Contig 009557:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037P08+                               GGAGAACGAACATAAAACACCAGTTTATAACTCTTTCCAT
JMSF041N02+                             CAGGAGAACGAACATAAAACACCAGTTTATAACTCTTTCCAT
                      ____________________________________________________________
consensus                               CAGGAGAACGAACATAAAACACCAGTTTATAACTCTTTCCAT
 
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JMSF037P08+           CTTGAATATTCATGCCCCAAAATCCAGGATTGTAAACGCCAACTCCCCCATTTGTACAGG
JMSF041N02+           CTTGAATATTCATGCCCCAAAATCCAGGATTGTAAACGCCAACTCCCCCATTTGTACAGG
                      ____________________________________________________________
consensus             CTTGAATATTCATGCCCCAAAATCCAGGATTGTAAACGCCAACTCCCCCATTTGTACAGG
 
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JMSF037P08+           TATTTGCACCTCCACTGCCACAATGAACATCTAACCGAAGTGCAATTTTATTCCGATCAA
JMSF041N02+           TATTTGCACCTCCACTGCCACAATGAACATCTAACCGAAGTGCAATTTTATTCCGATCAA
                      ____________________________________________________________
consensus             TATTTGCACCTCCACTGCCACAATGAACATCTAACCGAAGTGCAATTTTATTCCGATCAA
 
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JMSF037P08+           AGCAAGATGAACGATCAGTCGACACAGTCAAAGAGGACTCATCCCCAATAATTGACCAAG
JMSF041N02+           AGCAAGATGAACGATCAGTCGACACAGTCAAAGAGGACTCATCCCCAATAATTGACCAAG
                      ____________________________________________________________
consensus             AGCAAGATGAACGATCAGTCGACACAGTCAAAGAGGACTCATCCCCAATAATTGACCAAG
 
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JMSF037P08+           GATCAATATTGGAGGGTGTATTGGGACCCCCAGCTTCAAAACCTCTGTTGCTAACAAGCT
JMSF041N02+           GATCAATATTGGAGGGTGTATTGGGACCCCCAGCTTCAAAACCTCTGTTGCTAACAAGCT
                      ____________________________________________________________
consensus             GATCAATATTGGAGGGTGTATTGGGACCCCCAGCTTCAAAACCTCTGTTGCTAACAAGCT
 
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JMSF037P08+           CTGCCCACAATCCACCAGAACCAGCATGATTTATTTCCTCAAAGAATAAACCAAACAAAC
JMSF041N02+           CTGCCCACAATCCACCAGAACCAGCATGATTTATTTCCTCAAAGAATAAACCAAACAAAC
                      ____________________________________________________________
consensus             CTGCCCACAATCCACCAGAACCAGCATGATTTATTTCCTCAAAGAATAAACCAAACAAAC
 
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JMSF037P08+           TGTCAGGTATTTTCTTTGCTGATGCTTCTGAGGCATCCACATGGAGCGATGCTACCATTG
JMSF041N02+           TGTCAGGTATTTTCTTTGNTGATGCTTCTGAGGCATCCACATGGAGCGATGCTACCATTG
JMSF048K22+                              TGATGCTTCTGAGGCATCCACATGGAGCGATGCTACCATTG
                      ____________________________________________________________
consensus             TGTCAGGTATTTTCTTTGCTGATGCTTCTGAGGCATCCACATGGAGCGATGCTACCATTG
 
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JMSF037P08+           CATCAATCTCAGTTCCAGAACATTGATTTAGGGCAAGAAGCCCAAAGAAAAGGAAACTAA
JMSF041N02+           CATCAATCTCAGTTCCAGAACATTGATTTAGGGCAAGAAGCCCAAAGAAAAGGAAACTAA
JMSF048K22+           CATCAATCTCAGTTCCAGAACATTGATTTAGGGCAAGAAGCCCAAAGAAAAGGAAACTAA
                      ____________________________________________________________
consensus             CATCAATCTCAGTTCCAGAACATTGATTTAGGGCAAGAAGCCCAAAGAAAAGGAAACTAA
 
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JMSF037P08+           GGATGACAAAACGGGACGAAGGAGGAGAACCCATTGCTTTCTCACCACATTCAGAGACTC
JMSF041N02+           GGATGACAAAACGGGACGAAGGAGGAGAACCCATTGCTTTCTCACCACATTCAGAGACTC
JMSF048K22+           GGATGACAAAACGGGACGAAGGAGGAGAACCCATTGCTTTCTCACCACATTCAGAGACTC
                      ____________________________________________________________
consensus             GGATGACAAAACGGGACGAAGGAGGAGAACCCATTGCTTTCTCACCACATTCAGAGACTC
 
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JMSF037P08+           CCTAGCCAATTTAAGTCC                                          
JMSF041N02+           CCTAGCCAATTTAAGTCCTG                                        
JMSF048K22+           CCTAGCCAATTTAAGTCCTGCAAATATGCTAATAAAGTTAGTACTTAGTAGGCAATGAAA
                      ____________________________________________________________
consensus             CCTAGCCAATTTAAGTCCTGCAAATATGCTAATAAAGTTAGTACTTAGTAGGCAATGAAA
 
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JMSF048K22+           TTATCTGAAGAACACTCTGTAAATCTCCGGACCATTTGGATTGTCTTATAATAAACACCA
                      ____________________________________________________________
consensus             TTATCTGAAGAACACTCTGTAAATCTCCGGACCATTTGGATTGTCTTATAATAAACACCA
 
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JMSF048K22+           TTCTGCACACTGTGCCAGACCAAGTGAAATAAAGCTTTCAACTTTGACAAACTTCACCAA
                      ____________________________________________________________
consensus             TTCTGCACACTGTGCCAGACCAAGTGAAATAAAGCTTTCAACTTTGACAAACTTCACCAA
 
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JMSF048K22+           CTAAGATGATCAAACTGCACACTCAAAAATGATATTACAATATTGTTGACCAAGGGAACA
                      ____________________________________________________________
consensus             CTAAGATGATCAAACTGCACACTCAAAAATGATATTACAATATTGTTGACCAAGGGAACA
 
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JMSF048K22+           CAATAAGTTGAGAAAAAAATCAACGAAAACAGAACAAAATTCACAAAGAAACATAGCAAT
                      ____________________________________________________________
consensus             CAATAAGTTGAGAAAAAAATCAACGAAAACAGAACAAAATTCACAAAGAAACATAGCAAT
 
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JMSF048K22+           ACATGAGAAGATTGAACGAGAAAAGCAAAGAATTTCATATCAACAAGAAAGCAGAAAACA
                      ____________________________________________________________
consensus             ACATGAGAAGATTGAACGAGAAAAGCAAAGAATTTCATATCAACAAGAAAGCAGAAAACA
 
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JMSF048K22+           TTTCCTACCTGGAAACGATCCAGTCTGGAAGAAAGAGTGCGGCGAAGATGTTCTATTTCA
                      ____________________________________________________________
consensus             TTTCCTACCTGGAAACGATCCAGTCTGGAAGAAAGAGTGCGGCGAAGATGTTCTATTTCA
 
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JMSF048K22+           AGAGTCCTTTTGTTACGATGCTGAGCTCACAGTCACTGCAAGCTGTGTTGGTTAGTGATG
                      ____________________________________________________________
consensus             AGAGTCCTTTTGTTACGATGCTGAGCTCACAGTCACTGCAAGCTGTGTTGGTTAGTGATG
 
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JMSF048K22+           AGAGCTGACCGCGGTTTCGCGTGGATATAAATATACGTGGAGAGACCAGAGAGAGTGACC
                      ____________________________________________________________
consensus             AGAGCTGACCGCGGTTTCGCGTGGATATAAATATACGTGGAGAGACCAGAGAGAGTGACC