| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036P02 | Sequence | 506 | 009502 (7) | gb|KDP40307.1| | 3e-45 | hypothetical protein JCGZ_02305 [Jatropha curcas] | 716 | 009502 (7) | emb|CDO99210.1| | 2e-76 | unnamed protein product [Coffea canephora] |
| JMFF050D09 | Sequence | 618 | 009502 (7) | ref|XP_006379885.1| | 8e-65 | hypothetical protein POPTR_0008s16530g [Populus trichocarpa] gb|ERP57682.1| hypo | 549 | 009502 (7) | emb|CDO99210.1| | 6e-49 | unnamed protein product [Coffea canephora] |
| JMFN006E09 | Sequence | 637 | 009502 (7) | ref|XP_006379884.1| | 6e-81 | hypothetical protein POPTR_0008s16530g [Populus trichocarpa] gb|ERP57681.1| hypo | |||||
| JMSF042D01 | Sequence | 546 | 009502 (7) | ref|XP_006420908.1| | 1e-50 | hypothetical protein CICLE_v10005201mg [Citrus clementina] gb|ESR34148.1| hypoth | 752 | 009502 (7) | emb|CBI23595.3| | 5e-84 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF050D09- ATGAAAAATG
____________________________________________________________
consensus ATGAAAAATG
. : . : . : . : . : . :
rJMFF050D09- GACAGTACTTTATTTTGGATTGATACAGCCTACTTTATTTTTGCAATAAATTAATTAAAG
rJMFF036P02- ATTTTGGATTGATACAGCCTACTTTATTTTTGCAATAAATTAATTAAAG
rJMSF042D01- CCTACTTTATTTTTGCAATAAATTAATTAAAG
____________________________________________________________
consensus GACAGTACTTTATTTTGGATTGATACAGCCTACTTTATTTTTGCAATAAATTAATTAAAG
. : . : . : . : . : . :
rJMFF050D09- TCCATGCAGGCCACTACTAAGTTTGAACAGATAATAAAAACCAACAACAAACACTTAATA
rJMFF036P02- TCCATGCAGGCCACTACTAAGTTTGAACAGATAATAAAAACCAACAACAAACACTTAATA
rJMSF042D01- TCCATGCAGGCCACTACTAAGTTTGAACAGATAATAAAAACCAACAACAAACACTTAATA
____________________________________________________________
consensus TCCATGCAGGCCACTACTAAGTTTGAACAGATAATAAAAACCAACAACAAACACTTAATA
. : . : . : . : . : . :
rJMFF050D09- ATACAATTATAATCATTGTACTTCTGAATCTCCTTAATTAATTGCCTTCTTTCTGCAACC
rJMFF036P02- ATACAATTATAATCATTGTACTTCTGAACCTCCTTAATTAATTGCCTTCTTTCTGCAACC
rJMSF042D01- ATACAATTATAATCATTGTACTTCTGAATCTCCTTAATTAATTGCCTTCTTTCTGCAACC
____________________________________________________________
consensus ATACAATTATAATCATTGTACTTCTGAATCTCCTTAATTAATTGCCTTCTTTCTGCAACC
. : . : . : . : . : . :
rJMFF050D09- TAAACCTCAACAAGCCAGAGGTACCATCAAGCCCTTTCTTCTGGAAATGCATAAGGTATT
rJMFF036P02- TAAACCTCAACAAGCCAGAGGTACCATCAAGCCCTTTCTTCTGGAAATGCATAAGGTATT
rJMSF042D01- TAAACCTCAACAAGCCAGAGGTACCATCAAGCCCTTTCTTCTGGAAATGCATAAGGTATT
____________________________________________________________
consensus TAAACCTCAACAAGCCAGAGGTACCATCAAGCCCTTTCTTCTGGAAATGCATAAGGTATT
. : . : . : . : . : . :
rJMFF050D09- CCTCTGTGGTTGTCTCTCTATACAATGGAGGATTCTCATCAGAAACCAACTCCTTTATCG
rJMFF036P02- CCTCTGTGGTTGTCTCTCTATACAATGGAGGATTCTCATCAGAAACCAACTCCTTTATCG
rJMSF042D01- CCTCTGTGGTTGTCTCTCTATACAATGGAGGATTCTCATCAGAAACCAACTCCTTTATCG
____________________________________________________________
consensus CCTCTGTGGTTGTCTCTCTATACAATGGAGGATTCTCATCAGAAACCAACTCCTTTATCG
. : . : . : . : . : . :
rJMFF050D09- GTCCATATACTTTCTTGGCATCCACGTCACCGGGGATTGTTCTAAAGAAACTTGCAACTG
rJMFF036P02- GTCCATATACTTTCTTGGCATCCACGTCACCGGGGATTGTTCTAAAGAAACTTGCAACTG
rJMSF042D01- GTCCATATACTTTCTTGGCACCCACGTCACCGGGGATTGTTCTAAAGAAACTTGCAACTG
____________________________________________________________
consensus GTCCATATACTTTCTTGGCATCCACGTCACCGGGGATTGTTCTAAAGAAACTTGCAACTG
. : . : . : . : . : . :
rJMFF050D09- AAACTCTGGGGGCTATCTTTTGTGCTATTACTCTATGCACCACACTTTTGAACTTGTCAT
rJMFF036P02- AAACTCTGGGGGCTATCTTTTGTGCTATTACTCTATGCACCACACTTTTGAACTTGTCAT
rJMSF042D01- AAACTCTGGGGGCTATCTTTTGTGCTATTACTCTATGCACCACACTTTTGAACTTGTCAT
____________________________________________________________
consensus AAACTCTGGGGGCTATCTTTTGTGCTATTACTCTATGCACCACACTTTTGAACTTGTCAT
. : . : . : . : . : . :
rJMFF050D09- TTGTGATCAACTGCAGAAGATCAGCAACATTGACTACCAGAAGCCCATGCAATGGAGGGA
rJMFF036P02- TTGTGATCAACTGCAGAAGATCAGCAACATTGACTACCAGAGCCCCATGCAATGGAGGGA
rJMSF042D01- TTGTGATCAACTGCAGAAGATCAGCAACATTGACTACCAGAGCCCCATGCAATGGAGGGA
____________________________________________________________
consensus TTGTGATCAACTGCAGAAGATCAGCAACATTGACTACCAGAGCCCCATGCAATGGAGGGA
. : . : . : . : . : . :
rJMFF050D09- CATCAACCCATTGGTTTTCATGAAGAACCTGNAGGCCACCAATTTGAGTATCTTGATTT
rJMFF036P02- CATCAACCCATTGGTTTTCATGAAGAACCTGGAGGCCACCAATTTGAGTATCTTGATTTA
rJMSF042D01- CATCAACCCATTGGTTTTCATGAAGAACCTGGAGGCCACCAATTTGAGTATCTTGATTTA
____________________________________________________________
consensus CATCAACCCATTGGTTTTCATGAAGAACCTGGAGGCCACCAATTTGAGTATCTTGATTTA
. : . : . : . : . : . :
rJMFF036P02- GTACTGTAAAAAAACCACTGTCAGAATGGTCTCTAAGTGCAAACGTGAGCTCTGGTTCAG
rJMSF042D01- GTACTGTAAAAAAACCACTGTCAGAATGGTCTCTAAGTGCAAACGTGAGCTCTGGTTCAG
____________________________________________________________
consensus GTACTGTAAAAAAACCACTGTCAGAATGGTCTCTAAGTGCAAACGTGAGCTCTGGTTCAG
. : . : . : . : . : . :
rJMFF036P02- GGCAAGCCGGGTAGTACTGGCCGAAGATGGAAAGCCCCACAGCACACCCCAGTTTCTCCA
rJMSF042D01- GGCAAGCCGGGTAGTACTGGCCGAAGATGGAAAGCCCCACAGCACACCCCAGTTTCTCCA
____________________________________________________________
consensus GGCAAGCCGGGTAGTACTGGCCGAAGATGGAAAGCCCCACAGCACACCCCAGTTTCTCCA
. : . : . : . : . : . :
rJMFF036P02- GATGGTTTTTGTGCANGCCCAGTGACTCTGAGAACAATTCCAATAGACACAGCCCAAGTT
rJMSF042D01- GATGGTTTTTGTGCAGGCCCAGTGACTCTGAGAACAATTCCAATAGACACAGCCCAAGTT
JMFN006E09+ TGCAGGCCCAGTGACTCTGAGAACAATTCCAATAGACACAGCCCAAGTT
JMFF050D09+ T
____________________________________________________________
consensus GATGGTTTTTGTGCAGGCCCAGTGACTCTGAGAACAATTCCAATAGACACAGCCCAAGTT
. : . : . : . : . : . :
rJMFF036P02- TTTGCAC
rJMSF042D01- TTTGCACAGAGTTGGAGTATTTTATCAGTATGTCCCTGCATACTTGTGGCAATTCT
JMFN006E09+ TTTGCACAGAGTTGGAGTATTTTATCAGTATGTCCCTGCATACTTGTGGCAATTCTTGAG
JMFF050D09+ TTTGCACAGAGTTGGAGTATTTTATCAGTATGTCCCTGCATACTNGTGGCAATTCTGNAG
____________________________________________________________
consensus TTTGCACAGAGTTGGAGTATTTTATCAGTATGTCCCTGCATACTTGTGGCAATTCTTGAG
. : . : . : . : . : . :
JMFN006E09+ GCGTAGGAGGATGAGGAGCCATGATAAAATAAAGGGTATCCCTCCAAGTTGCTGCCGGTG
JMFF050D09+ GCGTAGGAGGATGAGGAGCCATGATAAAATAAAGGGTATCCCTCCAAGTTGCTGCCGGTG
JMSF042D01+ CCGGTG
____________________________________________________________
consensus GCGTAGGAGGATGAGGAGCCATGATAAAATAAAGGGTATCCCTCCAAGTTGCTGCCGGTG
. : . : . : . : . : . :
JMFN006E09+ AAGTATGAAAATCAAAGTTGGTGTTGTATACTACTTTTCTGGTGAGATCGCGGGAGTAGA
JMFF050D09+ AAGTATGAAAATCAAAGTTGGTGTTGTAAACTACTTTTCTGGTGAGATCGCGGGAGTAGA
JMFF036P02+ TGTATACTACTTTTCTGGTGAGATCGCGGGAGTAGA
JMSF042D01+ AAGTATGAAAATCAAAGTTGGTGTTGTATACTACTTTTCTGGTGAGATCGCGGGAGTAGA
____________________________________________________________
consensus AAGTATGAAAATCAAAGTTGGTGTTGTATACTACTTTTCTGGTGAGATCGCGGGAGTAGA
. : . : . : . : . : . :
JMFN006E09+ ACTGTTTCTTCACCTCAGAGTCCAGCTCGTGAAACTGACGAACGCCGTCAATCATTTCAT
JMFF050D09+ ACTGTTTCTTCACCTCAGAGTCCAGCTCGTGAAACTGACGAACGCCGTCAATCATTTCAT
JMFF036P02+ ACTGTTTCTTCACCTCAGAGTCCAGCTCGTGAAACTGACGAACGCCGTCAATCATTTCAT
JMSF042D01+ ACTGTTTCTTCACCTCAGAGTCCAGCTCGTGAAACTGACGAACGCCGTCAATCATTTCAT
____________________________________________________________
consensus ACTGTTTCTTCACCTCAGAGTCCAGCTCGTGAAACTGACGAACGCCGTCAATCATTTCAT
. : . : . : . : . : . :
JMFN006E09+ CAAGAACTTGAGTGGGAATCCCATGATTGATAATCTGAAAGAAACCCCAGGTTTGACATG
JMFF050D09+ CAAGAACTTGAGTGGGAATCCCATGATTGATAATCTGAAAGAAACCCCAGGTTTGACATG
JMFF036P02+ CAAGAACTTGAGTGGGAATCCCATGATTGATAATCTGAAAGAAACCCCAGGTTTGACATG
JMSF042D01+ CAAGAACTTGAGTGGGAATCCCATGATTGATAATCTGAAAGAAACCCCAGGTTTGACATG
____________________________________________________________
consensus CAAGAACTTGAGTGGGAATCCCATGATTGATAATCTGAAAGAAACCCCAGGTTTGACATG
. : . : . : . : . : . :
JMFN006E09+ CATCCCTGATTTCTTTGATGATTTCAGAACGGCGAGTTGTGTGGTCGGTATGGAGGCCTT
JMFF050D09+ CATCCCTGATTTCTTTGATGATTTCAGAACGGCGAGTTGTGTGGTCGGTATGGAGGCCTT
JMFF036P02+ CATCCCTGATTTCTTTGATGATTTCAGAACGGCGAGTTGTGTGGTCGGTATGGAGGCCTT
JMSF042D01+ CATCCCTGATTTCTTTGATGATTTCAGAACGGCGAGTTGTGTGGTCGGTATGGAGGCCTT
____________________________________________________________
consensus CATCCCTGATTTCTTTGATGATTTCAGAACGGCGAGTTGTGTGGTCGGTATGGAGGCCTT
. : . : . : . : . : . :
JMFN006E09+ CCATGTCTATGATGGGAACCTTGTACGTACTGGCCATGGCGGGCTTCAATTTCTCCTTCT
JMFF050D09+ CCATGTCTATGATGGGAACCTTGTACGTACTGGCCATGGCGGGCTTCAATTTCTCCTTCT
JMFF036P02+ CCATGTCTATGATGGGAACCTTGTACGTACTGGCCATGGCGGGCTTCAATTTCTCCTTCT
JMSF042D01+ CCATGTCTATGATGGGAACCTTGTACGTACTGGCCATGGCGGGCTTCAATTTCTCCTTCT
____________________________________________________________
consensus CCATGTCTATGATGGGAACCTTGTACGTACTGGCCATGGCGGGCTTCAATTTCTCCTTCT
. : . : . : . : . : . :
JMFN006E09+ CCTCTTTCTTGATTTCATCATGAATGAATATTCGTGGGATTTTCATTATTCCAGAATCTA
JMFF050D09+ CCTCTTTCTTGATTTCATCATGAATGAATATTCGTGGGATTTTCATTATTCCAGAATCTA
JMFF036P02+ CCTCTTTCTTGATTTCATCATGAATGAATATTCGTGGGATTTTCATTATTCCAGAATCTA
JMSF042D01+ CCTCTTTCTTGATTTCATCATGAATGAATATTCGTGGGATTTTCATTATTCCAGAATCTA
____________________________________________________________
consensus CCTCTTTCTTGATTTCATCATGAATGAATATTCGTGGGATTTTCATTATTCCAGAATCTA
. : . : . : . : . : . :
JMFN006E09+ CATGCCCCTTTACCCCGGTTTTCATGTCATCAAAGGCTTTCAGCTCGCTTTTCCGATCAT
JMFF050D09+ CATGCCCCTTTACCCCGGTTTTCATGTCATCAAAGGCTTTCAGCTCGCTTTTCCGATCAT
JMFF036P02+ CATGCCCCTTTACCCCGGTTTTCATGTCATCAAAGGCTTTCAGCTCGCTTTTCCGATCAT
JMSF042D01+ CATGCCCCTTTACCCCGGTTTTCATGTCATCAAAGGCTTTCAGCTCGCTTTTCCGATCAT
____________________________________________________________
consensus CATGCCCCTTTACCCCGGTTTTCATGTCATCAAAGGCTTTCAGCTCGCTTTTCCGATCAT
. : . : . : . : . : . :
JMFN006E09+ AATCGCCGGAATCAGCTTTGCCGCCAGTGCTTGCGGTGGCCATCTCTC
JMFF050D09+ AATCGCCGGAATCAGCTTTGCCGCCAGTGCTTGCGGTGGCCATCTCTCTCTCTCTCTCTC
JMFF036P02+ AATCGCCGGAATCAGCTTTGCCGCCAGTGCTTGCGGTGGCCATCTCTCTCTCTCTCTCTC
JMSF042D01+ AATCGCCGGAATCAGCTTTGCCGCCAGTGCTTGCGGTGGCCATCTCTCTCTCTCTCTCTC
____________________________________________________________
consensus AATCGCCGGAATCAGCTTTGCCGCCAGTGCTTGCGGTGGCCATCTCTCTCTCTCTCTCTC
. : . : . : . : . : . :
JMFF050D09+ TCTC
JMFF036P02+ TCTCTTTCTCTGGAGCTTTAATTTGCTTGATTGATTGGCTATTTCAAA
JMSF042D01+ TCTCTTTCTCTGGAGCTTTAATTTGCTTGATTGATTGGCTATTTCAAACACTAAACCGCC
____________________________________________________________
consensus TCTCTTTCTCTGGAGCTTTAATTTGCTTGATTGATTGGCTATTTCAAACACTAAACCGCC