clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF033C03 | Sequence | 641 | 009501 (3) | ref|XP_009773504.1| | 113 | PREDICTED: uncharacterized protein LOC104223722 [Nicotiana sylvestris] | 692 | 004362 (5) | ref|XP_009773658.1| | 318 | PREDICTED: uncharacterized protein LOC104223852, partial [Nicotiana sylvestris] |
JMSF042C14 | Sequence | 778 | 009501 (3) | ref|XP_009773504.1| | 174 | PREDICTED: uncharacterized protein LOC104223722 [Nicotiana sylvestris] | 801 | 004362 (5) | ref|XP_009773658.1| | 330 | PREDICTED: uncharacterized protein LOC104223852, partial [Nicotiana sylvestris] |
JMSF048J14 | Sequence | 685 | 009501 (3) | ref|XP_009773504.1| | 129 | PREDICTED: uncharacterized protein LOC104223722 [Nicotiana sylvestris] | 774 | 004362 (5) | gb|KDO71027.1| | 8e-121 | hypothetical protein CISIN_1g011779mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF042C14+ AACAGCATCCAGCCATTTTCCAGCAACAGCAGTGTTTAAAACAACCAAGTCAGCTTTT
____________________________________________________________
consensus AACAGCATCCAGCCATTTTCCAGCAACAGCAGTGTTTAAAACAACCAAGTCAGCTTTT
. : . : . : . : . : . :
JMSF033C03+ TCGGTCCAGC
JMSF048J14+ TTCTTGACCCCTCGCAGGGAAAACCTGAACTCCTCGGTCCAGC
JMSF042C14+ AGAGCAGTATCTTTTGCTTCTTGACCCCTCGCAGGGAAAACCTGAACTCCTCGGTCCAGC
____________________________________________________________
consensus AGAGCAGTATCTTTTGCTTCTTGACCCCTCGCAGGGAAAACCTGAACTCCTCGGTCCAGC
. : . : . : . : . : . :
JMSF033C03+ ATTTTGTGTTCCAAACTGTATACAATATTATCTGTTTCAGCTGGCCTTTGATTTGTGATC
JMSF048J14+ ATTTTGTGTTCCAAACTGTATACAATATTATCTGTTTCAGCTGGCCTTTGATTTGTGATC
JMSF042C14+ ATTTTGTGTTCCAAACTGTATACAATATTATCTGTTTCAGCTGGCCTTTGATTTGTGATC
____________________________________________________________
consensus ATTTTGTGTTCCAAACTGTATACAATATTATCTGTTTCAGCTGGCCTTTGATTTGTGATC
. : . : . : . : . : . :
JMSF033C03+ CAACAGACTTCAGCACCAACACCCCTCAACAGAAAAGCCAGTTCCATCAACAAGAGAGGT
JMSF048J14+ CAACAGACTTCAGCACCAACACCCCTCAACAGAAAAGCCAGTTCCATCAACAAGAGAGGT
JMSF042C14+ CAACAGACTTCAGCACCAACACCCCTCAACAGAAAAGCCAGTTCCATCAACAAGAGAGGT
____________________________________________________________
consensus CAACAGACTTCAGCACCAACACCCCTCAACAGAAAAGCCAGTTCCATCAACAAGAGAGGT
. : . : . : . : . : . :
JMSF033C03+ CCGCCAGAAAGAGAGAGCTCATGTGAAACCAGAAGCACGAGCTTCGACTTCATGAAACTG
JMSF048J14+ CCGCCAGAAAGAGAGAGCTCATGTGAAACCAGAAGCACGAGCTTCGACTTCATGAAACTG
JMSF042C14+ CCGCCAGAAAGAGAGAGCTCATGTGAAACCAGAAGCACGAGCTTCGACTTCATGAAACTG
____________________________________________________________
consensus CCGCCAGAAAGAGAGAGCTCATGTGAAACCAGAAGCACGAGCTTCGACTTCATGAAACTG
. : . : . : . : . : . :
JMSF033C03+ AGCGGGCTCTGACGTACACCAGCAGGCGCAATCTGCTTAGACACTTCCACATTAGCACCA
JMSF048J14+ AGCGGGCTCTGACGTACACCAGCAGGCGCAATCTGCTTAGACACTTCCACATTAGCACCA
JMSF042C14+ AGCGGGCTCTGACGTACACCAGCAGGCGCAATCTGCTTAGACACTTCCACATTAGCACCA
____________________________________________________________
consensus AGCGGGCTCTGACGTACACCAGCAGGCGCAATCTGCTTAGACACTTCCACATTAGCACCA
. : . : . : . : . : . :
JMSF033C03+ AATAGCTTCCCGGACCCCACCTCACTGCGGCAATCGCAGGCGGAGTCGATGCCGCCCCTT
JMSF048J14+ AATAGCTTCCCGGACCCCACCTCACTGCGGCAATCGCAGGCGGAGTCGATGCCGCCCCTT
JMSF042C14+ AATAGCTTCCCGGACCCCACCTCACTGCGGCAATCGCAGGCGGAGTCGATGCCGCCCCTT
____________________________________________________________
consensus AATAGCTTCCCGGACCCCACCTCACTGCGGCAATCGCAGGCGGAGTCGATGCCGCCCCTT
. : . : . : . : . : . :
JMSF033C03+ ATCAGAAAGGCAATGACTGTGGTGACGGAGAGCATGACAAGGAGAGCCACCACCATAAGC
JMSF048J14+ ATCAGAAAGGCAATGACTGTGGTGACGGAGAGCATGACAAGGAGAGCCACCACCATAAGC
JMSF042C14+ ATCAGAAAGGCAATGACTGTGGTGACGGAGAGCATGACAAGGAGAGCCACCACCATAAGC
____________________________________________________________
consensus ATCAGAAAGGCAATGACTGTGGTGACGGAGAGCATGACAAGGAGAGCCACCACCATAAGC
. : . : . : . : . : . :
JMSF033C03+ CAGCGCCGCTTCCGGAACAACGCCGACGTCGCGGAAGAATAAGGAGACTGAAGCTTCGCC
JMSF048J14+ CAGCGCCGCTTCCGGAACAACGCCGACGTCGCGGAAGAATAAGGAGACTGAAGCTTCGCC
JMSF042C14+ CAGCGCCGCTTCCGGAACAACGCCGACGTCGCGGAAGAATAAGGAGACTGAAGCTTCGCC
____________________________________________________________
consensus CAGCGCCGCTTCCGGAACAACGCCGACGTCGCGGAAGAATAAGGAGACTGAAGCTTCGCC
. : . : . : . : . : . :
JMSF033C03+ ATCCCAGTGGTGCTAGGGTTTGTTTGGTGGATCCCAGTCACGATAGACGGCATCTTAGGG
JMSF048J14+ ATCCCAGTGGTGCTAGGGTTTGTTTGGTGGATCCCAGTCACGATAGACGGCATCTTAGGG
JMSF042C14+ ATCCCAGTGGTGCTAGGGTTTGTTTGGTGGATCCCAGTCACGATAGACGGCATCTTAGGG
____________________________________________________________
consensus ATCCCAGTGGTGCTAGGGTTTGTTTGGTGGATCCCAGTCACGATAGACGGCATCTTAGGG
. : . : . : . : . : . :
JMSF033C03+ AAGCTGAATTTGGCGAGGAGGGATACTGTGCGTACATTTGTCTTTCACAGTCGACACTTG
JMSF048J14+ AAGCTGAATTTGGCGAGGAGGGATACTGTGCGTACATTTGTCTTTCACAGTCGACACTTG
JMSF042C14+ AAGCTGAATTTGGCGAGGAGGGATACTGTGCGTACATTTGTCTTTCACAGTCGACACTTG
____________________________________________________________
consensus AAGCTGAATTTGGCGAGGAGGGATACTGTGCGTACATTTGTCTTTCACAGTCGACACTTG
. : . : . : . : . : . :
JMSF033C03+ GAAGCTGCGGGGTCAAGGGGGTGTTTGCGGTGGCACTGTGAATCATTCACTTTCCGGCGG
JMSF048J14+ GAAGCTGCGGGGTCAAGGGGGTGTTTGCGGTGGCACTGTGAATCATTCACTTTCCGGCGG
JMSF042C14+ GAAGCTGCGGGGTCAAGGGGGTGTTTGCGGTGGCACTGTGAATCATTCACTTTCCGGCGG
____________________________________________________________
consensus GAAGCTGCGGGGTCAAGGGGGTGTTTGCGGTGGCACTGTGAATCATTCACTTTCCGGCGG
. : . : . : . : . : . :
JMSF033C03+ GTCGCCGCTTCACCGTCGATATGGTAAACT
JMSF048J14+ GTCGCCGCTTCACCGTCGATATGGTAAACTTTGATTAGA
JMSF042C14+ GTCGCCGCTTCACCGTCGATATGGTAAACTTTGATTAGATTATTCCTTTGCGCAATTCCA
____________________________________________________________
consensus GTCGCCGCTTCACCGTCGATATGGTAAACTTTGATTAGATTATTCCTTTGCGCAATTCCA