Contig 009562:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011K04Sequence354009562 (2)ref|XP_009617843.1|1e-18PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplast612004401 (2)ref|XP_009759775.1|7e-41PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplast
JMSF048O03Sequence698009562 (2)ref|XP_009617843.1|3e-67PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplast540004401 (2)ref|XP_009759775.1|2e-43PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplast

Alignment

This contig is upended


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JMSF048O03+                                 CCCCAGATGTTTGAGTGGCAGCAAGAACNTCAACAAAT
                      ____________________________________________________________
consensus                                   CCCCAGATGTTTGAGTGGCAGCAAGAACNTCAACAAAT
 
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JMSF048O03+           CCATCTCCAAAGTTCATTCCATTGCCAAGATTATACGAACGAGAAAGGTGACGATTGAGG
                      ____________________________________________________________
consensus             CCATCTCCAAAGTTCATTCCATTGCCAAGATTATACGAACGAGAAAGGTGACGATTGAGG
 
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JMSF048O03+           GAACAAGAATTAAACTGCGTTAAGATGAAAATTTTACGAACACCACTGTTGATGCAATTG
                      ____________________________________________________________
consensus             GAACAAGAATTAAACTGCGTTAAGATGAAAATTTTACGAACACCACTGTTGATGCAATTG
 
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JMSF048O03+           CTCATTGGTACATCAATCAGCCTATAGCAACCACCTATAGGAACAGCGGGTTTAGCTCTA
                      ____________________________________________________________
consensus             CTCATTGGTACATCAATCAGCCTATAGCAACCACCTATAGGAACAGCGGGTTTAGCTCTA
 
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JMSF011K04+                 GTAAGAGGAAAGAGGCGAGTGCCAGCGCCTCCACCCAAAACGATTGCAGCAACA
JMSF048O03+           TTCTTTGTAAGAGGAAAGAGGCGAGTGCCAGCGCCTCCACCCAAAACGATTGCAGCAACA
                      ____________________________________________________________
consensus             TTCTTTGTAAGAGGAAAGAGGCGAGTGCCAGCGCCTCCACCCAAAACGATTGCAGCAACA
 
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JMSF011K04+           GTGCTTGGGTCTGCCTTTGGAAGCATACCGTCTAGTGGTCCTTCGTATGCCTGAGACAGA
JMSF048O03+           GTGCTTGGGTCTGCCTTTGGAAGCATACCGTCTAGTGGTCCTTCGTATGCCTGAGACAGA
                      ____________________________________________________________
consensus             GTGCTTGGGTCTGCCTTTGGAAGCATACCGTCTAGTGGTCCTTCGTATGCCTGAGACAGA
 
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JMSF011K04+           AATGTTGTGCTAATTTCTTGTTTAAGCACAGAAAACGCGGGTGAAGGTTTAACCTTGCTA
JMSF048O03+           AATGTTGTGCTAATTTCTTGTTTAAGCACAGAAAACGCGGGTGAAGGTTTAACCTTGCTA
                      ____________________________________________________________
consensus             AATGTTGTGCTAATTTCTTGTTTAAGCACAGAAAACGCGGGTGAAGGTTTAACCTTGCTA
 
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JMSF011K04+           CCCCTTCCACCTGTTCTAACAGTCTTAATCCTGATCTTCTCACCCAAAAACACATTATCT
JMSF048O03+           CCCCTTCCACCTGTTCTAACAGTCTTAATCCTGATCTTCTCACCCAAAAACACATTATCT
                      ____________________________________________________________
consensus             CCCCTTCCACCTGTTCTAACAGTCTTAATCCTGATCTTCTCACCCAAAAACACATTATCT
 
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JMSF011K04+           CCATGATCCACACCTTTGCTAATGGGTATGGAGTTCACATTAGCCTTCATTGTTGCACAT
JMSF048O03+           CCATGATCCACACCTTTGCTAATGGGTATGGAGTTCACATTAGCCTTCATTGTTGCACAT
                      ____________________________________________________________
consensus             CCATGATCCACACCTTTGCTAATGGGTATGGAGTTCACATTAGCCTTCATTGTTGCACAT
 
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JMSF011K04+           AAGGCATTCATCATTCCTCAAATTCTCAATGTCTTTGGAAAGGCAGGTTCTTGAAACA  
JMSF048O03+           AAGGCATTCATCATTCCTCAAATTCTCAATGTCTTTGGAAAGGCAGGTTCTTGAAACAGT
                      ____________________________________________________________
consensus             AAGGCATTCATCATTCCTCAAATTCTCAATGTCTTTGGAAAGGCAGGTTCTTGAAACAGT
 
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JMSF048O03+           ATGTATTATGGGAAAGATGACCCAGATTTGTGACTGGAAATTGGAATGGATTGATTCATG
                      ____________________________________________________________
consensus             ATGTATTATGGGAAAGATGACCCAGATTTGTGACTGGAAATTGGAATGGATTGATTCATG
 
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JMSF048O03+           AACTTGAGTTTAAAAGCGGGGAGTGATCACAAGAAAAAAGAGAAAAAGTTTATGGCTGTC
                      ____________________________________________________________
consensus             AACTTGAGTTTAAAAGCGGGGAGTGATCACAAGAAAAAAGAGAAAAAGTTTATGGCTGTC