Contig 009651:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K19Sequence507007324 (8)ref|XP_007225494.1|8e-41hypothetical protein PRUPE_ppa000919mg [Prunus persica] gb|EMJ26693.1| hypotheti803009651 (6)ref|XP_009778545.1|8e-56PREDICTED: nucleolar protein 14, partial [Nicotiana sylvestris]
JMSF026A14Sequence677007324 (8)ref|XP_007045792.1|2e-48Nop14, putative isoform 2 [Theobroma cacao] gb|EOY01624.1| Nop14, putative isofo753009651 (6)emb|CAN71711.1|2e-42hypothetical protein VITISV_013458 [Vitis vinifera]
JMSF034G17Sequence683007324 (8)ref|XP_007045791.1|1e-50Nop14, putative isoform 1 [Theobroma cacao] gb|EOY01623.1| Nop14, putative isofo763009651 (6)emb|CAN71711.1|6e-46hypothetical protein VITISV_013458 [Vitis vinifera]
JMSF035D19Sequence667007324 (8)ref|XP_007225494.1|8e-41hypothetical protein PRUPE_ppa000919mg [Prunus persica] gb|EMJ26693.1| hypotheti772009651 (6)ref|XP_009778545.1|5e-51PREDICTED: nucleolar protein 14, partial [Nicotiana sylvestris]
JMSF041K02Sequence526007324 (8)emb|CDP00465.1|3e-40unnamed protein product [Coffea canephora]591009651 (6)emb|CAN71711.1|4e-13hypothetical protein VITISV_013458 [Vitis vinifera]
JMSF044C23Sequence721007324 (8)ref|XP_007045791.1|1e-58Nop14, putative isoform 1 [Theobroma cacao] gb|EOY01623.1| Nop14, putative isofo746009651 (6)ref|XP_009778545.1|4e-50PREDICTED: nucleolar protein 14, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF035D19+                                                                    AT
rJMSF034G17+                                                                    AT
rJMFF012K19+                                           TTCATGCCAATCTTAAAGCTTTTGAAT
                      ____________________________________________________________
consensus                                              TTCATGCCAATCTTAAAGCTTTTGAAT
 
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rJMSF035D19+          GAACTGGCAGCACAGAATCATATGCCAGACATATTACAGGAGAAAATCAAGAATGTTATC
rJMSF044C23+                    CACAGAATCATATGCCAGACATATTACAGGAGAAAATCAAGAATGTTATC
rJMSF034G17+          GAACTGGCAGCACAGAATCATATGCCAGACAT-TTACNGGAGAAAATCAAGAATGTTATC
rJMSF026A14+                    CACAGAATCATATGCCAGACATATTACAGGAGAAAATCAAGAATGTTATC
rJMFF012K19+          GAACTGGCAGCACAGAATCATATGCCAGACATATTACAGGAGAAAATCAAGAATGTTATC
                      ____________________________________________________________
consensus             GAACTGGCAGCACAGAATCATATGCCAGACATATTACAGGAGAAAATCAAGAATGTTATC
 
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rJMSF035D19+          CAACTAA-TTGAAAACCAAGTTGAGGAAAATCACAGGCTGCGTCAACCTCTAAGAATGAG
rJMSF044C23+          CAACTAA-TTGAAAACAAAGTTGAGGAAAATCACAGGCTGCGTCAACCTCTAAGAATGAG
rJMSF034G17+          CAACTAA-TTGAAAACAAAGTTGAGGAAAATCACAGGCTGCGTCAACCTCTAAGAATGAG
rJMSF026A14+          CAACTAATTTGAAAACAAAGTTGAGGAAAATCACAGGCTGCGTCAACCTCTAAGAATGAG
rJMFF012K19+          CAACTAA-TTGAAAACAAAGTTGAGGAAAATCACAGGCTGCGTCAACCTCTAAGAATGAG
                      ____________________________________________________________
consensus             CAACTAA-TTGAAAACAAAGTTGAGGAAAATCACAGGCTGCGTCAACCTCTAAGAATGAG
 
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rJMSF035D19+          GAAGCAAAAGCCTGTGCCTATCAAGATGGTTAATCCCAAATTTGAAGACAACTTTATTAA
rJMSF044C23+          GAAGCAAAAGCCTGTGCCTATCAAGATGGTTAATCCCAAATTTGAAGACAACTTTATTAA
rJMSF041K02+                                                                     A
rJMSF034G17+          GAAGCAAAAGCCTGTGCCTATCAAGATGGTTAATCCCAAATTTGAAGACAACTTTATTAA
rJMSF026A14+          GAAGCAAAAGCCTGTGCCTATCAAGATGGTTAATCCCAAATTTGAAGACAACTTTATTAA
rJMFF012K19+          GAAGCAAAAGCCTGTGCCTATCAAGATGGTTAATCCCAAATTTGAAGACAACTTTATTAA
                      ____________________________________________________________
consensus             GAAGCAAAAGCCTGTGCCTATCAAGATGGTTAATCCCAAATTTGAAGACAACTTTATTAA
 
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rJMSF035D19+          GGGTAGAGATTATGACCCAGATCGTGAACGGGCTGAGATAAGGAAGTTAAAGAAACGCGT
rJMSF044C23+          GGGTAGAGATTATGACCCAGATCGTGAACGGGCTGAGATAAGGAAGTTAAAGAAACGCGT
rJMSF041K02+          GGGTAGAGATTANGACCCAGNTCGTGAACGGGCTGNGATAAGGAAGTTAAAGAANCGNGT
rJMSF034G17+          GGGTAGAGATTATGACCCAGATCGTGAACGGGCTGAGATAAGGAAGTTAAAGAAACGCGT
rJMSF026A14+          GGGTAGAGATTATGACCCAGATCGTGAACGGGCTGAGATAAGGAAGTTAAAGAAACGCGT
rJMFF012K19+          GGGTAGAGATTATGACCCAGATCGTGAACGGGCTGAGATAAGGAAGTTAAAGAAACGCGT
                      ____________________________________________________________
consensus             GGGTAGAGATTATGACCCAGATCGTGAACGGGCTGAGATAAGGAAGTTAAAGAAACGCGT
 
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rJMSF035D19+          AAAACAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTAAAGATAATCATTTCTTGTTTGG
rJMSF044C23+          AAAACAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTAAAGATAATCATTTCTTGTTTGG
rJMSF041K02+          AAANCAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTNANGATANTCANTTCTTGTNTGG
rJMSF034G17+          AAAACAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTAAAGATAATCATTTCTTGTTTGG
rJMSF026A14+          AAAACAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTAAAGATAATCATTTCTTGTTTGG
rJMFF012K19+          AAAACAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTAAAGATAATCATTTCTTGTTTGG
                      ____________________________________________________________
consensus             AAAACAGGAAGCGAAAGGAGCTGCTCGTGAAATTCGTAAAGATAATCATTTCTTGTTTGG
 
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rJMSF035D19+          GGTGAAGGAGAAGGAGAAAGCAGCTCTAGCAGAAGAAAGGTCTGAAAAGTATGGGAAAGC
rJMSF044C23+          GGTGAAGGAGAAGGAGAAAGCAGCTCTAGCAGAAGAAAGGTCTGAAAAGTATGGGAAAGC
rJMSF041K02+          GGCGANGGAGAAGGAGAAAGCAGCTNTAGCAGANGAAAGGTCTGAAANGTATGGNANAGC
rJMSF034G17+          GGTGAAGGAGAAGGAGAAAGCAGCTCTAGCAGAAGAAAGGTCTGAAAAGTATGGGAAAGC
rJMSF026A14+          GGTGAAGGAGAAGGAGAAAGCAGCTCTAGCAGAAGAAAGGTCTGAAAAGTATGGGAAAGC
rJMFF012K19+          GGTGAAGGAGAAGGAGAAAGCAGCTCTAGCAGAAGAAAGGTCTGAAAAGTATGGGAAAGC
                      ____________________________________________________________
consensus             GGTGAAGGAGAAGGAGAAAGCAGCTCTAGCAGAAGAAAGGTCTGAAAAGTATGGGAAAGC
 
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rJMSF035D19+          GCTTGCTTTTCTTCAAGAACAAGAGCACGCATTTAAATCTGGGCAATTGGGAGGAAACAG
rJMSF044C23+          GCTTGCTTTTCTTCAAGAACAAGAGCACGCATTTAAATCTGGGCAATTGGGAGGAAACAG
rJMSF041K02+          GCCTGCTTTTCTTCAAGANCNAGAGCNCGCATTNANATCNGGGCNATTGGGAGGAAACAG
rJMSF034G17+          GCTTGCTTTTCTTCAAGAACAAGAGCACGCATTTAAATCTGGGCAATTGGGAGGAAACAG
rJMSF026A14+          GCTTGCTTTTCTTCAAGAACAAGAGCACGCATTTAAATCTGGGCAATTGGGAGGAAACAG
rJMFF012K19+          GCTTGCTTTTCTTCAAGAACAAGAGCACGCATTTAAATCTGGGCAATTGGGAGGAAACAG
                      ____________________________________________________________
consensus             GCTTGCTTTTCTTCAAGAACAAGAGCACGCATTTAAATCTGGGCAATTGGGAGGAAACAG
 
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rJMSF035D19+          GAAGAGAAGAAGATGAAGAAATTCAACTCACAGTTTCATTCTGGCCTGGATTACTTGAAA
rJMSF044C23+          GAAGAGAAGAAGATGAAGAAATTCAACTCACAGTTTCATTCTGGCCTGGATTACTTGAAA
rJMSF041K02+          GAAGAGAAGAAGANGAAGAAATTCAACTCACNGTTTCATTCTGGCNTGGNTTACTTGAAA
rJMSF034G17+          GAAGAGAAGAAGATGAAGAAATTCAACTCACAGTTTCATTCTGGCCTGGATTACTTGAAA
rJMSF026A14+          GAAGAGAAGAAGATGAAGAAATTCAACTCACAGTTTCATTCTGGCCTGGATTACTTGAAA
rJMFF012K19+          GAAGAGAAGAAGATGAAGAAATTCAACTCACAGTTTCATTCTGGCCTGGATTACTTGAAA
                      ____________________________________________________________
consensus             GAAGAGAAGAAGATGAAGAAATTCAACTCACAGTTTCATTCTGGCCTGGATTACTTGAAA
 
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rJMSF035D19+          ATTCTGGTGAGTATATCTGCACTTTATTATACTCCTTGCTGATACCATACGGAGAAGATA
rJMSF044C23+          ATTCTGGTGAGTATATCTGCACTTTATTATACTCCTTGCTGATACCATACGGAGAAGATA
rJMSF041K02+          ATTCTGGTGAGTATATCNNCACTTTNTTATACTCCTNGCTGNNACCATGCGGAGAAGNTA
rJMSF034G17+          ATTCTGGTGAGTATATCTGCACTTTATTATACTCCTTGCTGATACCATACGGAGAAGATA
rJMSF026A14+          ATTCTGGTGAGTATATCTGCACTTTATTATACTCCTTGCTGATACCATACGGAGAAGATA
rJMFF012K19+          ATTCTGGTGAGTATATCTGCACTTTATTATACTCCTTGCTGATACCATACGGAGAAGATA
                      ____________________________________________________________
consensus             ATTCTGGTGAGTATATCTGCACTTTATTATACTCCTTGCTGATACCATACGGAGAAGATA
 
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rJMSF035D19+          ACACTGATTCCATGCTTTAATTTGCCCTTTCACAATCCATTCATGTGAGAGGTATGAAGT
rJMSF044C23+          ACACTGATTCCATGCTTTAATTTGCCCTTTCACAATCCATTCATGTGAGAGGTATGAAGT
rJMSF041K02+          ACNCTGATNCCATGCTTTACTTTGCCCTTTCNCAATCCATTCANGTGAGAGGTANNAAGT
rJMSF034G17+          ACACTGATTCCATGCTTTAATTTGCCCTTTCACAATCCATTCATGTGAGAGGTATGAAGT
rJMSF026A14+          ACACTGATTCCATGCTTTAATTTGCCCTTTCACAATCCATTCATGTGAGAGGTATGAAGT
rJMFF012K19+          ACACTGATTCCATGCTTTAATTTGCCCTTTCACAATCCATTCATGTGAGAGGTATGAAGT
                      ____________________________________________________________
consensus             ACACTGATTCCATGCTTTAATTTGCCCTTTCACAATCCATTCATGTGAGAGGTATGAAGT
 
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rJMSF035D19+          TCAACTAGCTTAACTGTACTAGTGCAGCTGAATCTGTATGTGTTGCACTTTTTATTTGTA
rJMSF044C23+          TCAACTAGCTTAACTGTACTAGTGCAGCTGAATCTGTATGTGTTGCACTTTTTATTTGTA
rJMSF041K02+          TCAACTAGCTTATCTGTACTAGTGCAGCTGNNTCCGTATGTGTTGCNCCTTNTATTTGTA
rJMSF034G17+          TCAACTAGCTTAACTGTACTAGTGCAGCTGAATCTGTATGTGTTGCACTTTTTATTTGTA
rJMSF026A14+          TCAACTAGCTTAACTGTACTAGTGCAGCTGAATCTGTATGTGTTGCACTTTTTATTTGTA
rJMFF012K19+          TCAACTAGCTTAACTGTACTAGTGCAGCTGAATCTGTATGTGTTGCACTTTTTATTTGTA
                      ____________________________________________________________
consensus             TCAACTAGCTTAACTGTACTAGTGCAGCTGAATCTGTATGTGTTGCACTTTTTATTTGTA
 
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rJMSF035D19+          GTAG--TAGTGTATTA-GTTATCAAGAAATCAAGAATCAAGAACACCATATATACAAGAG
rJMSF044C23+          GTAG--TAGTGTATTA-GTTATCAAGAAATCAAGAATCAAGAACACCATATATACAAGAG
rJMSF041K02+          GTAGCTCAGTGTNTTACGTTATCANGAAATCAAGAATCAAGAACACCATATATACAAGCG
rJMSF034G17+          GTAG--TAGTGTATTA-GTTATCAAGAAATCAAGAATCAAGAACACCATATATACAAGAG
rJMSF026A14+          GTAG--TAGTGTATTA-GTTATCAAGAAATCAAGAATCAAGAACACCATATATACAAGAG
rJMFF012K19+          GTAG--TAGTGTATTA-GTTATCAAGAAATCAAGAATCAAGAACACCATATATACAAGAG
                      ____________________________________________________________
consensus             GTAG--TAGTGTATTA-GTTATCAAGAAATCAAGAATCAAGAACACCATATATACAAGAG
 
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rJMSF035D19+          TGGAGTTGAGGGAAAGTATAAAAATTCATGTAAAGTGTT                     
rJMSF044C23+          TGGAGTTGAGGGAAAGTATAAAAATTCATGTAAAGTGTT                     
rJMSF041K02+          TGGAGTTGAGGGAAAGTATAAAAATT                                  
rJMSF034G17+          TGGAGTTGAGGGAAAGTATAAAAATTCATGTAAAGTGTT                     
rJMSF026A14+          TGGAGTTGAGGGAAAGTATAAAAATTCATGTAAAGTGTT                     
rJMFF012K19+          TGGAGTTGAGGGAAAGTATAAAAATTCATGTAAAGTGTTTGAATGTTTGGGCCACAAAAT
                      ____________________________________________________________
consensus             TGGAGTTGAGGGAAAGTATAAAAATTCATGTAAAGTGTTTGAATGTTTGGGCCACAAAAT