Contig 009601:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003D07Sequence562003053 (6)ref|XP_004236872.1|135PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum]342009601 (3)
JMSF016H10Sequence614003053 (6)ref|XP_004236872.1|140PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum]287009601 (3)
JMSF041L24Sequence688021149ref|XP_004236872.1|79.3PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum]187009601 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016H10+ CGNGGAAGNGAAGAAGGCG
                      ____________________________________________________________
consensus CGNGGAAGNGAAGAAGGCG
 
. : . : . : . : . : . :
rJMSF016H10+ GTTNTCNNGGNTTAACCTTNTGTTTACNTGAATNTNGTANGTCNGCCNNAATTNTTTTTG
                      ____________________________________________________________
consensus GTTNTCNNGGNTTAACCTTNTGTTTACNTGAATNTNGTANGTCNGCCNNAATTNTTTTTG
 
. : . : . : . : . : . :
rJMSF016H10+ CTTTTNTCCGATCCGGGGNTATAGGNCTNGNCGNTGTCTCTTTTTTTTTTTTTCTTTCTG
rJMSF041L24+ TTTTTTTTTTTTTCTG
rJMFF003D07+ TTTTTTTTTTTTTTTTTCTG
                      ____________________________________________________________
consensus CTTTTNTCCGATCCGGGGNTATAGGNCTNGNCGNTGTCTCTTTTTTTTTTTTTTTTTCTG
 
. : . : . : . : . : . :
rJMSF016H10+ GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
rJMSF041L24+ GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
rJMFF003D07+ GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
                      ____________________________________________________________
consensus GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
 
. : . : . : . : . : . :
rJMSF016H10+ ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTATTAGAAT
rJMSF041L24+ ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTAT
rJMFF003D07+ ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTATTAGAAT
                      ____________________________________________________________
consensus ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTATTAGAAT
 
. : . : . : . : . : . :
rJMSF016H10+ TATCAAGTGGAAGTATATGCACTGAATT
rJMFF003D07+ TATCAAGTGGAAGTATATGCACTGAATTTATACCATGTCAAAACAAGTTCTGCTTAGCTA
                      ____________________________________________________________
consensus TATCAAGTGGAAGTATATGCACTGAATTTATACCATGTCAAAACAAGTTCTGCTTAGCTA
 
. : . : . : . : . : . :
rJMFF003D07+ CAGCCAATTGTTATTGTCAGTGGTCCAAGGACCTTGCATTTGCATTGATGCATTCAGTTA
                      ____________________________________________________________
consensus CAGCCAATTGTTATTGTCAGTGGTCCAAGGACCTTGCATTTGCATTGATGCATTCAGTTA