Contig 009462:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS036C10Sequence434009462 (3)ref|XP_009784922.1|5e-24PREDICTED: uncharacterized protein At1g04910 isoform X1 [Nicotiana sylvestris]
JMFS036D01Sequence562009462 (3)ref|XP_009784922.1|1e-22PREDICTED: uncharacterized protein At1g04910 isoform X1 [Nicotiana sylvestris]
JMSF037C14Sequence245009462 (3)724009028 (3)gb|KCW79414.1|8e-55hypothetical protein EUGRSUZ_C00818 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS036D01+ CCCT
                      ____________________________________________________________
consensus CCCT
 
. : . : . : . : . : . :
JMFS036C10+ ACGCCCAAAGATCCAGTCTTTCTCCTTAAAT
JMFS036D01+ TGAGCTCCAATCCACCCAACCCCAAGTCCACGCCCAAAGATCCAGTCTTTCTCCTTAAAT
                      ____________________________________________________________
consensus TGAGCTCCAATCCACCCAACCCCAAGTCCACGCCCAAAGATCCAGTCTTTCTCCTTAAAT
 
. : . : . : . : . : . :
JMFS036C10+ ACACTCTCTGGATCACACTACTCAAGTGGGTCTGAGCTTGCCTCTTCTCCACCATCTGCT
JMFS036D01+ ACACTCTCTGGATCACACTACTCAAGTGGGTCTGAGCTTGCCTCTTCTCCACCATCTGCT
                      ____________________________________________________________
consensus ACACTCTCTGGATCACACTACTCAAGTGGGTCTGAGCTTGCCTCTTCTCCACCATCTGCT
 
. : . : . : . : . : . :
JMFS036C10+ CGAACCCATCGCCGGAAACGGGGCTGGCATTCCCCTCAGATCTAGGCGAGTTGAGGTTGA
JMFS036D01+ CGAACCCATCGCCGGAAACGGGGCTGGCATTCCCCTCAGATCTAGGCGAGTTGAGGTTGA
                      ____________________________________________________________
consensus CGAACCCATCGCCGGAAACGGGGCTGGCATTCCCCTCAGATCTAGGCGAGTTGAGGTTGA
 
. : . : . : . : . : . :
JMFS036C10+ GGTCAATCTCGTGGTGGGTGTTGAGCGAGGCAGAAGTATTGCCAGTGCTGTGAGAGGTCT
JMFS036D01+ GGTCAATCTCGTGGTGGGTGTTGAGCGAGGCAGAAGTATTGCCAGTGCTGTGAGAGGTCT
                      ____________________________________________________________
consensus GGTCAATCTCGTGGTGGGTGTTGAGCGAGGCAGAAGTATTGCCAGTGCTGTGAGAGGTCT
 
. : . : . : . : . : . :
JMFS036C10+ GATTGACGGCGGCGCCAGTGTTGTTGGAACGCTTGAAGGAGTGGGCTCGCCGGGTCATCG
JMFS036D01+ GATTGACGGCGGCGCCAGTGTTGTTGGAACGCTTGAAGGAGTGGGCTCGCCGGGTCATCG
                      ____________________________________________________________
consensus GATTGACGGCGGCGCCAGTGTTGTTGGAACGCTTGAAGGAGTGGGCTCGCCGGGTCATCG
 
. : . : . : . : . : . :
JMFS036C10+ AGGCCGCCGAGAATCTCGGGCTGTTGACCCGCGGCGAAACGCCATCCGTCGCCGTCGTGT
JMFS036D01+ AGGCCGCCGAGAATCTCGGGCTGTTGACCCGCGGCGAAACGCCATCCGTCGCCGTCGTGT
JMSF037C14+ CGTGT
                      ____________________________________________________________
consensus AGGCCGCCGAGAATCTCGGGCTGTTGACCCGCGGCGAAACGCCATCCGTCGCCGTCGTGT
 
. : . : . : . : . : . :
JMFS036C10+ GGTGGTGGTTGTTATGGTGGTGGCCCATGTCCCAGTATATACATATGTATGTATATATAT
JMFS036D01+ GGTGGTGGTTGTTATGGTGGTGGCCCATGTCCCAGTATATACATATGTATGTATATATAT
JMSF037C14+ GGTGGTGGTTGTTATGGTGGTGGCCCATGTCCCAGTATATACATATGTATGTATATATAT
                      ____________________________________________________________
consensus GGTGGTGGTTGTTATGGTGGTGGCCCATGTCCCAGTATATACATATGTATGTATATATAT
 
. : . : . : . : . : . :
JMFS036C10+ ACCTCTCTCTCTCTTCTATATGTATTGATCA
JMFS036D01+ ACCTCTCTCTCTCTTCTATATGTATTGATCAGCTGTGCCGTGAGCAAGGGGGTGGTGGAG
JMSF037C14+ ACCTCTCTCTCTCTTNTATATGTATTGATCAGCNGTGCCGTGAGCAAGGGGGTGGTGGAG
                      ____________________________________________________________
consensus ACCTCTCTCTCTCTTCTATATGTATTGATCAGCTGTGCCGTGAGCAAGGGGGTGGTGGAG
 
. : . : . : . : . : . :
JMFS036D01+ TTATGAAGAAATGATTGACATTAATGTCGGAAGATGGGCTGCCGATGGCAAAGCGAAAAG
JMSF037C14+ TTATGAAGAAANGATTGACATTAATGTCGGAAGATGGGCTGCCGATGGCAAAGCGAAAAG
                      ____________________________________________________________
consensus TTATGAAGAAATGATTGACATTAATGTCGGAAGATGGGCTGCCGATGGCAAAGCGAAAAG
 
. : . : . : . : . : . :
JMFS036D01+ ATGAGAGAGAGAGAGAGA
JMSF037C14+ ATGAGAGAGAGAGAGAGAGAGACTATGGTCTGAAAACAAAGAAAAATGGGGACGGAACTC
                      ____________________________________________________________
consensus ATGAGAGAGAGAGAGAGAGAGACTATGGTCTGAAAACAAAGAAAAATGGGGACGGAACTC