Contig 009573:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P11Sequence609009573 (15)ref|XP_002285307.2|9e-124PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera] emb|CBI36254.782009573 (15)gb|ADK73610.1|2e-114small GTP binding protein [Ipomoea batatas]
JMFN004H12Sequence657009573 (15)gb|ADK73610.1|1e-150small GTP binding protein [Ipomoea batatas]
JMSF016G08Sequence242009573 (15)gb|KJB64812.1|5e-33hypothetical protein B456_010G066000 [Gossypium raimondii]775009573 (15)gb|ADK73610.1|8e-133small GTP binding protein [Ipomoea batatas]
JMSF017G08Sequence120009573 (15)
JMSF021D08Sequence705009573 (15)gb|ADK73610.1|4e-154small GTP binding protein [Ipomoea batatas]751009573 (15)gb|ADK73610.1|2e-118small GTP binding protein [Ipomoea batatas]
JMSF026M06Sequence671009573 (15)emb|CDY06600.1|4e-148BnaC02g13240D [Brassica napus]701009573 (15)gb|ADK73610.1|3e-104small GTP binding protein [Ipomoea batatas]
JMSF030O02Sequence650009573 (15)emb|CDY06600.1|7e-143BnaC02g13240D [Brassica napus]747009573 (15)gb|ADK73610.1|2e-118small GTP binding protein [Ipomoea batatas]
JMSF035E17Sequence402000815 (10)739009573 (15)gb|ADK73610.1|4e-114small GTP binding protein [Ipomoea batatas]
JMSF050G03Sequence203009573 (15)151009573 (15)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF016G08- GAAGACAATCATTCTGCT
JMFF004P11- AAGACAATCATTCTGCT
JMSF030O02- AAGACAATCATTCTGCT
JMSF026M06- AAGACAATCATTCTGCT
JMSF021D08- AGACAATCATTCTGCT
                      ____________________________________________________________
consensus GAAGACAATCATTCTGCT
 
. : . : . : . : . : . :
JMSF016G08- CTCTCTATAGCCTCCGTCTCTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
JMFF004P11- CTCTCTATAGCCTCCGTCTCTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
JMSF030O02- CTCTCTATAGCCTCCGTCTCTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
JMSF026M06- CTCTCTATAGCCTCCGTCTCTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
JMFN004H12- CTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
JMSF021D08- CTCTCTATAGCCTCCGTCTCTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
                      ____________________________________________________________
consensus CTCTCTATAGCCTCCGTCTCTTGCTCTCTCGCTCTAACCAAGCAACGACGCTATGGCACT
 
. : . : . : . : . : . :
JMSF016G08- TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTGGTGATGGTGG
JMFF004P11- TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTGGTGATGGTGG
JMSF030O02- TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTGGTGATGGTGG
JMSF026M06- TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTGGTGATGGTGG
JMFN004H12- TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTCGTGATGGTGG
JMSF021D08- TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTGGTGATGGTGG
                      ____________________________________________________________
consensus TCCAAATCAGCAGACAGTTGATTACCCAAGCTTTAAGCTTGTAATTGTTGGTGATGGTGG
 
. : . : . : . : . : . :
JMSF016G08- AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
JMFF004P11- AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
JMSF030O02- AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
JMSF026M06- AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
JMFN004H12- AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
JMSF021D08- AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
rJMSF016G08+ CGAGAAGAAATATGA
                      ____________________________________________________________
consensus AACTGGAAAAACTACATTTGTGAAGAGGCACATTACTGGTGAATTCGAGAAGAAATATGA
 
. : . : . : . : . : . :
JMSF016G08- ACCCACCATAGGTGTGGAGGTGCATCCNTTGGATTTCTTCACAA
JMFF004P11- ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
JMSF030O02- ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
JMSF026M06- ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
JMFN004H12- ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
JMSF021D08- ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
rJMSF016G08+ ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
rJMSF030O02+ TCACAAATTGTGGAAAAATCAG
rJMSF035E17+ AATCAG
rJMSF021D08+ TCACAAATTGTGGAAAAATCAG
rJMFF004P11+ AAAAATCAG
                      ____________________________________________________________
consensus ACCCACCATAGGTGTGGAGGTGCATCCATTGGATTTCTTCACAAATTGTGGAAAAATCAG
 
. : . : . : . : . : . :
JMFF004P11- ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
JMSF030O02- ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
JMSF026M06- ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
JMFN004H12- ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
JMSF021D08- ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
rJMSF016G08+ ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
rJMSF030O02+ ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
rJMSF035E17+ ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
rJMSF026M06+ AAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
rJMSF021D08+ ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
rJMFF004P11+ ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
                      ____________________________________________________________
consensus ATTTTATTGTTGGGATACTGCTGGCCAAGAAAAATTTGGTGGTCTTAGGGATGGTTACTA
 
. : . : . : . : . : . :
JMFF004P11- TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
JMSF030O02- TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
JMSF026M06- TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
JMFN004H12- TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
JMSF021D08- TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
rJMSF016G08+ TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
rJMSF030O02+ TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
rJMSF035E17+ TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
rJMSF026M06+ TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
rJMSF021D08+ TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
rJMFF004P11+ TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
                      ____________________________________________________________
consensus TATTCACGGACAATGTGCTATTATCATGTTTGATGTAACTGCTAGATTGACATACAAAAA
 
. : . : . : . : . : . :
JMFF004P11- TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
JMSF030O02- TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
JMSF026M06- TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
JMFN004H12- TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
JMSF021D08- TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
rJMSF016G08+ TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
rJMSF030O02+ TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
rJMSF035E17+ TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
rJMSF026M06+ TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
rJMSF021D08+ TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
rJMFF004P11+ TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
                      ____________________________________________________________
consensus TGTGCCCACATGGCACCGTGATCTTTGCCGTGTTTGTGAAAACATTCCCATTGTTCTTTG
 
. : . : . : . : . : . :
JMFF004P11- CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
JMSF030O02- CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
JMSF026M06- CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
JMFN004H12- CGGGAACAAGGTTGATGAGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
JMSF021D08- CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
rJMSF016G08+ CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
rJMSF030O02+ CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
rJMSF035E17+ CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
rJMSF026M06+ CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
rJMSF021D08+ CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
rJMFF004P11+ CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
                      ____________________________________________________________
consensus CGGGAACAAGGTTGATGTGAAGAACAGGCAAGTTAAGGCCAAGCAGGTTACCTTTCATCG
 
. : . : . : . : . : . :
JMFF004P11- GAAGAANAATTTGCAGTATTACNAAATATCTGCAAAGAGTAATTACAACTTTGANAANCC
JMSF030O02- GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
JMSF026M06- GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
JMFN004H12- GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
JMSF021D08- GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
rJMSF016G08+ GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
rJMSF030O02+ GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
rJMSF035E17+ GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
rJMSF026M06+ GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
rJMSF021D08+ GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
rJMFF004P11+ GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
                      ____________________________________________________________
consensus GAAGAAGAATTTGCAGTATTACGAAATATCTGCAAAGAGTAATTACAACTTTGAGAAGCC
 
. : . : . : . : . : . :
JMFF004P11- TTTCCTCTACCTCGCCAGGAAACTTGCTGGGG
JMSF030O02- TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
JMSF026M06- TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
JMFN004H12- TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
JMSF021D08- TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
rJMSF016G08+ TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
rJMSF030O02+ TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
rJMSF035E17+ TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
rJMSF026M06+ TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
rJMSF021D08+ TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
rJMFF004P11+ TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
                      ____________________________________________________________
consensus TTTCCTCTACCTCGCCAGGAAACTTGCTGGGGATCCGAACTTGCACTTTGTTGAGTCGCC
 
. : . : . : . : . : . :
JMSF030O02- CGCACTTGCTCCTCCAGAAGTACAAATTGACT
JMSF026M06- CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACG
JMFN004H12- CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
JMSF021D08- CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
rJMSF016G08+ CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
rJMSF030O02+ CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
rJMSF035E17+ CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
rJMSF026M06+ CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
rJMSF021D08+ CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
rJMFF004P11+ CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
                      ____________________________________________________________
consensus CGCACTTGCTCCTCCAGAAGTACAAATTGACTTAGCTGCACAACAGCAGCACGAGGCTGA
 
. : . : . : . : . : . :
JMFN004H12- GCTAATTGCTGCTGC
JMSF021D08- GCTAATTGCTGCTGCA
rJMSF016G08+ GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
rJMSF030O02+ GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
rJMSF035E17+ GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
rJMSF026M06+ GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
rJMSF021D08+ GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
rJMFF004P11+ GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
                      ____________________________________________________________
consensus GCTAATTGCTGCTGCAAGCCAACCTCTACCAGATGACGATGATGACACCTTTGAGTAAAT
 
. : . : . : . : . : . :
rJMSF017G08+ TCATATTTTNGTAGCAGAAAAGCAGCTTTTATT
rJMSF016G08+ CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
rJMSF030O02+ CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
rJMSF035E17+ CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
rJMSF026M06+ CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
rJMSF021D08+ CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
rJMFF004P11+ CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
                      ____________________________________________________________
consensus CCATCCATTGGCCGATTGGAATGCACTTCATATTTTAGTAGCAGAAAAGCAGCTTTTATT
 
. : . : . : . : . : . :
rJMSF017G08+ TTGTNTTGGGTGTCNCCNTTTTTTTCAAGTGGGAAGGTGCTTATGAGTCACGTAAGGGAN
rJMSF016G08+ TTGTGTTGGGTGTCACCATTTTTTTCAAGTGGGAAGGTGCTTATGAGT-ACGTAAGGGAA
rJMSF030O02+ TTGTGTTGGGTGTCACCATTTTTTTCAAGTGGGAAGGTGCTTATGAGT-ACGTAAGGGAA
rJMSF035E17+ TTGTGTTGGGTGTCACCATTTTTTTCAAGTGGGAAGGTGCTTATGAGT-ACGTAAGGGAA
rJMSF026M06+ TTGTGTTGGGTGTCACCATTTTTTTCAAGT-GGAAGGTGCTTATGAGT-ACGTAAGGGAA
rJMSF050G03+ GTGCTTATGAGT-ACGTAAGGGAA
rJMSF021D08+ TTGTGTTGGGTGTCACCATTTTTTTCAAGTGGGAAGGTGCTTATGAGT-ACGTAAGGGAA
rJMFF004P11+ TTGTGTTGGGTGTCACCATTTTTTTCAAGTGGGAAGGTGCTTATGAGT-ACGTAAGGGAA
JMSF050G03- GTGCTTATGAGT-ACGTAAGGGAA
                      ____________________________________________________________
consensus TTGTGTTGGGTGTCACCATTTTTTTCAAGTGGGAAGGTGCTTATGAGT-ACGTAAGGGAA
 
. : . : . : . : . : . :
rJMSF017G08+ AATATGAATGATTGATGA
rJMSF016G08+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
rJMSF030O02+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
rJMSF035E17+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
rJMSF026M06+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
rJMSF050G03+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
rJMSF021D08+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
rJMFF004P11+ AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
JMSF050G03- AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
                      ____________________________________________________________
consensus AATATGAATGATTGATGATGGTCTTTATGAGATGTTGAACTAATTTTGGGTATTTTTTTA
 
. : . : . : . : . : . :
rJMSF016G08+ CCTGATTTGTTGTGGGGAAGTATT
rJMSF030O02+ CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTCATGTCCTTCCTATTGAGTG
rJMSF035E17+ CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTC
rJMSF026M06+ CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTCATGTCCTTCC
rJMSF050G03+ CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTC
rJMSF021D08+ CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTCATGTCCTTCCTATTGAGTG
rJMFF004P11+ CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTCATGTCCTTCCTATTGAGTG
JMSF050G03- CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTCATGTCCTTCCTATTGAGTG
                      ____________________________________________________________
consensus CCTGATTTGTTGTGGGGAAGTATTTGAAGCCATATAAATTCATGTCCTTCCTATTGAGTG
 
. : . : . : . : . : . :
rJMSF030O02+ TGGATC
rJMSF021D08+ TGGATC
rJMFF004P11+ TGGATCTATGTATTAATGGATCA-TTGAAATGAAAGGTGTTTTTAATATCA
JMSF050G03- TGGATCTATGTATTAATGGATCATTTGAAATGAAAGGTGTTTTTAATATCAAAAAAAAAA
                      ____________________________________________________________
consensus TGGATCTATGTATTAATGGATCATTTGAAATGAAAGGTGTTTTTAATATCAAAAAAAAAA