Contig 009581:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS095F09Sequence609009581 (3)ref|XP_006362577.1|1e-08PREDICTED: serine/threonine-protein kinase PRP4 homolog [Solanum tuberosum]
JMSF051G22Sequence634009581 (3)ref|XP_006362577.1|2e-09PREDICTED: serine/threonine-protein kinase PRP4 homolog [Solanum tuberosum]738009581 (3)ref|XP_009617353.1|2e-14PREDICTED: serine/threonine-protein kinase prpf4B isoform X2 [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051G22- TCTTCCCTCTCCCTGTCTCTATTTTTTGTTCGATCC
                      ____________________________________________________________
consensus TCTTCCCTCTCCCTGTCTCTATTTTTTGTTCGATCC
 
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rJMSF051G22- CTATCAATCTCTCGGCTTCCTTCCCTATACCTTTCAGCAGTCTCATGACTATGAAACCTG
                      ____________________________________________________________
consensus CTATCAATCTCTCGGCTTCCTTCCCTATACCTTTCAGCAGTCTCATGACTATGAAACCTG
 
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rJMSF051G22- TCATCTTGGCTACTATATCTGCTACGACTAGAACTGCGCTCTCTTTCTTTTTCCTTCAAA
                      ____________________________________________________________
consensus TCATCTTGGCTACTATATCTGCTACGACTAGAACTGCGCTCTCTTTCTTTTTCCTTCAAA
 
. : . : . : . : . : . :
rJMSF051G22- AAACCTTGGCTGCCATGGCAATAGTCTCTGATGAGTCCAGTCACTCTTTCATAATCCTTA
                      ____________________________________________________________
consensus AAACCTTGGCTGCCATGGCAATAGTCTCTGATGAGTCCAGTCACTCTTTCATAATCCTTA
 
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rJMSF051G22- TCACCCTTATATTTCCTATCCTTATAAAATACACCCTCTGGCTTATGAAACACTTCTGAA
                      ____________________________________________________________
consensus TCACCCTTATATTTCCTATCCTTATAAAATACACCCTCTGGCTTATGAAACACTTCTGAA
 
. : . : . : . : . : . :
rJMSF051G22- ATAGAAACCTCCTCAGAAGTGCTTTGAGATTGTGGCAATCCTCTAGACCGATCAGGTGAC
                      ____________________________________________________________
consensus ATAGAAACCTCCTCAGAAGTGCTTTGAGATTGTGGCAATCCTCTAGACCGATCAGGTGAC
 
. : . : . : . : . : . :
rJMSF051G22- TTTGAATCCTTCCCATAAGGACCCTCATCTTCATATCCATCACGAGGTAATGCAACCTTG
                      ____________________________________________________________
consensus TTTGAATCCTTCCCATAAGGACCCTCATCTTCATATCCATCACGAGGTAATGCAACCTTG
 
. : . : . : . : . : . :
rJMSF051G22- GCAGTCTTGCGTCTCTTCCCAGCATTGTCAGGTGTCAAAGATCTTTTCCTGTCCTTTAAA
JMFS095F09+ ATCTTTTCCTGTCCTTTAAA
                      ____________________________________________________________
consensus GCAGTCTTGCGTCTCTTCCCAGCATTGTCAGGTGTCAAAGATCTTTTCCTGTCCTTTAAA
 
. : . : . : . : . : . :
rJMSF051G22- TCATTTCTATCACCATAGTAATGCTTCTGTGTCCTACTTTCTTCAATAGGAGAACATTTT
JMFS095F09+ TCATTTCTATCACCATAGTAATGCTTCTGTGTCCTACTTTCTTCAATAGGAGAACATTTT
                      ____________________________________________________________
consensus TCATTTCTATCACCATAGTAATGCTTCTGTGTCCTACTTTCTTCAATAGGAGAACATTTT
 
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rJMSF051G22- CCCTCATGTTTGTGGCGCTCACCGACTAAGTTCCCATTGGCAAGATATTTTTCACT-AAA
JMFS095F09+ CCCTCATGTTTGTGGCGCTCACCGACTAAGTTCCCATTGGCAAGATATTTTTCACTAAAA
JMSF051G22+ CTAAGTTCCCATTGGCAAGATATTTTTCACT-AAA
                      ____________________________________________________________
consensus CCCTCATGTTTGTGGCGCTCACCGACTAAGTTCCCATTGGCAAGATATTTTTCACT-AAA
 
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rJMSF051G22- ATTCCTTCCCAACTCAACCCCTCATGATTCTTACTTCTGTCAGCTTCTTCCACTTTCTTT
JMFS095F09+ ATTCCTTCCCAACTCAACCCCTCATGATTCTTACTTCTGTCAGCTTCTTCCACTTTCTTT
JMSF051G22+ ATTCCTTCCCAACTCAACCCCTCATGATTCTTACTTCTGTCAGCTTCTTCCACTTTCTTT
                      ____________________________________________________________
consensus ATTCCTTCCCAACTCAACCCCTCATGATTCTTACTTCTGTCAGCTTCTTCCACTTTCTTT
 
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rJMSF051G22- TCAATGGGCATACCAAAATTAGGCCCTTCAGCATGAGCTTCATGATGGTCCATGTCCGAG
JMFS095F09+ TCAATGGGCATACCAAAATTAGGCCCTTCAGCATGAGCTTCATGATGGTCCATGTCCGAG
JMSF051G22+ TCAATGGGCATACCAAAATTAGGCCCTTCAGCATGAGCTTCATGATGGTCCATGTCCGAG
                      ____________________________________________________________
consensus TCAATGGGCATACCAAAATTAGGCCCTTCAGCATGAGCTTCATGATGGTCCATGTCCGAG
 
. : . : . : . : . : . :
rJMSF051G22- CTCAATTTCTTGTTCTCAATATCTTCAGCAACATCATAAGCAG
JMFS095F09+ CTCAATTTCTTGTTCTCAATATCTTCAGCAACATCATAAGCAGCAGAAGTAGGTGGAACA
JMSF051G22+ CTCAATTTCTTGTTCTCAATATCTTCAGCAACATCATAAGCAGCAGAAGTAGGTGGAACA
                      ____________________________________________________________
consensus CTCAATTTCTTGTTCTCAATATCTTCAGCAACATCATAAGCAGCAGAAGTAGGTGGAACA
 
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JMFS095F09+ TCGTCCTCAATAATCTCTCCTTCCTCCATATCATAATCGATCCCCAAATTCGAACTGCTC
JMSF051G22+ TCGTCCTCAATAATCTCTCCTTCCTCCATATCATAATCGATCCCCAAATTCGAACTGCTC
                      ____________________________________________________________
consensus TCGTCCTCAATAATCTCTCCTTCCTCCATATCATAATCGATCCCCAAATTCGAACTGCTC
 
. : . : . : . : . : . :
JMFS095F09+ ATAGCCACACCCACTGCTCCGCTTCCAAGGACCTCCTTTCCGCCCTCAGTTTCAACCTCA
JMSF051G22+ ATAGCCACACCCACTGCTCCGCTTCCAAGGACCTCCTTTCCGCCCTCAGTTTCAACCTCA
                      ____________________________________________________________
consensus ATAGCCACACCCACTGCTCCGCTTCCAAGGACCTCCTTTCCGCCCTCAGTTTCAACCTCA
 
. : . : . : . : . : . :
JMFS095F09+ GCCTCCTTAACCTCCGTTTCGAGTTTCGAATCAATCTCTTCGTGCTTCTTTCCGTGGTGG
JMSF051G22+ GCCTCCTTAACCTCCGTTTCGAGTTTCGAATCAATCTCTTCGTGCTTCTTTCCGTGGTGG
                      ____________________________________________________________
consensus GCCTCCTTAACCTCCGTTTCGAGTTTCGAATCAATCTCTTCGTGCTTCTTTCCGTGGTGG
 
. : . : . : . : . : . :
JMFS095F09+ CGATGGTGGCGACGCCGGTGGTGGTGGTGGTGGTGACCGTGCTTACGACGCTTCGAAGGC
JMSF051G22+ CGATGGTGGCGACGCCGGTGGTGGTGGTGGTGGTGACCGTGCTTACGACGCTTCGAAGGC
                      ____________________________________________________________
consensus CGATGGTGGCGACGCCGGTGGTGGTGGTGGTGGTGACCGTGCTTACGACGCTTCGAAGGC
 
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JMFS095F09+ TCGTCAGTTTCGACATCGGAATGAGAGGAACGGTGGTGCTTGCGACGAG
JMSF051G22+ TCGTCAGTTTCGACATCGGAATGAGAGGAACGGTGGTGCTTGCGACGAGCAGGGTCACTG
                      ____________________________________________________________
consensus TCGTCAGTTTCGACATCGGAATGAGAGGAACGGTGGTGCTTGCGACGAGCAGGGTCACTG
 
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JMSF051G22+ GAATCACTGGTCATGTTGGCTGGAATTGAATTGGGTTTGCAAGAATTAGGGTTTGGCTCT
                      ____________________________________________________________
consensus GAATCACTGGTCATGTTGGCTGGAATTGAATTGGGTTTGCAAGAATTAGGGTTTGGCTCT
 
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JMSF051G22+ GCAGAGAGTTCGCTAAACGGGTGAGAAATTCCTTTCGGGTTCGAAATTCAGATACATCCC
                      ____________________________________________________________
consensus GCAGAGAGTTCGCTAAACGGGTGAGAAATTCCTTTCGGGTTCGAAATTCAGATACATCCC