Contig 009550:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039C20Sequence446009550 (2)emb|CDP06702.1|1e-21unnamed protein product [Coffea canephora]775013182 (4)ref|XP_011094705.1|5e-104PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic
JMSF047N13Sequence655009550 (2)emb|CDP06702.1|3e-59unnamed protein product [Coffea canephora]682013182 (4)ref|XP_009622743.1|6e-90PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047N13+ TCCGGCGGACCTTTCCGGTGACCAAAGTGAAGAGCGATAAGGCCTCGGTGGGGCC
                      ____________________________________________________________
consensus TCCGGCGGACCTTTCCGGTGACCAAAGTGAAGAGCGATAAGGCCTCGGTGGGGCC
 
. : . : . : . : . : . :
JMSF047N13+ ATCATCTCCGGAGTTAGAAAGGCGGCTGATGACGGCGCTCCAGGCCTTGACGTGGGGGAG
                      ____________________________________________________________
consensus ATCATCTCCGGAGTTAGAAAGGCGGCTGATGACGGCGCTCCAGGCCTTGACGTGGGGGAG
 
. : . : . : . : . : . :
JMSF047N13+ GTAACCGGATTTGAGCATGGACTTGATAATGGAGGTGGCGTAGAGGATTTGGCCGGCTTT
                      ____________________________________________________________
consensus GTAACCGGATTTGAGCATGGACTTGATAATGGAGGTGGCGTAGAGGATTTGGCCGGCTTT
 
. : . : . : . : . : . :
JMFF039C20+ CCGAAGGAATTGGCGTCGAGGCGGTGGAGCTGGCGATC
JMSF047N13+ AGCTGCGGCGACGGCGAGGAGGCCGAAGGAATTGGCGTCGAGGCGGTGGAGCTGGCGATC
                      ____________________________________________________________
consensus AGCTGCGGCGACGGCGAGGAGGCCGAAGGAATTGGCGTCGAGGCGGTGGAGCTGGCGATC
 
. : . : . : . : . : . :
JMFF039C20+ ATTGCGGAGACGGCGGACAATGGACTGGGCGCGCGTGAGGGCAACGTGGGTGTTCTGATA
JMSF047N13+ ATTGCGGAGACGGCGGACAATGGACTGGGCGCGCGTGAGGGCAACGTGGGTGTTCTGATA
                      ____________________________________________________________
consensus ATTGCGGAGACGGCGGACAATGGACTGGGCGCGCGTGAGGGCAACGTGGGTGTTCTGATA
 
. : . : . : . : . : . :
JMFF039C20+ GGATAATTGTGAAACTAAACGGCTAAGGCATGTGGGGTTGGGAAGTTGGTCAGATTGAGT
JMSF047N13+ GGATAATTGTGAAACTAAACGGCTAAGGCATGTGGGGTTGGGAAGTTGGTCAGATTGAGT
                      ____________________________________________________________
consensus GGATAATTGTGAAACTAAACGGCTAAGGCATGTGGGGTTGGGAAGTTGGTCAGATTGAGT
 
. : . : . : . : . : . :
JMFF039C20+ GTACGCCAACCATGCCTCTTCGGTTTTCTTCTCCTGGAGAAGTGTGAGGAGAGCCTGCTC
JMSF047N13+ GTACGCCAACCATGCCTCTTCGGTTTTCTTCTCCTGGAGAAGTGTGAGGAGAGCCTGCTC
                      ____________________________________________________________
consensus GTACGCCAACCATGCCTCTTCGGTTTTCTTCTCCTGGAGAAGTGTGAGGAGAGCCTGCTC
 
. : . : . : . : . : . :
JMFF039C20+ TTGAGGATTAGCTAGTTGCTGGGGCGTAGTGATAACTAGAGAGGTAGCGGTGGAGGGCTT
JMSF047N13+ TTGAGGATTAGCTAGTTGCTGGGGCGTAGTGATAACTAGAGAGGTAGCGGTGGAGGGCTT
                      ____________________________________________________________
consensus TTGAGGATTAGCTAGTTGCTGGGGCGTAGTGATAACTAGAGAGGTAGCGGTGGAGGGCTT
 
. : . : . : . : . : . :
JMFF039C20+ ACCGGCGGTTTGAACATGAACTGAGTGGGTAACTCTGGGGTTACCGGCGGCGGAAGTGGA
JMSF047N13+ ACCGGCGGTTTGAACATGAACTGAGTGGGTAACTCTGGGGTTACCGGCGGCGGAAGTGGA
                      ____________________________________________________________
consensus ACCGGCGGTTTGAACATGAACTGAGTGGGTAACTCTGGGGTTACCGGCGGCGGAAGTGGA
 
. : . : . : . : . : . :
JMFF039C20+ GGAAGCAAATGGTGAGGAAAGCCAGCGGAGAGAGAAGCTATGGGTTGATGGAAATGGGGA
JMSF047N13+ GGAAGCAAATGGTGAGGAAAGCCAGCGGAGAGAGAAGCTATGGGTTGATGGAAATGGGGA
                      ____________________________________________________________
consensus GGAAGCAAATGGTGAGGAAAGCCAGCGGAGAGAGAAGCTATGGGTTGATGGAAATGGGGA
 
. : . : . : . : . : . :
JMFF039C20+ GAAAAATGTTGAAGGAGGTTTAGTAGTGTTCATGGCTGGTCCATC
JMSF047N13+ GAAGAATGTTGAAGGAGGTTTAGTAGTGTTCATGGCTGGTCCATCTGGGGTTGTGTCGTC
                      ____________________________________________________________
consensus GAAGAATGTTGAAGGAGGTTTAGTAGTGTTCATGGCTGGTCCATCTGGGGTTGTGTCGTC