Contig 009648:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A15Sequence531009648 (2)ref|XP_004232478.1|5e-67PREDICTED: peptide methionine sulfoxide reductase A5 [Solanum lycopersicum] gb|728009648 (2)ref|XP_004232478.1|2e-113PREDICTED: peptide methionine sulfoxide reductase A5 [Solanum lycopersicum] gb|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF012A15- ACGTGTGAAGAATAGCACAGGATCAATTCTCAGAAC
                      ____________________________________________________________
consensus ACGTGTGAAGAATAGCACAGGATCAATTCTCAGAAC
 
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JMFF012A15- TTATTTGTTTTCCGGCAAGTCCGCCTTCTCCGGCCGGTTTCCGTTCCGCTGTTCTATTCC
                      ____________________________________________________________
consensus TTATTTGTTTTCCGGCAAGTCCGCCTTCTCCGGCCGGTTTCCGTTCCGCTGTTCTATTCC
 
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JMFF012A15- CCAATGAAGGTCGCTGGAAGATTTGCATTTCTCTCCTCCGTTACAAGTAATTTCCTTTTC
                      ____________________________________________________________
consensus CCAATGAAGGTCGCTGGAAGATTTGCATTTCTCTCCTCCGTTACAAGTAATTTCCTTTTC
 
. : . : . : . : . : . :
JMFF012A15- CTAACTGTTTTATTGTTCACAAGTCCAACTGTAAGCATCAGGTTATCGGATCGGACCCTC
                      ____________________________________________________________
consensus CTAACTGTTTTATTGTTCACAAGTCCAACTGTAAGCATCAGGTTATCGGATCGGACCCTC
 
. : . : . : . : . : . :
JMFF012A15- GAGTCTCCGGCGGATCCGTTCAATCGCCCCTTGAAAACAGCGGTTTTTGCTCTGGGAAGC
rJMFF012A15+ TGGGAAGC
                      ____________________________________________________________
consensus GAGTCTCCGGCGGATCCGTTCAATCGCCCCTTGAAAACAGCGGTTTTTGCTCTGGGAAGC
 
. : . : . : . : . : . :
JMFF012A15- TTTTGGAGGTCCGAGGCGGTGTTTGGTTGCTTAGACGGCGTCGTCAGAACTACCGCCGGC
rJMFF012A15+ TTTTGGAGGTCCGAGGCGGTGTTTGGTTGCTTAGACGGCGTCGTCAGAACTACCGCCGGC
                      ____________________________________________________________
consensus TTTTGGAGGTCCGAGGCGGTGTTTGGTTGCTTAGACGGCGTCGTCAGAACTACCGCCGGC
 
. : . : . : . : . : . :
JMFF012A15- TATGCCGGAGGGTCCAGGAGCAACCCCGAGTACCGCAACTTGGGCGACCACGCCGAGTGT
rJMFF012A15+ TATGCCGGAGGGTCCAGGAGCAACCCCGAGTACCGCAACTTGGGCGACCACGCCGAGTGT
                      ____________________________________________________________
consensus TATGCCGGAGGGTCCAGGAGCAACCCCGAGTACCGCAACTTGGGCGACCACGCCGAGTGT
 
. : . : . : . : . : . :
JMFF012A15- GTGCAGATTGAGTACGATCCTGGATTGGTTAGTTTTANACAACTGCTGGAGGTCTTCTGG
rJMFF012A15+ GTGCAGATTGAGTACGATCCTGGATTGGTTAGTTTTAGACAACTGCTGGAGGTCTTCTGG
                      ____________________________________________________________
consensus GTGCAGATTGAGTACGATCCTGGATTGGTTAGTTTTAGACAACTGCTGGAGGTCTTCTGG
 
. : . : . : . : . : . :
JMFF012A15- TCAAGCCACGATTCTAGGCAAGTCTTCGGGCAAGGCCCTGATGTGGGTAACCAGTACAGG
rJMFF012A15+ TCAAGCCACGATTCTAGGCAAGTCTTCGGGCAAGGCCCTGATGTGGGTAACCAGTACAGG
                      ____________________________________________________________
consensus TCAAGCCACGATTCTAGGCAAGTCTTCGGGCAAGGCCCTGATGTGGGTAACCAGTACAGG
 
. : . : . : . : . : . :
JMFF012A15- TCTATCATATTCACA
rJMFF012A15+ TCTATCATATTCACAAATGCAACCGAGGAGGCCAGATTGGCTGGGGTCAGCAAAGAACGA
                      ____________________________________________________________
consensus TCTATCATATTCACAAATGCAACCGAGGAGGCCAGATTGGCTGGGGTCAGCAAAGAACGA
 
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rJMFF012A15+ GAGCAATCAAGGTCCAGGAGCAGCATTGTCACTACTCAAATTCAACAGCTAGAAACATTT
                      ____________________________________________________________
consensus GAGCAATCAAGGTCCAGGAGCAGCATTGTCACTACTCAAATTCAACAGCTAGAAACATTT
 
. : . : . : . : . : . :
rJMFF012A15+ TACCCTGCAGAGCCTGAACATCAGAAATTTGAGCTGAAACGGAATCCATTCCTTCTTCAG
                      ____________________________________________________________
consensus TACCCTGCAGAGCCTGAACATCAGAAATTTGAGCTGAAACGGAATCCATTCCTTCTTCAG
 
. : . : . : . : . : . :
rJMFF012A15+ TTGATGGGGAACATGCCCGAGGAAGAGCTAGAGACATCAACAATGGCAGCAAAACTAAAT
                      ____________________________________________________________
consensus TTGATGGGGAACATGCCCGAGGAAGAGCTAGAGACATCAACAATGGCAGCAAAACTAAAT
 
. : . : . : . : . : . :
rJMFF012A15+ GGCTATGCAGCAGAACTTTGCCCTCCAAGGATCCAAAAGCAGATTGATGCAAAGATTAAT
                      ____________________________________________________________
consensus GGCTATGCAGCAGAACTTTGCCCTCCAAGGATCCAAAAGCAGATTGATGCAAAGATTAAT
 
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rJMFF012A15+ GATATCATCAAGAAAGGCTGGCCTGTTTTGAAAGACATATAGCCCCCAGACATTGACCAA
                      ____________________________________________________________
consensus GATATCATCAAGAAAGGCTGGCCTGTTTTGAAAGACATATAGCCCCCAGACATTGACCAA
 
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rJMFF012A15+ GGTTTATACCATGTTGTGGGTGAAGGATAGATAATATGATTAAGCTTTGAATTCTTAAAA
                      ____________________________________________________________
consensus GGTTTATACCATGTTGTGGGTGAAGGATAGATAATATGATTAAGCTTTGAATTCTTAAAA
 
. : . : . : . : . : . :
rJMFF012A15+ GGAAGGTGACCATGTTTTTGAAGTGATTATCACAATATCTTGAAAAACACATTATTCAGT
                      ____________________________________________________________
consensus GGAAGGTGACCATGTTTTTGAAGTGATTATCACAATATCTTGAAAAACACATTATTCAGT