCAATAGTAGGTAGAATGCAAAGGCTGAGTATGCTCTGTAAAG
                      ____________________________________________________________
consensus GAATACCTATTGCAGCAGCAATAGTAGGTAGAATGCAAAGGCTGAGTATGCTCTGTAAAG
 
. : . : . : . : . : . :
rJMSF038F15+ AGGAGTATC
rJMFF015L09+ AGGAGTATCGTAGCAGTATAATCAGAACCACCATTACAATTTATTCAATAGACACAGATT
                      ____________________________________________________________
consensus AGGAGTATCGTAGCAGTATAATCAGAACCACCATTACAATTTATTCAATAGACACAGATT