Contig 009483:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN003E12Sequence561009483 (2)ref|XP_010521675.1|121PREDICTED: uncharacterized protein LOC104800546 [Tarenaya hassleriana]
JMSF039J02Sequence614009483 (2)ref|XP_010521675.1|121PREDICTED: uncharacterized protein LOC104800546 [Tarenaya hassleriana]643013149 (12)sp|Q03683.1|BIP3_TOBAC8e-68RecName: Full=Luminal-binding protein 3; Short=BiP 3; AltName: Full=78 kDa gluc

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN003E12+ CA
JMSF039J02+ TTTTTTTTTTGGCA
                      ____________________________________________________________
consensus TTTTTTTTTTGGCA
 
. : . : . : . : . : . :
JMFN003E12+ GAACAACAAATAAAAATTAATCAATTGATCAAGCTCAAACCAACTTATTAGAGTTCCAAA
JMSF039J02+ GAACAACAAATAAAAATTAATCAATTGATCAAGCTCAAACCAACTTATTAGAGTTCCAAA
                      ____________________________________________________________
consensus GAACAACAAATAAAAATTAATCAATTGATCAAGCTCAAACCAACTTATTAGAGTTCCAAA
 
. : . : . : . : . : . :
JMFN003E12+ TATTTAGTTTAACAGTGCTTACACTTATAATTGAACTCAACATTTGAACACAACAGAAAT
JMSF039J02+ TATTTAGTTTAACAGTGCTTACACTTATAATTGAACTCAACATTTGAACACAACAGAAAT
                      ____________________________________________________________
consensus TATTTAGTTTAACAGTGCTTACACTTATAATTGAACTCAACATTTGAACACAACAGAAAT
 
. : . : . : . : . : . :
JMFN003E12+ CACATTAACAAATGAGCATGAACACAATGCATCCAAAAGCAAATGTATCAAGCTGGAATC
JMSF039J02+ CACATTAACAAATGAGCATGAACACAATGCATCCAAAAGCAAATGTATCAAGCTGGAATC
                      ____________________________________________________________
consensus CACATTAACAAATGAGCATGAACACAATGCATCCAAAAGCAAATGTATCAAGCTGGAATC
 
. : . : . : . : . : . :
JMFN003E12+ ACAAAACCCACATTCAGTCATATGTCTACAACTTATAAGCAAGGAACAGTATATTATTCC
JMSF039J02+ ACAAAACCCACATTCAGTCATATGTCTACAACTTATAAGCAAGGAACAGTATATTATTCC
                      ____________________________________________________________
consensus ACAAAACCCACATTCAGTCATATGTCTACAACTTATAAGCAAGGAACAGTATATTATTCC
 
. : . : . : . : . : . :
JMFN003E12+ AAATAAGAAACAATGTCTTCATCATTTCTTTCTAGGAAAAGAGTTCCACAGTTGATGAGA
JMSF039J02+ AAATAAGAAACAATGTCTTCATCATTTCTTTCTAGGAAAAGAGTTCCACAGTTGATGAGA
                      ____________________________________________________________
consensus AAATAAGAAACAATGTCTTCATCATTTCTTTCTAGGAAAAGAGTTCCACAGTTGATGAGA
 
. : . : . : . : . : . :
JMFN003E12+ TCATTTTAATCCCACATCCTTCATTCCTTCTTTCCGATACCATTAGACATGTTGTAGATC
JMSF039J02+ TCATTTTAATCCCACATCCTTCATTCCTTCTTTCCGATACCATTAGACATGTTGTAGATC
                      ____________________________________________________________
consensus TCATTTTAATCCCACATCCTTCATTCCTTCTTTCCGATACCATTAGACATGTTGTAGATC
 
. : . : . : . : . : . :
JMFN003E12+ CCTCGTCCAATCATGTAAAGTGAAGAAACTGCCAATGCGAGTGGAATGGCGACTGAGGTA
JMSF039J02+ CCTCGTCCAATCATGTAAAGTGAAGAAACTGCCAATGCGAGTGGAATGGCGACTGAGGTA
                      ____________________________________________________________
consensus CCTCGTCCAATCATGTAAAGTGAAGAAACTGCCAATGCGAGTGGAATGGCGACTGAGGTA
 
. : . : . : . : . : . :
JMFN003E12+ ACCTTATCAAAAGGACCCTTCAGATAAGTGTGTTTGTGAATGCTCTGGTAATACCTTTGC
JMSF039J02+ ACCTTATCAAAAGGACCCTTCAGATAAGTGTGTTTGTGAATGCTCTGGTAATACCTTTGC
                      ____________________________________________________________
consensus ACCTTATCAAAAGGACCCTTCAGATAAGTGTGTTTGTGAATGCTCTGGTAATACCTTTGC
 
. : . : . : . : . : . :
JMFN003E12+ TTCTCAATAAGCTTCT
JMSF039J02+ TTCTCAATAAGCTTCTCTCTGGGCCTGAAGGGGGTTTCTGACTCTGACATCATTTACACA
                      ____________________________________________________________
consensus TTCTCAATAAGCTTCTCTCTGGGCCTGAAGGGGGTTTCTGACTCTGACATCATTTACACA
 
. : . : . : . : . : . :
JMSF039J02+ GAGGAGAGGAGAAGAGAGAGCGGTGGGGTAGTAACAGAGTAGACTCGATCAACGGGAAGC
                      ____________________________________________________________
consensus GAGGAGAGGAGAAGAGAGAGCGGTGGGGTAGTAACAGAGTAGACTCGATCAACGGGAAGC