Contig 009495:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF038J12Sequence662009495 (4)emb|CDP02631.1|3e-79unnamed protein product [Coffea canephora]798009495 (4)emb|CDP02631.1|4e-114unnamed protein product [Coffea canephora]
JMSF041M09Sequence747009495 (4)emb|CDP02631.1|2e-71unnamed protein product [Coffea canephora]696009495 (4)ref|XP_007205732.1|2e-77hypothetical protein PRUPE_ppa010087mg [Prunus persica] gb|EMJ06931.1| hypotheti

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-                GATTTGCTGTATACTTACATATCTCCTTTGTATATGGACAGTGTTTTCAAGATA
rJMSF038J12-                GATTTGCTGTATACTTACATATCTCCTTTGTATATGGACAGTGTTTTCAAGATA
                      ____________________________________________________________
consensus                   GATTTGCTGTATACTTACATATCTCCTTTGTATATGGACAGTGTTTTCAAGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          TTTACATGAAAGCTAATATGTATGGAAACTGAACAAAGTTTATGCTATAACTCTGCAGGA
rJMSF038J12-          TTTACATGAAAGCTAATATGTATGGAAACTGAACAAAGTTTATGCTATAACTCTGCAGGA
                      ____________________________________________________________
consensus             TTTACATGAAAGCTAATATGTATGGAAACTGAACAAAGTTTATGCTATAACTCTGCAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          GATTGACATTCATTATGATCGCGTAACAGGAAGTTTGCAGCAGGCATTAAAGACGTCGTC
rJMSF038J12-          GATTGACATTCATTATGATCGCGTAACAGGAAGTTTGCAGCAGGCATTAAAGACGTCGTC
                      ____________________________________________________________
consensus             GATTGACATTCATTATGATCGCGTAACAGGAAGTTTGCAGCAGGCATTAAAGACGTCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          TAAGGGGGCGTGATCGCCAGTCCCTTCATCCTTCCGCGCATACAACAATTGCTTCCCTTT
rJMSF038J12-          TAAGGGGGCGTGATCGCCAGTCCCTTCATCCTTCCGCGCATACAACAATTGCTTCCCTTT
JMSF041M09+                                           TCCGCGCATACAACAATTGCTTCCCTTT
                      ____________________________________________________________
consensus             TAAGGGGGCGTGATCGCCAGTCCCTTCATCCTTCCGCGCATACAACAATTGCTTCCCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          AAACACAAGCATTCCTCCCTGTTGCAAGACACTGCTTCTGTCATCCGGGGTGGCAGCAAT
rJMSF038J12-          AAACACAAGCATTCCTCCCTGTTGCAAGACACTGCTTCTGTCATCCGGGGTGGCAGCAAT
JMSF038J12+                                                             TGGCAGCAAT
JMSF041M09+           AAACACAAGCATTCCTCCCTGTTGCAAGACACTGCTTCTGTCATCCGGGGTGGCAGCAAT
                      ____________________________________________________________
consensus             AAACACAAGCATTCCTCCCTGTTGCAAGACACTGCTTCTGTCATCCGGGGTGGCAGCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          GGTGTAGTTCTTATTAGCTTCTCGCAATTCTTTGAATCTGGAAAATACTTTGGTACTGGC
rJMSF038J12-          GGTGTAGTTCTTATTAGCTTCTCGCAATTCTTTGAATCTGGAAAATACTTTGGTACTGGC
JMSF038J12+           GGTGTAGTTCTTATTAGCTTCTCGCAATTCTTTGAATCTGGAAAATACTTTGGTACTGGC
JMSF041M09+           GGTGTAGTTCTTATTAGCTTCTCGCAATTCTTTGAATCTGGAAAATACTTTGGTACTGGC
                      ____________________________________________________________
consensus             GGTGTAGTTCTTATTAGCTTCTCGCAATTCTTTGAATCTGGAAAATACTTTGGTACTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          TGGGTTGAAAAAGGTGCGGCCAAGTCCATAGTACAAGCCTAGAACATCATAAGCCTTACG
rJMSF038J12-          TGGGTTGAAAAAGGTGCGGCCAAGTCCATAGTACAAGCCTAGAACATCATAAGCCTTACG
JMSF038J12+           TGGGTTGAAAAAGGTGCGGCCAAGTCCATAGTACAAGCCTAGAACATCATAAGCCTTACG
JMSF041M09+           TGGGTTGAAAAAGGTGCGGCCAAGTCCATAGTACAAGCCTAGAACATCATAAGCCTTACG
                      ____________________________________________________________
consensus             TGGGTTGAAAAAGGTGCGGCCAAGTCCATAGTACAAGCCTAGAACATCATAAGCCTTACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          GTCAGGATCAGCATACAGAGAATCCAATGGAAAAGGTAACCTTTCAGCAAGAATTTGAGC
rJMSF038J12-          GTCAGGATCAGCATACAGAGAATCCAATGGAAAAGGTAACCTTTCAGCAAGAATTTGAGC
JMSF038J12+           GTCAGGATCAGCATACAGAGAATCCAATGGAAAAGGTAACCTTTCAGCAAGAATTTGAGC
JMSF041M09+           GTCAGGATCAGCATACAGAGAATCCAATGGAAAAGGTAACCTTTCAGCAAGAATTTGAGC
                      ____________________________________________________________
consensus             GTCAGGATCAGCATACAGAGAATCCAATGGAAAAGGTAACCTTTCAGCAAGAATTTGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          TTTCTTAGGCTCGACTACACCGACAGCGATTAGCTTGGCACCGACAGAATCAAATCTGAA
rJMSF038J12-          TTTCTTAGGCTCGCCTACACCGACAGCGATTAGCTTGGCACCGACAGAATCAAATCTGAA
JMSF038J12+           TTTCTTAGGCTCGCCTACACCGACAGCGATTAGCTTGGCACCGACAGAATCAAATCTGAA
JMSF041M09+           TTTCTTAGGCTCGACTACACCGACAGCGATTAGCTTGGCACCGACAGAATCAAATCTGAA
                      ____________________________________________________________
consensus             TTTCTTAGGCTCGCCTACACCGACAGCGATTAGCTTGGCACCGACAGAATCAAATCTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          TTTAGAATCTCTCAGTGTTGATGCGAGTT-CCAGCAGCAAACACACCCAAAATGCCGCAG
rJMSF038J12-          TTTAGAATCTCTCAGTGTTGATGCGAGTTCCCAGCAGCAAACACACCCAAAATGCCGCAG
JMSF038J12+           TTTAGAATCTCTCAGTGTTGATGCGAGTTCCCAGCAGCAAACACACCCAAAATGCCGCAG
JMSF041M09+           TTTAGAATCTCTCAGTGTTGATGCGAGTT-CCAGCAGCAAACACACCCAAAATGCCGCAG
                      ____________________________________________________________
consensus             TTTAGAATCTCTCAGTGTTGATGCGAGTTCCCAGCAGCAAACACACCCAAAATGCCGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          AAGTGCTACAACAGCCACTCCCTCTTGTTGAT-CCACAGTTGCTTAAACTTGACGGGGCT
rJMSF038J12-          AAGTGCTACAACAGCCACTCCCTCTTGTTGATCCCACAGTTGCTTAAACTTGACGGGCTC
JMSF038J12+           AAGTGCTACAACAGCCACTCCCTCTTGTTGATCCCACAGTTGCTTAAACTTGACGGGCTC
JMSF041M09+           AAGTGCTACAACAGCCACTCCCTCTTGTTGATCCCACAGTTGCTTAAACTTGACGGGCTC
                      ____________________________________________________________
consensus             AAGTGCTACAACAGCCACTCCCTCTTGTTGATCCCACAGTTGCTTAAACTTGACGGGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF041M09-          CACCGTAGCACGAAATATACTGACTTCTCCA                             
rJMSF038J12-          ACCCGTAGCACGAAATATACTGACTTCTCCAAGAACATCGCTGATATCTTCGGAGAAAAC
JMSF038J12+           ACCCGTAGCACGAAATATACTGACTTCTCCAAGAACATCGCTGATATCTTCGGAGAAAAC
JMSF041M09+           ACCCGTAGCACGAAATATACTGACTTCTCCAAGAACATCGCTGATATCTTCGGAGAAAAC
                      ____________________________________________________________
consensus             ACCCGTAGCACGAAATATACTGACTTCTCCAAGAACATCGCTGATATCTTCGGAGAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF038J12-          AGCGGGAGAATTAGACGACGATTTAGCAGAAATTGGAGTTGATTTCCGAAAATGAAGAGC
JMSF038J12+           AGCGGGAGAATTAGACGACGATTTAGCAGAAATTGGAGTTGATTTCCGAAAATGAAGAGC
JMSF041M09+           AGCGGGAGAATTAGACGACGATTTAGCAGAAATTGGAGTTGATTTCCGAAAATGAAGAGC
                      ____________________________________________________________
consensus             AGCGGGAGAATTAGACGACGATTTAGCAGAAATTGGAGTTGATTTCCGAAAATGAAGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF038J12-          GGGATGGGAAATCCGAGTGGATGA                                    
JMSF038J12+           GGGATGGGAAATCCGAGTGGATGAAAGCGAAGAACAACGAGGCAGCTGAAACATTTGAGT
JMSF041M09+           GGGATGGGAAATCCGAGTGGATGAAAGCGAAGAACAACGAGGCAGCTGAAACATTTGAGT
                      ____________________________________________________________
consensus             GGGATGGGAAATCCGAGTGGATGAAAGCGAAGAACAACGAGGCAGCTGAAACATTTGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038J12+           GCTCGGAGAAGAACATGACAGCGTTCTGGGAGAAGGAGATATTATCATCGCCATTGCCAT
JMSF041M09+           GCTCGGAGAAGAACATGACAGCGTTCTGGGAGAAGGAGATATTATCATCGCCATTGCCAT
                      ____________________________________________________________
consensus             GCTCGGAGAAGAACATGACAGCGTTCTGGGAGAAGGAGATATTATCATCGCCATTGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038J12+           CGCCATTGCAGCTAACTGTCGTCAGAGATTTCAGGAGAGATGAATGGCAACC        
JMSF041M09+           CGCCATTGCAGCTAACTGTCGTCAGAGATTTCAGGAGAGATGAATGGCAACCGTCAACCC
                      ____________________________________________________________
consensus             CGCCATTGCAGCTAACTGTCGTCAGAGATTTCAGGAGAGATGAATGGCAACCGTCAACCC