Contig 009530:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038J09Sequence380009530 (3)771010000 (3)ref|XP_009591174.1|2e-112PREDICTED: putative transporter arsB [Nicotiana tomentosiformis] ref|XP_00959118
JMSF029J03Sequence701009530 (3)dbj|BAO52027.1|4e-88plasma membrane aluminum transporter [Hydrangea macrophylla]732010000 (3)ref|XP_009783592.1|7e-112PREDICTED: putative transporter arsB [Nicotiana sylvestris]
JMSF046A06Sequence793009530 (3)dbj|BAO52027.1|4e-97plasma membrane aluminum transporter [Hydrangea macrophylla]736010000 (3)ref|XP_006363328.1|4e-71PREDICTED: putative transporter arsB-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046A06+ TTGGAGTTGCAGA
                      ____________________________________________________________
consensus TTGGAGTTGCAGA
 
. : . : . : . : . : . :
JMSF029J03+ GAGCTAGCAGGAATGGGTGAGGCGGCAGATTCTG
JMSF046A06+ CGACCCGATGTTTGCACTCGAGGCAAGAGCTAGCAGGAATGGGTGAGGCGGCAGATTCTG
                      ____________________________________________________________
consensus CGACCCGATGTTTGCACTCGAGGCAAGAGCTAGCAGGAATGGGTGAGGCGGCAGATTCTG
 
. : . : . : . : . : . :
JMSF029J03+ TTGCCTCGCGATTTTCAGCACAAACTCTGTCAGCACCACACAAGACGTGTCGTTGGTGAA
JMSF046A06+ TTGCCTCGCGATTTTCAGCACAAACTCTGTCAGCACCACACAAGACGTGTCGTTGGTGAA
                      ____________________________________________________________
consensus TTGCCTCGCGATTTTCAGCACAAACTCTGTCAGCACCACACAAGACGTGTCGTTGGTGAA
 
. : . : . : . : . : . :
JMSF029J03+ TAGCGCACTGGAAATGGCAGAAATCAAGCAGATTCTGAACAGCAAATCCTTGGCTCCCTT
JMSF046A06+ TAGCGCACTGGAAATGGCAGAAATCAAGCAGATTCTGAACAGCAAATCCTTGGCTCCCTT
                      ____________________________________________________________
consensus TAGCGCACTGGAAATGGCAGAAATCAAGCAGATTCTGAACAGCAAATCCTTGGCTCCCTT
 
. : . : . : . : . : . :
JMSF029J03+ GCTCTTCCAGGCCAGCAATTTCCCCAGATACTTAAACATGTCTGCTCTTTCAAGATACAC
JMSF046A06+ GCTCTTCCAGGCCAGCAATTTCCCCAGATACTTAAACATGTCTGCTCTTTCAAGATACAC
                      ____________________________________________________________
consensus GCTCTTCCAGGCCAGCAATTTCCCCAGATACTTAAACATGTCTGCTCTTTCAAGATACAC
 
. : . : . : . : . : . :
JMSF029J03+ ACTCACAACCATTGTCCCAAACAGAAGCCCCAGAATATGAAGATCAATTGCAGCATAGGC
JMSF046A06+ ACTCACAACCATTGTCCCAAACAGAAGCCCCAGAATATGAAGATCAATTGCAGCATAGGC
                      ____________________________________________________________
consensus ACTCACAACCATTGTCCCAAACAGAAGCCCCAGAATATGAAGATCAATTGCAGCATAGGC
 
. : . : . : . : . : . :
JMSF029J03+ TTGTTCGGGCGTCAAAACCCGAAAAAGAACCATAAGCATAGCCCCAAGAAGAGACCCTGC
JMSF046A06+ TTGTTCGGGCGTCAAAACCCGAAAAAGAACCATAAGCATAGCCCCAAGAAGAGACCCTGC
                      ____________________________________________________________
consensus TTGTTCGGGCGTCAAAACCCGAAAAAGAACCATAAGCATAGCCCCAAGAAGAGACCCTGC
 
. : . : . : . : . : . :
JMSF029J03+ AGTCCTTCCAACCGGCATAAACGGAACAGCAGGAAAAACAGCCAACACCCAAAAGATTGC
JMFF038J09+ CAGCCAACACCCAAAAGATTGC
JMSF046A06+ AGTCCTTCCAACCGGCATAAACGGAACAGCAGGAAAAACAGCCAACACCCAAAAGATTGC
                      ____________________________________________________________
consensus AGTCCTTCCAACCGGCATAAACGGAACAGCAGGAAAAACAGCCAACACCCAAAAGATTGC
 
. : . : . : . : . : . :
JMSF029J03+ AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
JMFF038J09+ AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
JMSF046A06+ AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
                      ____________________________________________________________
consensus AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
 
. : . : . : . : . : . :
JMSF029J03+ TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
JMFF038J09+ TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
JMSF046A06+ TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
                      ____________________________________________________________
consensus TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
 
. : . : . : . : . : . :
JMSF029J03+ TGAAACTG
JMFF038J09+ TGAAACTGCAAAAAGATTGAATCTTTACTTGTTATTAGAACTATAATCAACAACTCCTAA
JMSF046A06+ TGAAACTGCAAAAAGATTGAATCTTTACTTGTTATTAGAACTATAATCAACAACTCCTAA
                      ____________________________________________________________
consensus TGAAACTGCAAAAAGATTGAATCTTTACTTGTTATTAGAACTATAATCAACAACTCCTAA
 
. : . : . : . : . : . :
JMFF038J09+ ACTAGGGTTGGCTTTATCATGTGAAGAACACAACATTTGACCATTTGAATCTCGTGTCCT
JMSF046A06+ ACTAGGGTTGGCTTTATCATGTGAAGAACACAACATTTGACCATTTGAATCTCGTGTCCT
                      ____________________________________________________________
consensus ACTAGGGTTGGCTTTATCATGTGAAGAACACAACATTTGACCATTTGAATCTCGTGTCCT
 
. : . : . : . : . : . :
JMFF038J09+ CTCTCTCTCACACACATAATTTTAATGGCTGAAGATGATGCCACGGCCTCATCTAACACA
JMSF046A06+ CTCTCTCTCACACACATAATTTTAATGGCTGAAGATGATGCCACGGCCTCATCTAACACA
                      ____________________________________________________________
consensus CTCTCTCTCACACACATAATTTTAATGGCTGAAGATGATGCCACGGCCTCATCTAACACA
 
. : . : . : . : . : . :
JMFF038J09+ TGACAGCACAACCCAAACTCTTTCCAAAGAATAAATGGATCCAGACACCTC
JMSF046A06+ TGACAGCACAACCCAAACTCTTTCCAAAGAATAAATGGATCCAGACACCTCAATGCCTCA
                      ____________________________________________________________
consensus TGACAGCACAACCCAAACTCTTTCCAAAGAATAAATGGATCCAGACACCTCAATGCCTCA