Contig 009656:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013F08Sequence579005930 (14)ref|XP_007202636.1|1e-99hypothetical protein PRUPE_ppa012070mg [Prunus persica] gb|EMJ03835.1| hypotheti293009656 (3)
JMFF019J15Sequence523005930 (14)ref|XP_007202636.1|2e-87hypothetical protein PRUPE_ppa012070mg [Prunus persica] gb|EMJ03835.1| hypotheti283009656 (3)
JMSF009I17Sequence372005930 (14)ref|NP_001189724.1|9e-09calmodulin 2 [Arabidopsis thaliana] gb|AEC09933.1| calmodulin 2 [Arabidopsis tha311009656 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009I17+ TGNGGNATTTGTCNAGGNCCNGNTGGCCNAGGGNGNAC
                      ____________________________________________________________
consensus TGNGGNATTTGTCNAGGNCCNGNTGGCCNAGGGNGNAC
 
. : . : . : . : . : . :
rJMSF009I17+ CTGNTCNATCCCGAANTTNATNTTTNGAATTTAAAAAAAAAAAAAATCAAAACCAAAAAA
rJMFF019J15+ AAAAAAAAAAAAATCAAAACCAAAAAA
rJMFF013F08+ AAAAAAAAAAAAATCAAAACCAAAAAA
                      ____________________________________________________________
consensus CTGNTCNATCCCGAANTTNATNTTTNGAATTTAAAAAAAAAAAAAATCAAAACCAAAAAA
 
. : . : . : . : . : . :
rJMSF009I17+ ACAAAAAACAAAAAAATGAAAAAGGAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
rJMFF019J15+ ACAAAAAACAAAAAAATGAAAAAGAAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
rJMFF013F08+ ACAAAAAACAAAAAAATGAAAAAGAAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
                      ____________________________________________________________
consensus ACAAAAAACAAAAAAATGAAAAAGAAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
 
. : . : . : . : . : . :
rJMSF009I17+ TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
rJMFF019J15+ TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
rJMFF013F08+ TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
                      ____________________________________________________________
consensus TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
 
. : . : . : . : . : . :
rJMSF009I17+ ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
rJMFF019J15+ ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
rJMFF013F08+ ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
                      ____________________________________________________________
consensus ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
 
. : . : . : . : . : . :
rJMSF009I17+ CGGGTTGTACTCACTTCTGGTACTT
rJMFF019J15+ CGGGTTGTACTCACTTCTGGTACTTTCTTCCCCTTTGACCCTATCAT
rJMFF013F08+ CGGGTTGTACTCACTTCTGGTACTTTCTTCCCCTTTGAACCTATCATTTATGCACTTCTG
                      ____________________________________________________________
consensus CGGGTTGTACTCACTTCTGGTACTTTCTTCCCCTTTGACCCTATCATTTATGCACTTCTG