Contig 009549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011P07Sequence626009549 (4)emb|CDP15053.1|2e-109unnamed protein product [Coffea canephora]
JMSF022M06Sequence655009549 (4)emb|CDP15053.1|2e-108unnamed protein product [Coffea canephora]744007225 (3)ref|XP_011074284.1|2e-127PREDICTED: tubulin gamma-1 chain [Sesamum indicum]
JMSF047M18Sequence698009549 (4)emb|CDP15053.1|4e-117unnamed protein product [Coffea canephora]750007225 (3)ref|XP_011074284.1|3e-122PREDICTED: tubulin gamma-1 chain [Sesamum indicum]
JMSF047P04Sequence666009549 (4)emb|CDP15053.1|5e-119unnamed protein product [Coffea canephora]745007225 (3)ref|XP_011074284.1|2e-127PREDICTED: tubulin gamma-1 chain [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047P04+ ATGTCTGAACAAGTTTTTTGCTATAGCGATCATTAAGAGTCTC
JMSF022M06+ GTCTC
JMFN011P07+ GTCTC
JMSF047M18+ TGAACAAGTTTTTTGCTATAGCGATCATTAAGAGTCTC
                      ____________________________________________________________
consensus ATGTCTGAACAAGTTTTTTGCTATAGCGATCATTAAGAGTCTC
 
. : . : . : . : . : . :
JMSF047P04+ CAACAAATATGAGCCCATACCTGAGCCTGTTCCACCAGCAATTGAATGACAGAGAACAAA
JMSF022M06+ CAACAAATATGAGCCCATACCTGAGCCTGTTCCACCAGCAATTGAATGACAGAGAACAAA
JMFN011P07+ CAACAAATATGAGCCCATACCTGAGCCTGTTCCACCAGCAATTGAATGACAGAGAACAAA
JMSF047M18+ CAACAAATATGAGCCCATACCTGAGCCTGTTCCACCAGCAATTGAATGACAGAGAACAAA
                      ____________________________________________________________
consensus CAACAAATATGAGCCCATACCTGAGCCTGTTCCACCAGCAATTGAATGACAGAGAACAAA
 
. : . : . : . : . : . :
JMSF047P04+ ACCCTCAAGACTATCACTTCCATCAGCCTCTCTATCAATCATGTCCATTAAGTCTTCCTC
JMSF022M06+ ACCCTCAAGACTATCACTTCCATCAGCCTCTCTATCAATCATGTCCATTAAGTCTTCCTC
JMFN011P07+ ACCCTCAAGACTATCACTTCCATCAGCCTCTCTATCAATCATGTCCATTAAGTCTTCCTC
JMSF047M18+ ACCCTCAAGACTATCACTTCCATCAGCCTCTCTATCAATCATGTCCATTAAGTCTTCCTC
                      ____________________________________________________________
consensus ACCCTCAAGACTATCACTTCCATCAGCCTCTCTATCAATCATGTCCATTAAGTCTTCCTC
 
. : . : . : . : . : . :
JMSF047P04+ ATATTGCTTTCCCTGATGATATCCACTTGCCCAATTATTGCCAGCACCTCCCCCATGATC
JMSF022M06+ ATATTGCTTTCCCTGATGATATCCACTTGCCCAATTATTGCCAGCACCTCCCCCATGATC
JMFN011P07+ ATATTGCTTTCCCTGATGATATCCACTTGCCCAATTATTGCCAGCACCTCCCCCATGATC
JMSF047M18+ ATATTGCTTTCCCTGATGATATCCACTTGCCCAATTATTGCCAGCACCTCCCCCATGATC
                      ____________________________________________________________
consensus ATATTGCTTTCCCTGATGATATCCACTTGCCCAATTATTGCCAGCACCTCCCCCATGATC
 
. : . : . : . : . : . :
JMSF047P04+ AGCAATAAATACATTCTCATGATTGTAAAGGTTCCTGTATTCGCCATTTTGTATACCATT
JMSF022M06+ AGCAATAAATACATTCTCATGATTGTAAAGGTTCCTGTATTCGCCATTTTGTATACCATT
JMFN011P07+ AGCAATAAATACATTCTCATGATTGTAAAGGTTCCTGTATTCGCCATTTTGTATACCATT
JMSF047M18+ AGCAATAAATACATTCTCATGATTGTAAAGGTTCCTGTATTCGCCATTTTGTATACCATT
                      ____________________________________________________________
consensus AGCAATAAATACATTCTCATGATTGTAAAGGTTCCTGTATTCGCCATTTTGTATACCATT
 
. : . : . : . : . : . :
JMSF047P04+ AATCACCCTGGGCTCCAAATCCATCAGCAAAGCCCGTGGAATATAGTGTTGATCATCAGC
JMSF022M06+ AATCACCCTGGGCTCCAAATCCATCAGCAAAGCCCGTGGAATATAGTGTTGATCATCAGC
JMFN011P07+ AATCACCCTGGGCTCCAAATCCATCAGCAAAGCCCGTGGAATATAGTGTTGATCATCAGC
JMSF047M18+ AATCACCCTGGGCTCCAAATCCATCAGCAAAGCCCGTGGAATATAGTGTTGATCATCAGC
                      ____________________________________________________________
consensus AATCACCCTGGGCTCCAAATCCATCAGCAAAGCCCGTGGAATATAGTGTTGATCATCAGC
 
. : . : . : . : . : . :
JMSF047P04+ TTGATAGAAAAATACATCTTTTCTATCACCTCCCTGAGTGGCGAAGTCTTCTAGAATGCC
JMSF022M06+ TTGATAGAAAAATACATCTTTTCTATCACCTCCCTGAGTGGCGAAGTCTTCTAGAATGCC
JMFN011P07+ TTGATAGAAAAATACATCTTTTCTATCACCTCCCTGAGTGGCGAAGTCTTCTAGAATGCC
JMSF047M18+ TTGATAGAAAAATACATCTTTTCTATCACCTCCCTGAGTGGCGAAGTCTTCTAGAATGCC
                      ____________________________________________________________
consensus TTGATAGAAAAATACATCTTTTCTATCACCTCCCTGAGTGGCGAAGTCTTCTAGAATGCC
 
. : . : . : . : . : . :
JMSF047P04+ ATCCTTACTGATGCCGTGCTCTAGGCAGAGCTGCTTCCAGAATTCCATTCCGATCTGATT
JMSF022M06+ ATCCTTACTGATGCCGTGCTCTAGGCAGAGCTGCTTCCAGAATTCCATTCCGATCTGATT
JMFN011P07+ ATCCTTACTGATGCCGTGCTCTAGGCAGAGCTGCTTCCAGAATTCCATTCCGATCTGATT
JMSF047M18+ ATCCTTACTGATGCCGTGCTCTAGGCAGAGCTGCTTCCAGAATTCCATTCCGATCTGATT
                      ____________________________________________________________
consensus ATCCTTACTGATGCCGTGCTCTAGGCAGAGCTGCTTCCAGAATTCCATTCCGATCTGATT
 
. : . : . : . : . : . :
JMSF047P04+ CCCGCATTGTCCCACTTGCAGAGTGATGATTTCCCTCGGCATTTTCGTCGTCCTCTTCCT
JMSF022M06+ CCCGCATTGTCCCACTTGCAGAGTGATGATTTCCCTCGGCATTTTCGTCGTCCTCTTCCT
JMFN011P07+ CCCGCATTGTCCCACTTGCAGAGTGATGATTTCCCTCGGCATTTTCGTCGTCCTCTTCCT
JMSF047M18+ CCCGCATTGTCCCACTTGCAGAGTGATGATTTCCCTCGGCATTTTCGTCGTCCTCTTCCT
                      ____________________________________________________________
consensus CCCGCATTGTCCCACTTGCAGAGTGATGATTTCCCTCGGCATTTTCGTCGTCCTCTTCCT
 
. : . : . : . : . : . :
JMSF047P04+ TCGTCTTCCCGGACAAAACCTCTACAGGTTTTCTAGGGTTTTTCTTGTGGATCCTCTGTA
JMSF022M06+ TCGTCTTCCCGGACAAAACCTCTACAGGTTTT-TAGGGTTTTTCTTGTGGATCCTCTGTA
JMFN011P07+ TCGTCTTCCCGGACAAAACCTCTACAGGTTTTCTAGGGTTTTTCTTGTGGATCCTCTGTA
JMSF047M18+ TCGTCTTCCCGGACAAAACCTCTACAGGTTTTCTAGGGTTTTTCTTGTGGATCCTCTGTA
                      ____________________________________________________________
consensus TCGTCTTCCCGGACAAAACCTCTACAGGTTTTCTAGGGTTTTTCTTGTGGATCCTCTGTA
 
. : . : . : . : . : . :
JMSF047P04+ ATCTTTATTGGGACTTGGGAGGGGAAAAAGGATGGAGGGAATTGCGAGTGTTAATTGTTA
JMSF022M06+ ATCTTTATTGGGACTTGGGAGGGGAAAAAGGATGGAGGGAATTGCGAGTGTTAATTGTTA
JMFN011P07+ ATCTTTATTGGGACTTGGGAGGGGAAAAAGGATGGAGGGAATTGCGAGTGTTAATTGTTA
JMSF047M18+ ATCTTTATTGGGACTTGGGAGGGGAAAAAGGATGGAGGGAATTGCGAGTGTTAATTGTTA
                      ____________________________________________________________
consensus ATCTTTATTGGGACTTGGGAGGGGAAAAAGGATGGAGGGAATTGCGAGTGTTAATTGTTA
 
. : . : . : . : . : . :
JMSF047P04+ AACCTTAAACCCATGTCTCT
JMSF022M06+ AACCTTAAACCCATGTCTCTTCAGATTTCAGATTTCAGATTTCAGATTTC
JMFN011P07+ AACCTTAAACCCATGTCTCT
JMSF047M18+ AACCTTAAACCCATGTCTCTTCAGATTTCAGATTTCAGATTTCAGATTTCAGATTTCCAA
                      ____________________________________________________________
consensus AACCTTAAACCCATGTCTCTTCAGATTTCAGATTTCAGATTTCAGATTTCAGATTTCCAA