Contig 009461:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036P21Sequence517009461 (2)ref|XP_009771669.1|142PREDICTED: uncharacterized protein LOC104222176 [Nicotiana sylvestris]470009461 (2)ref|XP_009771669.1|142PREDICTED: uncharacterized protein LOC104222176 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036P21+ GGGACTCCGCAGTGTAAGAGAAGGTATTCAATTCGCA
JMSF036P21- GGGACTCCGCAGTGTAAGAGAAGGTATTCAATTCGCA
                      ____________________________________________________________
consensus GGGACTCCGCAGTGTAAGAGAAGGTATTCAATTCGCA
 
. : . : . : . : . : . :
rJMSF036P21+ GGCTTTGATTTCATTGCTGTCCTTTGCAATTTTCCCCAGAGTGAATGGCTACTGAAGGAG
JMSF036P21- GGCTTTGATTTCATTGCTGTCCTTTGCAATTTTCCCCAGAGTGAATGGCTACTGAAGGAG
                      ____________________________________________________________
consensus GGCTTTGATTTCATTGCTGTCCTTTGCAATTTTCCCCAGAGTGAATGGCTACTGAAGGAG
 
. : . : . : . : . : . :
rJMSF036P21+ GTAAACCTGAGGCACAAACCTCAGCTGCAGCTGTTAATATGGCAACGGCTTCATGCCGGA
JMSF036P21- GTAAACCTGAGGCACAAACCTCAGCTGCAGCTGTTAATATGGCAACGGCTTCATGCCGGA
                      ____________________________________________________________
consensus GTAAACCTGAGGCACAAACCTCAGCTGCAGCTGTTAATATGGCAACGGCTTCATGCCGGA
 
. : . : . : . : . : . :
rJMSF036P21+ AGAAGAAGTCTGAAAGTGCCACTTTTTTAGAAGATGTGAAAGATCATATTGACGAGTTCA
JMSF036P21- AGAAGAAGTCTGAAAGTGCCACTTTTTTAGAAGATGTGAAAGATCATATTGACGAGTTCA
                      ____________________________________________________________
consensus AGAAGAAGTCTGAAAGTGCCACTTTTTTAGAAGATGTGAAAGATCATATTGACGAGTTCA
 
. : . : . : . : . : . :
rJMSF036P21+ TACATGCTTCAATGGATGAACATAAAACGTGCTTCAAGAAAACTATCCAGAAGATGTTTG
JMSF036P21- TACATGCTTCAATGGATGAACATAAAACGTGCTTCAAGAAAACTATCCAGAAGATGTTTG
                      ____________________________________________________________
consensus TACATGCTTCAATGGATGAACATAAAACGTGCTTCAAGAAAACTATCCAGAAGATGTTTG
 
. : . : . : . : . : . :
rJMSF036P21+ GAATGTCGAAAGTTGTTGCTGAAAGAAATGCGGAAGTGAAGGAGGTTGAAAGCAAACTTC
JMSF036P21- GAATGTCGAAAGTTGTTGCTGAAAGAAATGCGGAAGTGAAGGAGGTTGAAAGCAAACTTC
                      ____________________________________________________________
consensus GAATGTCGAAAGTTGTTGCTGAAAGAAATGCGGAAGTGAAGGAGGTTGAAAGCAAACTTC
 
. : . : . : . : . : . :
rJMSF036P21+ CACTCCGGACAGTCATATCTGAATAGTAAATCCAGAGATGCAATTGCAAAAGAAAATCTT
JMSF036P21- CACTCCGGACAGTCATATCTGAATAGTAAATCCAGAGATGCAATTGCAAAAGAAAATCTT
                      ____________________________________________________________
consensus CACTCCGGACAGTCATATCTGAATAGTAAATCCAGAGATGCAATTGCAAAAGAAAATCTT
 
. : . : . : . : . : . :
rJMSF036P21+ TAATAAAAGCATCAACTAAATCTTTTCTATATGTATAATGGTTTGTGAATTCTGTGTGAG
JMSF036P21- TAATAAAAGCATCAACTAAATCTTTTCTATATGTATAATGGTTTGTGAATTCTGTGTGAG
                      ____________________________________________________________
consensus TAATAAAAGCATCAACTAAATCTTTTCTATATGTATAATGGTTTGTGAATTCTGTGTGAG
 
. : . : . : . : . : . :
rJMSF036P21+ TTTACT
JMSF036P21- TTTACTTGCTGCCTGTTCTTCAATTGAACACAAACTATCTGCTTGAGATTAAAAAAAAAA
                      ____________________________________________________________
consensus TTTACTTGCTGCCTGTTCTTCAATTGAACACAAACTATCTGCTTGAGATTAAAAAAAAAA